RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 RPRD1AQ96P16 312 aaPredicted RBP11.69□□□□□ -0.54
FN1-211ENST00000443816 PRPF18Q99633 342 aaKnown RBP11.69□□□□□ -0.54
FN1-211ENST00000443816 ELAC2Q9BQ52 826 aaKnown RBP11.69□□□□□ -0.54
FN1-211ENST00000443816 TMEM161AQ9NX61 479 aa11.69□□□□□ -0.54
FN1-211ENST00000443816 TPX2Q9ULW0 747 aaKnown RBP11.69□□□□□ -0.54
FN1-211ENST00000443816 A0A087WZ62 844 aa11.69□□□□□ -0.54
FN1-211ENST00000443816 FRMD3A2A2Y4 597 aa11.69□□□□□ -0.54
FN1-211ENST00000443816 MSH4O15457 936 aa11.69□□□□□ -0.54
FN1-211ENST00000443816 FLOT2Q14254 428 aa11.69□□□□□ -0.54
FN1-211ENST00000443816 GRIK4Q16099 956 aa11.69□□□□□ -0.54
FN1-211ENST00000443816 E4F1Q66K89 784 aaPredicted RBP11.69□□□□□ -0.54
FN1-211ENST00000443816 SLC20A1Q8WUM9 679 aa11.69□□□□□ -0.54
FN1-211ENST00000443816 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.69□□□□□ -0.54
FN1-211ENST00000443816 TRMT6Q9UJA5 497 aaKnown RBP11.69□□□□□ -0.54
FN1-211ENST00000443816 MEFVO15553 781 aaPredicted RBP11.69□□□□□ -0.54
FN1-211ENST00000443816 ERVK-9P63128 1117 aa11.69□□□□□ -0.54
FN1-211ENST00000443816 ERVK-24P63145 666 aa11.69□□□□□ -0.54
FN1-211ENST00000443816 Q4G0T1 1027 aa11.69□□□□□ -0.54
FN1-211ENST00000443816 TTC39BQ5VTQ0 682 aaPredicted RBP11.69□□□□□ -0.54
FN1-211ENST00000443816 IQSEC1Q6DN90 963 aa11.69□□□□□ -0.54
FN1-211ENST00000443816 TRIM65Q6PJ69 517 aa11.69□□□□□ -0.54
FN1-211ENST00000443816 SENP6Q9GZR1 1112 aaPredicted RBP11.69□□□□□ -0.54
FN1-211ENST00000443816 RAB23Q9ULC3 237 aa11.69□□□□□ -0.54
FN1-211ENST00000443816 DSG3P32926 999 aa11.69□□□□□ -0.54
FN1-211ENST00000443816 HDAC4P56524 1084 aa11.69□□□□□ -0.54
FN1-211ENST00000443816 CXCL9Q07325 125 aa11.69□□□□□ -0.54
FN1-211ENST00000443816 TLK2Q86UE8 772 aa11.69□□□□□ -0.54
FN1-211ENST00000443816 XPO6Q96QU8 1125 aaKnown RBP11.69□□□□□ -0.54
FN1-211ENST00000443816 MTMR12Q9C0I1 747 aa11.69□□□□□ -0.54
FN1-211ENST00000443816 BRD8Q9H0E9 1235 aa11.69□□□□□ -0.54
FN1-211ENST00000443816 UBXN8O00124 270 aa11.68□□□□□ -0.54
FN1-211ENST00000443816 CAMK2GQ13555 558 aaPredicted RBP11.68□□□□□ -0.54
FN1-211ENST00000443816 C1orf146Q5VVC0 180 aa11.68□□□□□ -0.54
FN1-211ENST00000443816 LRRC8EQ6NSJ5 796 aa11.68□□□□□ -0.54
FN1-211ENST00000443816 FRMD8Q9BZ67 464 aaPredicted RBP11.68□□□□□ -0.54
FN1-211ENST00000443816 KRCC1Q9NPI7 259 aaPredicted RBP11.68□□□□□ -0.54
FN1-211ENST00000443816 AKAP7Q9P0M2 348 aaPredicted RBP11.68□□□□□ -0.54
FN1-211ENST00000443816 FBXL5Q9UKA1 691 aa11.68□□□□□ -0.54
FN1-211ENST00000443816 TADA3O75528 432 aa11.68□□□□□ -0.54
FN1-211ENST00000443816 SETSIPP0DME0 302 aa11.68□□□□□ -0.54
FN1-211ENST00000443816 CHRM3P20309 590 aa11.68□□□□□ -0.54
FN1-211ENST00000443816 STOX1Q6ZVD7 989 aa11.68□□□□□ -0.54
FN1-211ENST00000443816 KIAA1683Q9H0B3 1180 aa11.68□□□□□ -0.54
FN1-211ENST00000443816 CCDC78A2IDD5 438 aa11.68□□□□□ -0.54
FN1-211ENST00000443816 SEC31AO94979 1220 aaKnown RBP11.68□□□□□ -0.54
FN1-211ENST00000443816 BRD2P25440 801 aaKnown RBP11.68□□□□□ -0.54
FN1-211ENST00000443816 TGM3Q08188 693 aa11.68□□□□□ -0.54
FN1-211ENST00000443816 NAB2Q15742 525 aa11.68□□□□□ -0.54
FN1-211ENST00000443816 HNRNPRO43390 633 aaKnown RBP11.68□□□□□ -0.54
FN1-211ENST00000443816 CAND2O75155 1236 aa11.68□□□□□ -0.54
FN1-211ENST00000443816 VDRP11473 427 aa11.68□□□□□ -0.54
FN1-211ENST00000443816 MYL4P12829 197 aa11.68□□□□□ -0.54
FN1-211ENST00000443816 DNAJB2P25686 324 aa11.68□□□□□ -0.54
FN1-211ENST00000443816 PPP2R2AP63151 447 aa11.68□□□□□ -0.54
FN1-211ENST00000443816 LAMTOR4Q0VGL1 99 aa11.68□□□□□ -0.54
FN1-211ENST00000443816 MFSD10Q14728 455 aa11.68□□□□□ -0.54
FN1-211ENST00000443816 FKBP1CQ5VVH2 108 aa11.68□□□□□ -0.54
FN1-211ENST00000443816 SLFN11Q7Z7L1 901 aa11.68□□□□□ -0.54
FN1-211ENST00000443816 ZNF410Q86VK4 478 aa11.68□□□□□ -0.54
FN1-211ENST00000443816 CEMIPQ8WUJ3 1361 aa11.68□□□□□ -0.54
FN1-211ENST00000443816 ITIH2P19823 946 aa11.68□□□□□ -0.54
FN1-211ENST00000443816 BOLA3Q53S33 107 aa11.68□□□□□ -0.54
FN1-211ENST00000443816 MAP1SQ66K74 1059 aaPredicted RBP11.68□□□□□ -0.54
FN1-211ENST00000443816 PCYOX1LQ8NBM8 494 aa11.68□□□□□ -0.54
FN1-211ENST00000443816 LIMA1Q9UHB6 759 aaKnown RBP11.68□□□□□ -0.54
FN1-211ENST00000443816 FHOD1Q9Y613 1164 aa11.68□□□□□ -0.54
FN1-211ENST00000443816 ADGRA2Q96PE1 1338 aa11.68□□□□□ -0.54
FN1-211ENST00000443816 STX7O15400 261 aaKnown RBP11.68□□□□□ -0.54
FN1-211ENST00000443816 PPM1LQ5SGD2 360 aa11.68□□□□□ -0.54
FN1-211ENST00000443816 ACAD10Q6JQN1 1059 aa11.68□□□□□ -0.54
FN1-211ENST00000443816 ACER1Q8TDN7 264 aa11.68□□□□□ -0.54
FN1-211ENST00000443816 CYTH2Q99418 400 aa11.68□□□□□ -0.54
FN1-211ENST00000443816 PI4K2AQ9BTU6 479 aa11.68□□□□□ -0.54
FN1-211ENST00000443816 TASP1Q9H6P5 420 aa11.68□□□□□ -0.54
FN1-211ENST00000443816 CYP4F11Q9HBI6 524 aa11.68□□□□□ -0.54
FN1-211ENST00000443816 EPB41L4AQ9HCS5 686 aaPredicted RBP11.68□□□□□ -0.54
FN1-211ENST00000443816 COL5A2P05997 1499 aaPredicted RBP11.67□□□□□ -0.54
FN1-211ENST00000443816 AKAP12Q02952 1782 aa11.67□□□□□ -0.54
FN1-211ENST00000443816 GTPBP10A4D1E9 387 aaKnown RBP11.67□□□□□ -0.54
FN1-211ENST00000443816 CAPZA2P47755 286 aa11.67□□□□□ -0.54
FN1-211ENST00000443816 RAP1GDS1P52306 607 aa11.67□□□□□ -0.54
FN1-211ENST00000443816 FAM83EQ2M2I3 478 aa11.67□□□□□ -0.54
FN1-211ENST00000443816 CENPPQ6IPU0 288 aa11.67□□□□□ -0.54
FN1-211ENST00000443816 ANKMY2Q8IV38 441 aa11.67□□□□□ -0.54
FN1-211ENST00000443816 DPF2Q92785 391 aa11.67□□□□□ -0.54
FN1-211ENST00000443816 MRPL1Q9BYD6 325 aaKnown RBP11.67□□□□□ -0.54
FN1-211ENST00000443816 CYP3A43Q9HB55 503 aa11.67□□□□□ -0.54
FN1-211ENST00000443816 AGPAT3Q9NRZ7 376 aa11.67□□□□□ -0.54
FN1-211ENST00000443816 SPASTQ9UBP0 616 aa11.67□□□□□ -0.54
FN1-211ENST00000443816 SMG5Q9UPR3 1016 aaKnown RBP11.67□□□□□ -0.54
FN1-211ENST00000443816 DTNAQ9Y4J8 743 aa11.67□□□□□ -0.54
FN1-211ENST00000443816 RNF103-CHMP3A0A140T963 221 aa11.67□□□□□ -0.54
FN1-211ENST00000443816 TRIM66O15016 1216 aa11.67□□□□□ -0.54
FN1-211ENST00000443816 CLCN3P51790 818 aa11.67□□□□□ -0.54
FN1-211ENST00000443816 PLCL1Q15111 1095 aa11.67□□□□□ -0.54
FN1-211ENST00000443816 BEND6Q5SZJ8 279 aaPredicted RBP11.67□□□□□ -0.54
FN1-211ENST00000443816 TADA1Q96BN2 335 aa11.67□□□□□ -0.54
FN1-211ENST00000443816 ASCC2Q9H1I8 757 aaPredicted RBP11.67□□□□□ -0.54
FN1-211ENST00000443816 ABCB6Q9NP58 842 aa11.67□□□□□ -0.54
FN1-211ENST00000443816 MEGF6O75095 1541 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms