RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 SFRP4Q6FHJ7 346 aaPredicted RBP5.73□□□□□ -1.49
VPS50-206ENST00000443443 CCSAPQ6IQ19 270 aaPredicted RBP5.73□□□□□ -1.49
VPS50-206ENST00000443443 ZNF551Q7Z340 670 aaPredicted RBP5.73□□□□□ -1.49
VPS50-206ENST00000443443 C11orf96Q7Z7L8 435 aa5.73□□□□□ -1.49
VPS50-206ENST00000443443 HASPINQ8TF76 798 aa5.73□□□□□ -1.49
VPS50-206ENST00000443443 DDB2Q92466 427 aa5.73□□□□□ -1.49
VPS50-206ENST00000443443 NUP88Q99567 741 aaPredicted RBP5.73□□□□□ -1.49
VPS50-206ENST00000443443 CGRRF1Q99675 332 aa5.73□□□□□ -1.49
VPS50-206ENST00000443443 TCF7L1Q9HCS4 588 aa5.73□□□□□ -1.49
VPS50-206ENST00000443443 SERTAD4Q9NUC0 356 aa5.73□□□□□ -1.49
VPS50-206ENST00000443443 SERTAD3Q9UJW9 196 aa5.73□□□□□ -1.49
VPS50-206ENST00000443443 ADAM21Q9UKJ8 722 aa5.73□□□□□ -1.49
VPS50-206ENST00000443443 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.73□□□□□ -1.49
VPS50-206ENST00000443443 NXPH3O95157 252 aa5.72□□□□□ -1.49
VPS50-206ENST00000443443 GRPP07492 148 aa5.72□□□□□ -1.49
VPS50-206ENST00000443443 ATXN1LP0C7T5 689 aaKnown RBP5.72□□□□□ -1.49
VPS50-206ENST00000443443 ZNF267Q14586 743 aaPredicted RBP5.72□□□□□ -1.49
VPS50-206ENST00000443443 TEDDM1Q5T9Z0 273 aa5.72□□□□□ -1.49
VPS50-206ENST00000443443 ARHGAP40Q5TG30 622 aa5.72□□□□□ -1.49
VPS50-206ENST00000443443 SUMO4Q6EEV6 95 aa5.72□□□□□ -1.49
VPS50-206ENST00000443443 CLEC4GQ6UXB4 293 aa5.72□□□□□ -1.49
VPS50-206ENST00000443443 SRRM1Q8IYB3 904 aaKnown RBP5.72□□□□□ -1.49
VPS50-206ENST00000443443 C1GALT1C1Q96EU7 318 aa5.72□□□□□ -1.49
VPS50-206ENST00000443443 PKNOX2Q96KN3 472 aa5.72□□□□□ -1.49
VPS50-206ENST00000443443 LRGUKQ96M69 825 aa5.72□□□□□ -1.49
VPS50-206ENST00000443443 SERHLQ9NQF3 203 aa5.72□□□□□ -1.49
VPS50-206ENST00000443443 HESX1Q9UBX0 185 aa5.72□□□□□ -1.49
VPS50-206ENST00000443443 STXBP5LQ9Y2K9 1186 aa5.72□□□□□ -1.49
VPS50-206ENST00000443443 MYO1CO00159 1063 aa5.71□□□□□ -1.5
VPS50-206ENST00000443443 QSOX1O00391 747 aa5.71□□□□□ -1.5
VPS50-206ENST00000443443 DNAJB5O75953 348 aa5.71□□□□□ -1.5
VPS50-206ENST00000443443 DRD4P21917 467 aa5.71□□□□□ -1.5
VPS50-206ENST00000443443 CYP2C18P33260 490 aa5.71□□□□□ -1.5
VPS50-206ENST00000443443 PDE1AP54750 535 aa5.71□□□□□ -1.5
VPS50-206ENST00000443443 LILRA4P59901 499 aa5.71□□□□□ -1.5
VPS50-206ENST00000443443 FOXF2Q12947 444 aa5.71□□□□□ -1.5
VPS50-206ENST00000443443 GRM1Q13255 1194 aa5.71□□□□□ -1.5
VPS50-206ENST00000443443 HDAC1Q13547 482 aaPredicted RBP5.71□□□□□ -1.5
VPS50-206ENST00000443443 UBE4AQ14139 1066 aa5.71□□□□□ -1.5
VPS50-206ENST00000443443 SRSF7Q16629 238 aaKnown RBP eCLIP5.71□□□□□ -1.5
VPS50-206ENST00000443443 ATAT1Q5SQI0 421 aa5.71□□□□□ -1.5
VPS50-206ENST00000443443 TREML2Q5T2D2 321 aa5.71□□□□□ -1.5
VPS50-206ENST00000443443 ZNF618Q5T7W0 954 aa5.71□□□□□ -1.5
VPS50-206ENST00000443443 DTX2Q86UW9 622 aa5.71□□□□□ -1.5
VPS50-206ENST00000443443 CELF5Q8N6W0 485 aaKnown RBP5.71□□□□□ -1.5
VPS50-206ENST00000443443 FANCBQ8NB91 859 aa5.71□□□□□ -1.5
VPS50-206ENST00000443443 MOGAT1Q96PD6 335 aa5.71□□□□□ -1.5
VPS50-206ENST00000443443 NAP1L4Q99733 375 aaKnown RBP5.71□□□□□ -1.5
VPS50-206ENST00000443443 SH3BP4Q9P0V3 963 aa5.71□□□□□ -1.5
VPS50-206ENST00000443443 STAP2Q9UGK3 403 aa5.71□□□□□ -1.5
VPS50-206ENST00000443443 CCNL1Q9UK58 526 aaPredicted RBP5.71□□□□□ -1.5
VPS50-206ENST00000443443 PLEKHM1Q9Y4G2 1056 aa5.71□□□□□ -1.5
VPS50-206ENST00000443443 AOX1Q06278 1338 aa5.71□□□□□ -1.5
VPS50-206ENST00000443443 CCDC189A1A4V9 331 aa5.7□□□□□ -1.5
VPS50-206ENST00000443443 KIF3BO15066 747 aa5.7□□□□□ -1.5
VPS50-206ENST00000443443 DCLK1O15075 740 aa5.7□□□□□ -1.5
VPS50-206ENST00000443443 SLC16A3O15427 465 aaKnown RBP5.7□□□□□ -1.5
VPS50-206ENST00000443443 TLR5O60602 858 aa5.7□□□□□ -1.5
VPS50-206ENST00000443443 PRKCGP05129 697 aa5.7□□□□□ -1.5
VPS50-206ENST00000443443 HSP90AA1P07900 732 aaKnown RBP5.7□□□□□ -1.5
VPS50-206ENST00000443443 SATB1Q01826 763 aa5.7□□□□□ -1.5
VPS50-206ENST00000443443 HNRNPA0Q13151 305 aaKnown RBP5.7□□□□□ -1.5
VPS50-206ENST00000443443 E2F2Q14209 437 aa5.7□□□□□ -1.5
VPS50-206ENST00000443443 FGL2Q14314 439 aa5.7□□□□□ -1.5
VPS50-206ENST00000443443 EMC10Q5UCC4 262 aa5.7□□□□□ -1.5
VPS50-206ENST00000443443 KIAA1614Q5VZ46 1190 aa5.7□□□□□ -1.5
VPS50-206ENST00000443443 SLC29A4Q7RTT9 530 aa5.7□□□□□ -1.5
VPS50-206ENST00000443443 FAM109AQ8N4B1 249 aa5.7□□□□□ -1.5
VPS50-206ENST00000443443 SENP7Q9BQF6 1050 aa5.7□□□□□ -1.5
VPS50-206ENST00000443443 PTDSS2Q9BVG9 487 aa5.7□□□□□ -1.5
VPS50-206ENST00000443443 ZNF180Q9UJW8 692 aa5.7□□□□□ -1.5
VPS50-206ENST00000443443 TMX2Q9Y320 296 aa5.7□□□□□ -1.5
VPS50-206ENST00000443443 SETD1BQ9UPS6 1966 aaKnown RBP5.69□□□□□ -1.5
VPS50-206ENST00000443443 DNAJC9-AS1A6NH13 148 aa5.69□□□□□ -1.5
VPS50-206ENST00000443443 TARM1B6A8C7 271 aa5.69□□□□□ -1.5
VPS50-206ENST00000443443 ABLIM3O94929 683 aa5.69□□□□□ -1.5
VPS50-206ENST00000443443 JUPP14923 745 aa5.69□□□□□ -1.5
VPS50-206ENST00000443443 MCCP23508 829 aa5.69□□□□□ -1.5
VPS50-206ENST00000443443 LIPAP38571 399 aa5.69□□□□□ -1.5
VPS50-206ENST00000443443 CLCN2P51788 898 aa5.69□□□□□ -1.5
VPS50-206ENST00000443443 LOXL3P58215 753 aa5.69□□□□□ -1.5
VPS50-206ENST00000443443 SP2Q02086 613 aa5.69□□□□□ -1.5
VPS50-206ENST00000443443 TTF1Q15361 905 aaPredicted RBP5.69□□□□□ -1.5
VPS50-206ENST00000443443 ZRSR2Q15696 482 aaKnown RBP5.69□□□□□ -1.5
VPS50-206ENST00000443443 PCID2Q5JVF3 399 aa5.69□□□□□ -1.5
VPS50-206ENST00000443443 RGS7BPQ6MZT1 257 aaPredicted RBP5.69□□□□□ -1.5
VPS50-206ENST00000443443 CEP85Q6P2H3 762 aa5.69□□□□□ -1.5
VPS50-206ENST00000443443 WDR75Q8IWA0 830 aaKnown RBP5.69□□□□□ -1.5
VPS50-206ENST00000443443 LRRC71Q8N4P6 559 aa5.69□□□□□ -1.5
VPS50-206ENST00000443443 PLBD2Q8NHP8 589 aa5.69□□□□□ -1.5
VPS50-206ENST00000443443 JPH3Q8WXH2 748 aaPredicted RBP5.69□□□□□ -1.5
VPS50-206ENST00000443443 DPF1Q92782 380 aa5.69□□□□□ -1.5
VPS50-206ENST00000443443 XPR1Q9UBH6 696 aa5.69□□□□□ -1.5
VPS50-206ENST00000443443 hCG_1984214I3L0E3 225 aa5.68□□□□□ -1.5
VPS50-206ENST00000443443 SMIM22K7EJ46 135 aa5.68□□□□□ -1.5
VPS50-206ENST00000443443 CAND2O75155 1236 aa5.68□□□□□ -1.5
VPS50-206ENST00000443443 FESP07332 822 aa5.68□□□□□ -1.5
VPS50-206ENST00000443443 HSPA6P17066 643 aa5.68□□□□□ -1.5
VPS50-206ENST00000443443 ENGP17813 658 aa5.68□□□□□ -1.5
VPS50-206ENST00000443443 RAB27AP51159 221 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms