RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 PCDHB4Q9Y5E5 795 aa15□□□□□ -0.01
SSBP3-208ENST00000444533 PLXNA3P51805 1871 aa14.99□□□□□ -0.01
SSBP3-208ENST00000444533 ZNF197O14709 1029 aa14.99□□□□□ -0.01
SSBP3-208ENST00000444533 HAPLN1P10915 354 aaPredicted RBP14.99□□□□□ -0.01
SSBP3-208ENST00000444533 KRT5P13647 590 aa14.99□□□□□ -0.01
SSBP3-208ENST00000444533 ZNF18P17022 549 aa14.99□□□□□ -0.01
SSBP3-208ENST00000444533 BDNFP23560 247 aa14.99□□□□□ -0.01
SSBP3-208ENST00000444533 PON1P27169 355 aa14.99□□□□□ -0.01
SSBP3-208ENST00000444533 MAGEA11P43364 429 aa14.99□□□□□ -0.01
SSBP3-208ENST00000444533 NCAPHQ15003 741 aa14.99□□□□□ -0.01
SSBP3-208ENST00000444533 SMAD2Q15796 467 aaKnown RBP14.99□□□□□ -0.01
SSBP3-208ENST00000444533 PABPC1LQ4VXU2 614 aaKnown RBP14.99□□□□□ -0.01
SSBP3-208ENST00000444533 TJAP1Q5JTD0 557 aa14.99□□□□□ -0.01
SSBP3-208ENST00000444533 RRAGAQ7L523 313 aa14.99□□□□□ -0.01
SSBP3-208ENST00000444533 LUZP1Q86V48 1076 aa14.99□□□□□ -0.01
SSBP3-208ENST00000444533 LMO3Q8TAP4 145 aa14.99□□□□□ -0.01
SSBP3-208ENST00000444533 ACSF2Q96CM8 615 aaPredicted RBP14.99□□□□□ -0.01
SSBP3-208ENST00000444533 SMARCD1Q96GM5 515 aa14.99□□□□□ -0.01
SSBP3-208ENST00000444533 CEP295NLQ96MC4 621 aa14.99□□□□□ -0.01
SSBP3-208ENST00000444533 DPEP3Q9H4B8 488 aa14.99□□□□□ -0.01
SSBP3-208ENST00000444533 CRTAC1Q9NQ79 661 aa14.99□□□□□ -0.01
SSBP3-208ENST00000444533 KIAA1257Q9ULG3 409 aa14.99□□□□□ -0.01
SSBP3-208ENST00000444533 DAAM1Q9Y4D1 1078 aa14.99□□□□□ -0.01
SSBP3-208ENST00000444533 MTCL1Q9Y4B5 1905 aaKnown RBP14.98□□□□□ -0.01
SSBP3-208ENST00000444533 LRRC10BA6NIK2 292 aa14.98□□□□□ -0.01
SSBP3-208ENST00000444533 LGALS16A8MUM7 142 aa14.98□□□□□ -0.01
SSBP3-208ENST00000444533 HCRTO43612 131 aa14.98□□□□□ -0.01
SSBP3-208ENST00000444533 LRRN2O75325 713 aa14.98□□□□□ -0.01
SSBP3-208ENST00000444533 CSH1P0DML2 217 aa14.98□□□□□ -0.01
SSBP3-208ENST00000444533 CSH2P0DML3 217 aa14.98□□□□□ -0.01
SSBP3-208ENST00000444533 CD19P15391 556 aa14.98□□□□□ -0.01
SSBP3-208ENST00000444533 SLC9A1P19634 815 aa14.98□□□□□ -0.01
SSBP3-208ENST00000444533 CYP2F1P24903 491 aa14.98□□□□□ -0.01
SSBP3-208ENST00000444533 KCNQ1P51787 676 aa14.98□□□□□ -0.01
SSBP3-208ENST00000444533 IQCB1Q15051 598 aa14.98□□□□□ -0.01
SSBP3-208ENST00000444533 SGO2Q562F6 1265 aa14.98□□□□□ -0.01
SSBP3-208ENST00000444533 SMYD5Q6GMV2 418 aa14.98□□□□□ -0.01
SSBP3-208ENST00000444533 TMEM270Q6UE05 265 aa14.98□□□□□ -0.01
SSBP3-208ENST00000444533 PDZD4Q76G19 769 aaPredicted RBP14.98□□□□□ -0.01
SSBP3-208ENST00000444533 GRASPQ7Z6J2 395 aaPredicted RBP14.98□□□□□ -0.01
SSBP3-208ENST00000444533 CYFIP2Q96F07 1278 aa14.98□□□□□ -0.01
SSBP3-208ENST00000444533 ARID3AQ99856 593 aa14.98□□□□□ -0.01
SSBP3-208ENST00000444533 CORO1BQ9BR76 489 aa14.98□□□□□ -0.01
SSBP3-208ENST00000444533 PHF7Q9BWX1 381 aaPredicted RBP14.98□□□□□ -0.01
SSBP3-208ENST00000444533 TMLHEQ9NVH6 421 aa14.98□□□□□ -0.01
SSBP3-208ENST00000444533 UXTQ9UBK9 157 aaPredicted RBP14.98□□□□□ -0.01
SSBP3-208ENST00000444533 HESX1Q9UBX0 185 aa14.98□□□□□ -0.01
SSBP3-208ENST00000444533 PRKAG3Q9UGI9 489 aa14.98□□□□□ -0.01
SSBP3-208ENST00000444533 CLUHO75153 1309 aa14.97□□□□□ -0.01
SSBP3-208ENST00000444533 PAEPP09466 180 aa14.97□□□□□ -0.01
SSBP3-208ENST00000444533 FAM200BP0CF97 657 aa14.97□□□□□ -0.01
SSBP3-208ENST00000444533 FSHRP23945 695 aa14.97□□□□□ -0.01
SSBP3-208ENST00000444533 USP8P40818 1118 aa14.97□□□□□ -0.01
SSBP3-208ENST00000444533 CDR1P51861 262 aa14.97□□□□□ -0.01
SSBP3-208ENST00000444533 ZNF445P59923 1031 aa14.97□□□□□ -0.01
SSBP3-208ENST00000444533 ORC1Q13415 861 aa14.97□□□□□ -0.01
SSBP3-208ENST00000444533 RAPGEF1Q13905 1077 aa14.97□□□□□ -0.01
SSBP3-208ENST00000444533 STILQ15468 1287 aa14.97□□□□□ -0.01
SSBP3-208ENST00000444533 ARHGAP44Q17R89 818 aa14.97□□□□□ -0.01
SSBP3-208ENST00000444533 PHLDB3Q6NSJ2 640 aa14.97□□□□□ -0.01
SSBP3-208ENST00000444533 OTOP3Q7RTS5 596 aa14.97□□□□□ -0.01
SSBP3-208ENST00000444533 ARHGEF19Q8IW93 802 aa14.97□□□□□ -0.01
SSBP3-208ENST00000444533 NEK11Q8NG66 645 aa14.97□□□□□ -0.01
SSBP3-208ENST00000444533 SUSD6Q92537 303 aa14.97□□□□□ -0.01
SSBP3-208ENST00000444533 PSMG2Q969U7 264 aa14.97□□□□□ -0.01
SSBP3-208ENST00000444533 ZNF707Q96C28 371 aaPredicted RBP14.97□□□□□ -0.01
SSBP3-208ENST00000444533 PKMYT1Q99640 499 aa14.97□□□□□ -0.01
SSBP3-208ENST00000444533 LSM14BQ9BX40 385 aaKnown RBP14.97□□□□□ -0.01
SSBP3-208ENST00000444533 WDR6Q9NNW5 1121 aaKnown RBP14.97□□□□□ -0.01
SSBP3-208ENST00000444533 DMAP1Q9NPF5 467 aaPredicted RBP14.97□□□□□ -0.01
SSBP3-208ENST00000444533 FAM49BQ9NUQ9 324 aa14.97□□□□□ -0.01
SSBP3-208ENST00000444533 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.97□□□□□ -0.01
SSBP3-208ENST00000444533 HMGXB4Q9UGU5 601 aa14.97□□□□□ -0.01
SSBP3-208ENST00000444533 MED7O43513 233 aa14.96□□□□□ -0.01
SSBP3-208ENST00000444533 AP1G2O75843 785 aa14.96□□□□□ -0.01
SSBP3-208ENST00000444533 SOAT2O75908 522 aa14.96□□□□□ -0.01
SSBP3-208ENST00000444533 RHOP08100 348 aa14.96□□□□□ -0.01
SSBP3-208ENST00000444533 VDRP11473 427 aa14.96□□□□□ -0.01
SSBP3-208ENST00000444533 ATP1A3P13637 1013 aa14.96□□□□□ -0.01
SSBP3-208ENST00000444533 ADORA2BP29275 332 aa14.96□□□□□ -0.01
SSBP3-208ENST00000444533 RAD23BP54727 409 aa14.96□□□□□ -0.01
SSBP3-208ENST00000444533 ARHGAP15Q53QZ3 475 aa14.96□□□□□ -0.01
SSBP3-208ENST00000444533 FAM35AQ86V20 835 aa14.96□□□□□ -0.01
SSBP3-208ENST00000444533 PLCD3Q8N3E9 789 aa14.96□□□□□ -0.01
SSBP3-208ENST00000444533 TTC9BQ8N6N2 239 aa14.96□□□□□ -0.01
SSBP3-208ENST00000444533 TDRD5Q8NAT2 981 aaKnown RBP14.96□□□□□ -0.01
SSBP3-208ENST00000444533 RBBP8NLQ8NC74 664 aaPredicted RBP14.96□□□□□ -0.01
SSBP3-208ENST00000444533 SLC2A14Q8TDB8 520 aa14.96□□□□□ -0.01
SSBP3-208ENST00000444533 GIPC2Q8TF65 315 aa14.96□□□□□ -0.01
SSBP3-208ENST00000444533 C8orf48Q96LL4 319 aa14.96□□□□□ -0.01
SSBP3-208ENST00000444533 HNRNPABQ99729 332 aaKnown RBP14.96□□□□□ -0.01
SSBP3-208ENST00000444533 B3GNT5Q9BYG0 378 aa14.96□□□□□ -0.01
SSBP3-208ENST00000444533 POMKQ9H5K3 350 aa14.96□□□□□ -0.01
SSBP3-208ENST00000444533 PLCB1Q9NQ66 1216 aa14.96□□□□□ -0.01
SSBP3-208ENST00000444533 KRT82Q9NSB4 513 aa14.96□□□□□ -0.01
SSBP3-208ENST00000444533 DNAJC12Q9UKB3 198 aa14.96□□□□□ -0.01
SSBP3-208ENST00000444533 MAGED2Q9UNF1 606 aaPredicted RBP14.96□□□□□ -0.01
SSBP3-208ENST00000444533 MRPS23Q9Y3D9 190 aaKnown RBP14.96□□□□□ -0.01
SSBP3-208ENST00000444533 CLDN5O00501 218 aa14.95□□□□□ -0.02
SSBP3-208ENST00000444533 PAPLNO95428 1278 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms