RNA–Protein interactions for RNA: ENST00000445770.3

LINC01949-201, Transcript of long intergenic non-protein coding RNA 1949, humanhuman

TSL 1 (best) BASIC

Gene LINC01949, Length 2,721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01949-201ENST00000445770 SCINQ9Y6U3 715 aa10.37□□□□□ -0.75
LINC01949-201ENST00000445770 DNM1LO00429 736 aa10.37□□□□□ -0.75
LINC01949-201ENST00000445770 LGR5O75473 907 aa10.37□□□□□ -0.75
LINC01949-201ENST00000445770 TTC4O95801 387 aa10.37□□□□□ -0.75
LINC01949-201ENST00000445770 KLRC2P26717 231 aa10.37□□□□□ -0.75
LINC01949-201ENST00000445770 CDKN2BP42772 138 aa10.37□□□□□ -0.75
LINC01949-201ENST00000445770 MMP13P45452 471 aa10.37□□□□□ -0.75
LINC01949-201ENST00000445770 PHKA2P46019 1235 aa10.37□□□□□ -0.75
LINC01949-201ENST00000445770 FAM133BQ5BKY9 247 aaKnown RBP10.37□□□□□ -0.75
LINC01949-201ENST00000445770 FAM47EQ6ZV65 393 aa10.37□□□□□ -0.75
LINC01949-201ENST00000445770 ARFGAP2Q8N6H7 521 aa10.37□□□□□ -0.75
LINC01949-201ENST00000445770 C7orf31Q8N865 590 aa10.37□□□□□ -0.75
LINC01949-201ENST00000445770 FAM71DQ8N9W8 422 aa10.37□□□□□ -0.75
LINC01949-201ENST00000445770 EXD1Q8NHP7 514 aa10.37□□□□□ -0.75
LINC01949-201ENST00000445770 TRIM11Q96F44 468 aa10.37□□□□□ -0.75
LINC01949-201ENST00000445770 KIF12Q96FN5 646 aa10.37□□□□□ -0.75
LINC01949-201ENST00000445770 FAM167AQ96KS9 214 aa10.37□□□□□ -0.75
LINC01949-201ENST00000445770 DPEP3Q9H4B8 488 aa10.37□□□□□ -0.75
LINC01949-201ENST00000445770 VPS37BQ9H9H4 285 aa10.37□□□□□ -0.75
LINC01949-201ENST00000445770 SNTG2Q9NY99 539 aa10.37□□□□□ -0.75
LINC01949-201ENST00000445770 CNTN6Q9UQ52 1028 aa10.37□□□□□ -0.75
LINC01949-201ENST00000445770 NME7Q9Y5B8 376 aa10.37□□□□□ -0.75
LINC01949-201ENST00000445770 hCG_1818297A0A087WSY0 165 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 TCP11X1B4DZS4 312 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 H0YHG0 523 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 H3BRB1 525 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 GOLGA8RI6L899 631 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 AVILO75366 819 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 PDGFRBP09619 1106 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 SMPD1P17405 629 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 MAGEA9P43362 315 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 EIF3BP55884 814 aaKnown RBP10.36□□□□□ -0.75
LINC01949-201ENST00000445770 PTPN11Q06124 597 aaPredicted RBP10.36□□□□□ -0.75
LINC01949-201ENST00000445770 HIC1Q14526 733 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 ERMARDQ5T6L9 678 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 C1orf228Q6PIY5 440 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 VSTM1Q6UX27 236 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 DPP9Q86TI2 863 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 XYLT1Q86Y38 959 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 SCUBE3Q8IX30 993 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 TCP11Q8WWU5 503 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 FAM129AQ9BZQ8 928 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 TUT1Q9H6E5 874 aaKnown RBP10.36□□□□□ -0.75
LINC01949-201ENST00000445770 WHRNQ9P202 907 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 SNX9Q9Y5X1 595 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 SBF1O95248 1867 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 CCL15-CCL14A0A0B4J2E2 113 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 ASAP2O43150 1006 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 HBP1O60381 514 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 NPTXRO95502 500 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 SNAI1O95863 264 aaPredicted RBP10.36□□□□□ -0.75
LINC01949-201ENST00000445770 BRAFP15056 766 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 MIPP30301 263 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 SSTR1P30872 391 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 SLC25A11Q02978 314 aaKnown RBP10.36□□□□□ -0.75
LINC01949-201ENST00000445770 PPIL2Q13356 520 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 SLMAPQ14BN4 828 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 CCNG2Q16589 344 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 CCL15Q16663 113 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 ZC3H12AQ5D1E8 599 aaKnown RBP10.36□□□□□ -0.75
LINC01949-201ENST00000445770 PPP1R15BQ5SWA1 713 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 TRIM72Q6ZMU5 477 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 PLPPR4Q7Z2D5 763 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 CCDC125Q86Z20 511 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 UNC45BQ8IWX7 931 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 CHMP6Q96FZ7 201 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 FAM81BQ96LP2 452 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 MRPL45Q9BRJ2 306 aaKnown RBP10.36□□□□□ -0.75
LINC01949-201ENST00000445770 C16orf70Q9BSU1 422 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 TRAIPQ9BWF2 469 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 NXF3Q9H4D5 531 aaKnown RBP10.36□□□□□ -0.75
LINC01949-201ENST00000445770 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.36□□□□□ -0.75
LINC01949-201ENST00000445770 PIH1D1Q9NWS0 290 aaKnown RBP10.36□□□□□ -0.75
LINC01949-201ENST00000445770 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.36□□□□□ -0.75
LINC01949-201ENST00000445770 PARP2Q9UGN5 583 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 KCNH4Q9UQ05 1017 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 NAALADL1Q9UQQ1 740 aa10.36□□□□□ -0.75
LINC01949-201ENST00000445770 SYNJ2BP-COX16A0A087WUM0 186 aa10.35□□□□□ -0.75
LINC01949-201ENST00000445770 C3orf70A6NLC5 250 aaPredicted RBP10.35□□□□□ -0.75
LINC01949-201ENST00000445770 CXCL11O14625 94 aa10.35□□□□□ -0.75
LINC01949-201ENST00000445770 SLC25A27O95847 323 aa10.35□□□□□ -0.75
LINC01949-201ENST00000445770 CALB1P05937 261 aa10.35□□□□□ -0.75
LINC01949-201ENST00000445770 ITIH2P19823 946 aa10.35□□□□□ -0.75
LINC01949-201ENST00000445770 OSBPP22059 807 aa10.35□□□□□ -0.75
LINC01949-201ENST00000445770 MAGEA4P43358 317 aa10.35□□□□□ -0.75
LINC01949-201ENST00000445770 CNGA2Q16280 664 aa10.35□□□□□ -0.75
LINC01949-201ENST00000445770 TFDP3Q5H9I0 405 aa10.35□□□□□ -0.75
LINC01949-201ENST00000445770 MARCH8Q5T0T0 291 aa10.35□□□□□ -0.75
LINC01949-201ENST00000445770 OR6B2Q6IFH4 312 aa10.35□□□□□ -0.75
LINC01949-201ENST00000445770 CTU1Q7Z7A3 348 aaKnown RBP10.35□□□□□ -0.75
LINC01949-201ENST00000445770 RFX6Q8HWS3 928 aa10.35□□□□□ -0.75
LINC01949-201ENST00000445770 CXorf38Q8TB03 319 aa10.35□□□□□ -0.75
LINC01949-201ENST00000445770 BRI3BPQ8WY22 251 aa10.35□□□□□ -0.75
LINC01949-201ENST00000445770 PGM2Q96G03 612 aa10.35□□□□□ -0.75
LINC01949-201ENST00000445770 ZNF317Q96PQ6 595 aaPredicted RBP10.35□□□□□ -0.75
LINC01949-201ENST00000445770 ALG13Q9NP73 1137 aaKnown RBP10.35□□□□□ -0.75
LINC01949-201ENST00000445770 NGRNQ9NPE2 291 aaKnown RBP10.35□□□□□ -0.75
LINC01949-201ENST00000445770 COX16Q9P0S2 106 aa10.35□□□□□ -0.75
LINC01949-201ENST00000445770 TSPAN16Q9UKR8 245 aa10.35□□□□□ -0.75
LINC01949-201ENST00000445770 CEP83Q9Y592 693 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms