RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 CSH2P0DML3 217 aa11.53□□□□□ -0.56
HDAC6-211ENST00000443563 CD58P19256 250 aa11.53□□□□□ -0.56
HDAC6-211ENST00000443563 BDNFP23560 247 aa11.53□□□□□ -0.56
HDAC6-211ENST00000443563 CYP2F1P24903 491 aa11.53□□□□□ -0.56
HDAC6-211ENST00000443563 ANXA13P27216 316 aa11.53□□□□□ -0.56
HDAC6-211ENST00000443563 GRIK1P39086 918 aa11.53□□□□□ -0.56
HDAC6-211ENST00000443563 EPHA5P54756 1037 aa11.53□□□□□ -0.56
HDAC6-211ENST00000443563 CUL2Q13617 745 aa11.53□□□□□ -0.56
HDAC6-211ENST00000443563 KCNJ12Q14500 433 aa11.53□□□□□ -0.56
HDAC6-211ENST00000443563 VWA3BQ502W6 1294 aa11.53□□□□□ -0.56
HDAC6-211ENST00000443563 TCP11X2Q5H9J9 407 aa11.53□□□□□ -0.56
HDAC6-211ENST00000443563 GBP6Q6ZN66 633 aa11.53□□□□□ -0.56
HDAC6-211ENST00000443563 C11orf57Q6ZUT1 292 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-211ENST00000443563 GET4Q7L5D6 327 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-211ENST00000443563 ACOT1Q86TX2 421 aa11.53□□□□□ -0.56
HDAC6-211ENST00000443563 TTC9BQ8N6N2 239 aa11.53□□□□□ -0.56
HDAC6-211ENST00000443563 TATDN2Q93075 761 aa11.53□□□□□ -0.56
HDAC6-211ENST00000443563 NXPE3Q969Y0 559 aa11.53□□□□□ -0.56
HDAC6-211ENST00000443563 ELMO3Q96BJ8 720 aa11.53□□□□□ -0.56
HDAC6-211ENST00000443563 GCNAQ96QF7 691 aa11.53□□□□□ -0.56
HDAC6-211ENST00000443563 BPIFA3Q9BQP9 254 aa11.53□□□□□ -0.56
HDAC6-211ENST00000443563 MED10Q9BTT4 135 aa11.53□□□□□ -0.56
HDAC6-211ENST00000443563 GPR88Q9GZN0 384 aa11.53□□□□□ -0.56
HDAC6-211ENST00000443563 DNAJC25Q9H1X3 360 aa11.53□□□□□ -0.56
HDAC6-211ENST00000443563 DPEP3Q9H4B8 488 aa11.53□□□□□ -0.56
HDAC6-211ENST00000443563 CISHQ9NSE2 258 aa11.53□□□□□ -0.56
HDAC6-211ENST00000443563 HCFC1R1Q9NWW0 138 aa11.53□□□□□ -0.56
HDAC6-211ENST00000443563 GCNT4Q9P109 453 aa11.53□□□□□ -0.56
HDAC6-211ENST00000443563 UXTQ9UBK9 157 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-211ENST00000443563 SMTNL1A8MU46 457 aa11.52□□□□□ -0.57
HDAC6-211ENST00000443563 C2CD4DB7Z1M9 353 aa11.52□□□□□ -0.57
HDAC6-211ENST00000443563 TNFRSF10AO00220 468 aa11.52□□□□□ -0.57
HDAC6-211ENST00000443563 PES1O00541 588 aaKnown RBP11.52□□□□□ -0.57
HDAC6-211ENST00000443563 CILPO75339 1184 aa11.52□□□□□ -0.57
HDAC6-211ENST00000443563 SOAT2O75908 522 aa11.52□□□□□ -0.57
HDAC6-211ENST00000443563 ATF6P18850 670 aa11.52□□□□□ -0.57
HDAC6-211ENST00000443563 NTHL1P78549 312 aa11.52□□□□□ -0.57
HDAC6-211ENST00000443563 GCNT1Q02742 428 aa11.52□□□□□ -0.57
HDAC6-211ENST00000443563 EXOC3L4Q17RC7 722 aa11.52□□□□□ -0.57
HDAC6-211ENST00000443563 ANO6Q4KMQ2 910 aa11.52□□□□□ -0.57
HDAC6-211ENST00000443563 SMYD5Q6GMV2 418 aa11.52□□□□□ -0.57
HDAC6-211ENST00000443563 MTSS1LQ765P7 747 aa11.52□□□□□ -0.57
HDAC6-211ENST00000443563 ENOSF1Q7L5Y1 443 aa11.52□□□□□ -0.57
HDAC6-211ENST00000443563 DNAJB7Q7Z6W7 309 aaPredicted RBP11.52□□□□□ -0.57
HDAC6-211ENST00000443563 SCN4BQ8IWT1 228 aa11.52□□□□□ -0.57
HDAC6-211ENST00000443563 PPM1KQ8N3J5 372 aa11.52□□□□□ -0.57
HDAC6-211ENST00000443563 GIPC2Q8TF65 315 aa11.52□□□□□ -0.57
HDAC6-211ENST00000443563 JAKMIP2Q96AA8 810 aa11.52□□□□□ -0.57
HDAC6-211ENST00000443563 TMEM176AQ96HP8 235 aa11.52□□□□□ -0.57
HDAC6-211ENST00000443563 SPATA17Q96L03 361 aa11.52□□□□□ -0.57
HDAC6-211ENST00000443563 NECAB3Q96P71 396 aaPredicted RBP11.52□□□□□ -0.57
HDAC6-211ENST00000443563 B3GNT5Q9BYG0 378 aa11.52□□□□□ -0.57
HDAC6-211ENST00000443563 INTS2Q9H0H0 1204 aaKnown RBP11.52□□□□□ -0.57
HDAC6-211ENST00000443563 NDST4Q9H3R1 872 aa11.52□□□□□ -0.57
HDAC6-211ENST00000443563 SAMSN1Q9NSI8 373 aaKnown RBP11.52□□□□□ -0.57
HDAC6-211ENST00000443563 GDE1Q9NZC3 331 aa11.52□□□□□ -0.57
HDAC6-211ENST00000443563 EPS15L1Q9UBC2 864 aa11.52□□□□□ -0.57
HDAC6-211ENST00000443563 ZMYM5Q9UJ78 669 aa11.52□□□□□ -0.57
HDAC6-211ENST00000443563 CDH7Q9ULB5 785 aa11.52□□□□□ -0.57
HDAC6-211ENST00000443563 NME7Q9Y5B8 376 aa11.52□□□□□ -0.57
HDAC6-211ENST00000443563 MYH10P35580 1976 aa11.52□□□□□ -0.57
HDAC6-211ENST00000443563 NOTCH4Q99466 2003 aa11.52□□□□□ -0.57
HDAC6-211ENST00000443563 GREB1Q4ZG55 1949 aa11.51□□□□□ -0.57
HDAC6-211ENST00000443563 LRRN2O75325 713 aa11.51□□□□□ -0.57
HDAC6-211ENST00000443563 CAVIN2O95810 425 aa11.51□□□□□ -0.57
HDAC6-211ENST00000443563 MYL4P12829 197 aa11.51□□□□□ -0.57
HDAC6-211ENST00000443563 LAMP2P13473 410 aa11.51□□□□□ -0.57
HDAC6-211ENST00000443563 CDK11BP21127 795 aaKnown RBP11.51□□□□□ -0.57
HDAC6-211ENST00000443563 SP100P23497 879 aaPredicted RBP11.51□□□□□ -0.57
HDAC6-211ENST00000443563 CDC25CP30307 473 aa11.51□□□□□ -0.57
HDAC6-211ENST00000443563 LRMPQ12912 555 aa11.51□□□□□ -0.57
HDAC6-211ENST00000443563 DDR2Q16832 855 aa11.51□□□□□ -0.57
HDAC6-211ENST00000443563 ARHGAP15Q53QZ3 475 aa11.51□□□□□ -0.57
HDAC6-211ENST00000443563 HSP90AA4PQ58FG1 418 aa11.51□□□□□ -0.57
HDAC6-211ENST00000443563 PRSS36Q5K4E3 855 aa11.51□□□□□ -0.57
HDAC6-211ENST00000443563 CDKAL1Q5VV42 579 aa11.51□□□□□ -0.57
HDAC6-211ENST00000443563 FAM35AQ86V20 835 aa11.51□□□□□ -0.57
HDAC6-211ENST00000443563 TMC8Q8IU68 726 aa11.51□□□□□ -0.57
HDAC6-211ENST00000443563 RNF135Q8IUD6 432 aa11.51□□□□□ -0.57
HDAC6-211ENST00000443563 LMO3Q8TAP4 145 aa11.51□□□□□ -0.57
HDAC6-211ENST00000443563 FEZF2Q8TBJ5 459 aa11.51□□□□□ -0.57
HDAC6-211ENST00000443563 FGF13Q92913 245 aa11.51□□□□□ -0.57
HDAC6-211ENST00000443563 TRMT2BQ96GJ1 504 aaKnown RBP11.51□□□□□ -0.57
HDAC6-211ENST00000443563 SMARCD1Q96GM5 515 aa11.51□□□□□ -0.57
HDAC6-211ENST00000443563 C8orf48Q96LL4 319 aa11.51□□□□□ -0.57
HDAC6-211ENST00000443563 MYADMQ96S97 322 aa11.51□□□□□ -0.57
HDAC6-211ENST00000443563 LPIN3Q9BQK8 851 aa11.51□□□□□ -0.57
HDAC6-211ENST00000443563 DMAP1Q9NPF5 467 aaPredicted RBP11.51□□□□□ -0.57
HDAC6-211ENST00000443563 FANCLQ9NW38 375 aa11.51□□□□□ -0.57
HDAC6-211ENST00000443563 IGSF9Q9P2J2 1179 aa11.51□□□□□ -0.57
HDAC6-211ENST00000443563 KIAA1257Q9ULG3 409 aa11.51□□□□□ -0.57
HDAC6-211ENST00000443563 DENND4CQ5VZ89 1909 aa11.5□□□□□ -0.57
HDAC6-211ENST00000443563 DOCK6Q96HP0 2047 aa11.5□□□□□ -0.57
HDAC6-211ENST00000443563 SYCE3A1L190 88 aa11.5□□□□□ -0.57
HDAC6-211ENST00000443563 SLC38A8A6NNN8 435 aa11.5□□□□□ -0.57
HDAC6-211ENST00000443563 BECN2A8MW95 431 aa11.5□□□□□ -0.57
HDAC6-211ENST00000443563 DLL1O00548 723 aa11.5□□□□□ -0.57
HDAC6-211ENST00000443563 AP1G2O75843 785 aa11.5□□□□□ -0.57
HDAC6-211ENST00000443563 NOL4O94818 638 aa11.5□□□□□ -0.57
HDAC6-211ENST00000443563 FAM200BP0CF97 657 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms