RNA–Protein interactions for RNA: ENST00000443790.1

EDEM1-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-203ENST00000443790 RPL10AP62906 217 aaKnown RBP21.33■■□□□ 1.01
EDEM1-203ENST00000443790 SLC39A14Q15043 492 aa21.33■■□□□ 1.01
EDEM1-203ENST00000443790 DDR2Q16832 855 aa21.33■■□□□ 1.01
EDEM1-203ENST00000443790 TMEM196Q5HYL7 178 aa21.33■■□□□ 1.01
EDEM1-203ENST00000443790 TRIM68Q6AZZ1 485 aa21.33■■□□□ 1.01
EDEM1-203ENST00000443790 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.33■■□□□ 1.01
EDEM1-203ENST00000443790 OSTM1Q86WC4 334 aa21.33■■□□□ 1.01
EDEM1-203ENST00000443790 ADGRF2Q8IZF7 708 aa21.33■■□□□ 1.01
EDEM1-203ENST00000443790 TOP6BLQ8N6T0 577 aa21.33■■□□□ 1.01
EDEM1-203ENST00000443790 RIN3Q8TB24 985 aa21.33■■□□□ 1.01
EDEM1-203ENST00000443790 NOC3LQ8WTT2 800 aaKnown RBP21.33■■□□□ 1.01
EDEM1-203ENST00000443790 CHFRQ96EP1 664 aa21.33■■□□□ 1.01
EDEM1-203ENST00000443790 TRMT2BQ96GJ1 504 aaKnown RBP21.33■■□□□ 1.01
EDEM1-203ENST00000443790 ZNF396Q96N95 335 aaPredicted RBP21.33■■□□□ 1.01
EDEM1-203ENST00000443790 RTKNQ9BST9 563 aa21.33■■□□□ 1.01
EDEM1-203ENST00000443790 EBF3Q9H4W6 596 aa21.33■■□□□ 1.01
EDEM1-203ENST00000443790 PCIF1Q9H4Z3 704 aa21.33■■□□□ 1.01
EDEM1-203ENST00000443790 UXTQ9UBK9 157 aaPredicted RBP21.33■■□□□ 1.01
EDEM1-203ENST00000443790 SIX4Q9UIU6 781 aa21.33■■□□□ 1.01
EDEM1-203ENST00000443790 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.33■■□□□ 1.01
EDEM1-203ENST00000443790 OTOL1A6NHN0 477 aaPredicted RBP21.32■■□□□ 1
EDEM1-203ENST00000443790 NOL4O94818 638 aa21.32■■□□□ 1
EDEM1-203ENST00000443790 PRPF6O94906 941 aaKnown RBP21.32■■□□□ 1
EDEM1-203ENST00000443790 TMEM191BP0C7N4 346 aa21.32■■□□□ 1
EDEM1-203ENST00000443790 HOXC13P31276 330 aa21.32■■□□□ 1
EDEM1-203ENST00000443790 RBP5P82980 135 aa21.32■■□□□ 1
EDEM1-203ENST00000443790 ZNF268Q14587 947 aaPredicted RBP21.32■■□□□ 1
EDEM1-203ENST00000443790 STK38Q15208 465 aa21.32■■□□□ 1
EDEM1-203ENST00000443790 CCDC142Q17RM4 750 aa21.32■■□□□ 1
EDEM1-203ENST00000443790 PKN3Q6P5Z2 889 aa21.32■■□□□ 1
EDEM1-203ENST00000443790 WDR5BQ86VZ2 330 aa21.32■■□□□ 1
EDEM1-203ENST00000443790 GPD1LQ8N335 351 aa21.32■■□□□ 1
EDEM1-203ENST00000443790 MYRFLQ96LU7 910 aa21.32■■□□□ 1
EDEM1-203ENST00000443790 GTF3C4Q9UKN8 822 aa21.32■■□□□ 1
EDEM1-203ENST00000443790 GABRDO14764 452 aa21.31■■□□□ 1
EDEM1-203ENST00000443790 KIAA0391O15091 583 aaKnown RBP21.31■■□□□ 1
EDEM1-203ENST00000443790 HCRTO43612 131 aa21.31■■□□□ 1
EDEM1-203ENST00000443790 PCSK1P29120 753 aa21.31■■□□□ 1
EDEM1-203ENST00000443790 LHX1P48742 406 aa21.31■■□□□ 1
EDEM1-203ENST00000443790 GRSF1Q12849 480 aaKnown RBP eCLIP21.31■■□□□ 16e-10■■■□□ 16.6
EDEM1-203ENST00000443790 CFAP221Q4G0U5 840 aa21.31■■□□□ 1
EDEM1-203ENST00000443790 FSTL4Q6MZW2 842 aa21.31■■□□□ 1
EDEM1-203ENST00000443790 CC2D1AQ6P1N0 951 aaPredicted RBP21.31■■□□□ 1
EDEM1-203ENST00000443790 CCDC65Q8IXS2 484 aa21.31■■□□□ 1
EDEM1-203ENST00000443790 PDILTQ8N807 584 aa21.31■■□□□ 1
EDEM1-203ENST00000443790 FUBP3Q96I24 572 aaKnown RBP eCLIP21.31■■□□□ 1
EDEM1-203ENST00000443790 SEMA4GQ9NTN9 838 aa21.31■■□□□ 1
EDEM1-203ENST00000443790 PTPRJQ12913 1337 aa21.3■■□□□ 1
EDEM1-203ENST00000443790 ZNF638Q14966 1978 aaKnown RBP21.3■■□□□ 1
EDEM1-203ENST00000443790 TRDMT1O14717 391 aaKnown RBP21.3■■□□□ 1
EDEM1-203ENST00000443790 ARSAP15289 507 aa21.3■■□□□ 1
EDEM1-203ENST00000443790 NASPP49321 788 aaPredicted RBP21.3■■□□□ 1
EDEM1-203ENST00000443790 SOWAHAQ2M3V2 549 aa21.3■■□□□ 1
EDEM1-203ENST00000443790 LMBRD2Q68DH5 695 aaPredicted RBP21.3■■□□□ 1
EDEM1-203ENST00000443790 CEP68Q76N32 757 aa21.3■■□□□ 1
EDEM1-203ENST00000443790 SPATA2LQ8IUW3 424 aaPredicted RBP21.3■■□□□ 1
EDEM1-203ENST00000443790 NETO1Q8TDF5 533 aa21.3■■□□□ 1
EDEM1-203ENST00000443790 ANKRD36BP1Q96IX9 119 aa21.3■■□□□ 1
EDEM1-203ENST00000443790 INTS13Q9NVM9 706 aa21.3■■□□□ 1
EDEM1-203ENST00000443790 ZDHHC9Q9Y397 364 aa21.3■■□□□ 1
EDEM1-203ENST00000443790 DCDC2BA2VCK2 349 aa21.29■■□□□ 1
EDEM1-203ENST00000443790 AMPD2Q01433 879 aa21.29■■□□□ 1
EDEM1-203ENST00000443790 FAM160A1Q05DH4 1040 aa21.29■■□□□ 1
EDEM1-203ENST00000443790 MYO1EQ12965 1108 aa21.29■■□□□ 1
EDEM1-203ENST00000443790 MTF1Q14872 753 aa21.29■■□□□ 1
EDEM1-203ENST00000443790 PDGFRLQ15198 375 aa21.29■■□□□ 1
EDEM1-203ENST00000443790 CSRP2Q16527 193 aa21.29■■□□□ 1
EDEM1-203ENST00000443790 PRR23CQ6ZRP0 262 aa21.29■■□□□ 1
EDEM1-203ENST00000443790 STXBP4Q6ZWJ1 553 aa21.29■■□□□ 1
EDEM1-203ENST00000443790 DPH6Q7L8W6 267 aa21.29■■□□□ 1
EDEM1-203ENST00000443790 FAM160A2Q8N612 972 aaPredicted RBP21.29■■□□□ 1
EDEM1-203ENST00000443790 LINC00301Q8NCQ3 95 aa21.29■■□□□ 1
EDEM1-203ENST00000443790 GLIS3Q8NEA6 775 aa21.29■■□□□ 1
EDEM1-203ENST00000443790 OR5B17Q8NGF7 314 aa21.29■■□□□ 1
EDEM1-203ENST00000443790 TNMDQ9H2S6 317 aa21.29■■□□□ 1
EDEM1-203ENST00000443790 TRPC7Q9HCX4 862 aa21.29■■□□□ 1
EDEM1-203ENST00000443790 R3HCC1Q9Y3T6 440 aaKnown RBP21.29■■□□□ 1
EDEM1-203ENST00000443790 USP4Q13107 963 aa21.28■■□□□ 1
EDEM1-203ENST00000443790 ZNF77Q15935 545 aa21.28■■□□□ 1
EDEM1-203ENST00000443790 FAM171BQ6P995 826 aa21.28■■□□□ 1
EDEM1-203ENST00000443790 LIMS2Q7Z4I7 341 aa21.28■■□□□ 1
EDEM1-203ENST00000443790 CBWD2Q8IUF1 395 aa21.28■■□□□ 1
EDEM1-203ENST00000443790 SCN4BQ8IWT1 228 aa21.28■■□□□ 1
EDEM1-203ENST00000443790 KBTBD7Q8WVZ9 684 aa21.28■■□□□ 1
EDEM1-203ENST00000443790 HPS3Q969F9 1004 aa21.28■■□□□ 1
EDEM1-203ENST00000443790 HPDLQ96IR7 371 aa21.28■■□□□ 1
EDEM1-203ENST00000443790 SLC22A12Q96S37 553 aa21.28■■□□□ 1
EDEM1-203ENST00000443790 TRAV19A0A0A6YYK7 116 aa21.27■■□□□ 1
EDEM1-203ENST00000443790 CCDC163A0A0D9SF12 145 aa21.27■■□□□ 1
EDEM1-203ENST00000443790 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.27■■□□□ 1
EDEM1-203ENST00000443790 ZNF233A6NK53 670 aa21.27■■□□□ 1
EDEM1-203ENST00000443790 SPTLC2O15270 562 aa21.27■■□□□ 1
EDEM1-203ENST00000443790 ATG13O75143 517 aa21.27■■□□□ 1
EDEM1-203ENST00000443790 RNF40O75150 1001 aa21.27■■□□□ 1
EDEM1-203ENST00000443790 EGFP01133 1207 aa21.27■■□□□ 1
EDEM1-203ENST00000443790 TNNC2P02585 160 aa21.27■■□□□ 1
EDEM1-203ENST00000443790 CKMP06732 381 aa21.27■■□□□ 1
EDEM1-203ENST00000443790 USP17L7P0C7H9 530 aa21.27■■□□□ 1
EDEM1-203ENST00000443790 MAGEA11P43364 429 aa21.27■■□□□ 1
EDEM1-203ENST00000443790 DNM1Q05193 864 aaKnown RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms