RNA–Protein interactions for RNA: ENST00000445184.1

LINC01004-201, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 5 BASIC

Gene LINC01004, Length 686 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-201ENST00000445184 CXCR5P32302 372 aa4.84□□□□□ -1.63
LINC01004-201ENST00000445184 SOX8P57073 446 aa4.84□□□□□ -1.63
LINC01004-201ENST00000445184 ZACNQ401N2 412 aa4.84□□□□□ -1.63
LINC01004-201ENST00000445184 PABPC1LQ4VXU2 614 aaKnown RBP4.84□□□□□ -1.63
LINC01004-201ENST00000445184 CCDC157Q569K6 752 aa4.84□□□□□ -1.63
LINC01004-201ENST00000445184 FAM47AQ5JRC9 791 aa4.84□□□□□ -1.63
LINC01004-201ENST00000445184 KLHDC7AQ5VTJ3 777 aa4.84□□□□□ -1.63
LINC01004-201ENST00000445184 GADL1Q6ZQY3 521 aa4.84□□□□□ -1.63
LINC01004-201ENST00000445184 GRASPQ7Z6J2 395 aaPredicted RBP4.84□□□□□ -1.63
LINC01004-201ENST00000445184 LIX1LQ8IVB5 337 aa4.84□□□□□ -1.63
LINC01004-201ENST00000445184 SRRM1Q8IYB3 904 aaKnown RBP4.84□□□□□ -1.63
LINC01004-201ENST00000445184 SYTL1Q8IYJ3 562 aa4.84□□□□□ -1.63
LINC01004-201ENST00000445184 Q8N9P0 234 aaPredicted RBP4.84□□□□□ -1.63
LINC01004-201ENST00000445184 REPS2Q8NFH8 660 aa4.84□□□□□ -1.63
LINC01004-201ENST00000445184 ST8SIA2Q92186 375 aa4.84□□□□□ -1.63
LINC01004-201ENST00000445184 C18orf8Q96DM3 657 aa4.84□□□□□ -1.63
LINC01004-201ENST00000445184 ZNF512Q96ME7 567 aaPredicted RBP4.84□□□□□ -1.63
LINC01004-201ENST00000445184 COQ10AQ96MF6 247 aa4.84□□□□□ -1.63
LINC01004-201ENST00000445184 RMDN3Q96TC7 470 aa4.84□□□□□ -1.63
LINC01004-201ENST00000445184 P2RX7Q99572 595 aaKnown RBP4.84□□□□□ -1.63
LINC01004-201ENST00000445184 C1orf43Q9BWL3 253 aa4.84□□□□□ -1.63
LINC01004-201ENST00000445184 EIF2AQ9BY44 585 aaKnown RBP4.84□□□□□ -1.63
LINC01004-201ENST00000445184 LDAHQ9H6V9 325 aa4.84□□□□□ -1.63
LINC01004-201ENST00000445184 GPR35Q9HC97 309 aa4.84□□□□□ -1.63
LINC01004-201ENST00000445184 SERHLQ9NQF3 203 aa4.84□□□□□ -1.63
LINC01004-201ENST00000445184 NECTIN3Q9NQS3 549 aa4.84□□□□□ -1.63
LINC01004-201ENST00000445184 TM7SF3Q9NS93 570 aa4.84□□□□□ -1.63
LINC01004-201ENST00000445184 ANKFY1Q9P2R3 1169 aa4.84□□□□□ -1.63
LINC01004-201ENST00000445184 CAPN11Q9UMQ6 739 aa4.84□□□□□ -1.63
LINC01004-201ENST00000445184 ACTL7AQ9Y615 435 aa4.84□□□□□ -1.63
LINC01004-201ENST00000445184 EPN1Q9Y6I3 576 aaPredicted RBP4.84□□□□□ -1.63
LINC01004-201ENST00000445184 MBD3L4A6NDZ8 208 aaPredicted RBP4.83□□□□□ -1.64
LINC01004-201ENST00000445184 MBD3L3A6NE82 208 aaPredicted RBP4.83□□□□□ -1.64
LINC01004-201ENST00000445184 HNRNPDLO14979 420 aaKnown RBP4.83□□□□□ -1.64
LINC01004-201ENST00000445184 MT-ND5P03915 603 aa4.83□□□□□ -1.64
LINC01004-201ENST00000445184 JUNP05412 331 aaKnown RBP4.83□□□□□ -1.64
LINC01004-201ENST00000445184 SBK3P0C264 359 aa4.83□□□□□ -1.64
LINC01004-201ENST00000445184 SLC6A4P31645 630 aa4.83□□□□□ -1.64
LINC01004-201ENST00000445184 SERPINF1P36955 418 aa4.83□□□□□ -1.64
LINC01004-201ENST00000445184 ALDH1A3P47895 512 aa4.83□□□□□ -1.64
LINC01004-201ENST00000445184 PPM1FP49593 454 aaPredicted RBP4.83□□□□□ -1.64
LINC01004-201ENST00000445184 RPS16P62249 146 aaKnown RBP4.83□□□□□ -1.64
LINC01004-201ENST00000445184 BIRC3Q13489 604 aa4.83□□□□□ -1.64
LINC01004-201ENST00000445184 ARL13BQ3SXY8 428 aa4.83□□□□□ -1.64
LINC01004-201ENST00000445184 CCDC38Q502W7 563 aa4.83□□□□□ -1.64
LINC01004-201ENST00000445184 C3orf38Q5JPI3 329 aa4.83□□□□□ -1.64
LINC01004-201ENST00000445184 KHDC1LQ5JSQ8 128 aa4.83□□□□□ -1.64
LINC01004-201ENST00000445184 MFSD14BQ5SR56 506 aa4.83□□□□□ -1.64
LINC01004-201ENST00000445184 MMS22LQ6ZRQ5 1243 aa4.83□□□□□ -1.64
LINC01004-201ENST00000445184 PDSS2Q86YH6 399 aa4.83□□□□□ -1.64
LINC01004-201ENST00000445184 FAM9AQ8IZU1 332 aaPredicted RBP4.83□□□□□ -1.64
LINC01004-201ENST00000445184 SH2D3CQ8N5H7 860 aa4.83□□□□□ -1.64
LINC01004-201ENST00000445184 MYCT1Q8N699 235 aa4.83□□□□□ -1.64
LINC01004-201ENST00000445184 STT3BQ8TCJ2 826 aa4.83□□□□□ -1.64
LINC01004-201ENST00000445184 TRAPPC12Q8WVT3 735 aa4.83□□□□□ -1.64
LINC01004-201ENST00000445184 TBC1D20Q96BZ9 403 aa4.83□□□□□ -1.64
LINC01004-201ENST00000445184 SNX22Q96L94 193 aa4.83□□□□□ -1.64
LINC01004-201ENST00000445184 NDC1Q9BTX1 674 aa4.83□□□□□ -1.64
LINC01004-201ENST00000445184 ZNF518BQ9C0D4 1074 aa4.83□□□□□ -1.64
LINC01004-201ENST00000445184 C11orf54Q9H0W9 315 aaPredicted RBP4.83□□□□□ -1.64
LINC01004-201ENST00000445184 MAGEH1Q9H213 219 aa4.83□□□□□ -1.64
LINC01004-201ENST00000445184 ZNF768Q9H5H4 540 aaKnown RBP4.83□□□□□ -1.64
LINC01004-201ENST00000445184 TMEM140Q9NV12 185 aa4.83□□□□□ -1.64
LINC01004-201ENST00000445184 CPA4Q9UI42 421 aa4.83□□□□□ -1.64
LINC01004-201ENST00000445184 LRRFIP2Q9Y608 721 aaKnown RBP4.83□□□□□ -1.64
LINC01004-201ENST00000445184 A0A087WZ62 844 aa4.82□□□□□ -1.64
LINC01004-201ENST00000445184 BTN3A1O00481 513 aa4.82□□□□□ -1.64
LINC01004-201ENST00000445184 NRP1O14786 923 aa4.82□□□□□ -1.64
LINC01004-201ENST00000445184 NPHP1O15259 732 aa4.82□□□□□ -1.64
LINC01004-201ENST00000445184 NCAM2O15394 837 aa4.82□□□□□ -1.64
LINC01004-201ENST00000445184 PJA2O43164 708 aa4.82□□□□□ -1.64
LINC01004-201ENST00000445184 SKAP2O75563 359 aaPredicted RBP4.82□□□□□ -1.64
LINC01004-201ENST00000445184 ZFPL1O95159 310 aa4.82□□□□□ -1.64
LINC01004-201ENST00000445184 ITGA5P08648 1049 aa4.82□□□□□ -1.64
LINC01004-201ENST00000445184 DHRS4L1P0CG22 281 aa4.82□□□□□ -1.64
LINC01004-201ENST00000445184 GNAT2P19087 354 aa4.82□□□□□ -1.64
LINC01004-201ENST00000445184 BDNFP23560 247 aa4.82□□□□□ -1.64
LINC01004-201ENST00000445184 SMARCA1P28370 1054 aa4.82□□□□□ -1.64
LINC01004-201ENST00000445184 GABRB3P28472 473 aa4.82□□□□□ -1.64
LINC01004-201ENST00000445184 ABCG1P45844 678 aa4.82□□□□□ -1.64
LINC01004-201ENST00000445184 ARL4CP56559 192 aa4.82□□□□□ -1.64
LINC01004-201ENST00000445184 EXOSC9Q06265 439 aaKnown RBP4.82□□□□□ -1.64
LINC01004-201ENST00000445184 PTK2BQ14289 1009 aa4.82□□□□□ -1.64
LINC01004-201ENST00000445184 KRT40Q6A162 431 aa4.82□□□□□ -1.64
LINC01004-201ENST00000445184 PDZD4Q76G19 769 aaPredicted RBP4.82□□□□□ -1.64
LINC01004-201ENST00000445184 KRT28Q7Z3Y7 464 aa4.82□□□□□ -1.64
LINC01004-201ENST00000445184 ARHGEF19Q8IW93 802 aa4.82□□□□□ -1.64
LINC01004-201ENST00000445184 ZNF527Q8NB42 609 aa4.82□□□□□ -1.64
LINC01004-201ENST00000445184 OR6B3Q8NGW1 331 aa4.82□□□□□ -1.64
LINC01004-201ENST00000445184 CCT6BQ92526 530 aa4.82□□□□□ -1.64
LINC01004-201ENST00000445184 EID2BQ96D98 161 aa4.82□□□□□ -1.64
LINC01004-201ENST00000445184 CEP95Q96GE4 821 aa4.82□□□□□ -1.64
LINC01004-201ENST00000445184 SLC46A2Q9BY10 475 aa4.82□□□□□ -1.64
LINC01004-201ENST00000445184 CNNM1Q9NRU3 951 aa4.82□□□□□ -1.64
LINC01004-201ENST00000445184 MOCS1Q9NZB8 636 aa4.82□□□□□ -1.64
LINC01004-201ENST00000445184 GRHPRQ9UBQ7 328 aa4.82□□□□□ -1.64
LINC01004-201ENST00000445184 RIMBP3CA6NJZ7 1639 aa4.82□□□□□ -1.64
LINC01004-201ENST00000445184 RIMBP3BA6NNM3 1639 aa4.82□□□□□ -1.64
LINC01004-201ENST00000445184 RIMBP3Q9UFD9 1639 aa4.82□□□□□ -1.64
LINC01004-201ENST00000445184 TMEM200CA6NKL6 621 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms