RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 CSH1P0DML2 217 aa15.53■□□□□ 0.08
HMGN1-208ENST00000443046 CSH2P0DML3 217 aa15.53■□□□□ 0.08
HMGN1-208ENST00000443046 TCF3P15923 654 aa15.53■□□□□ 0.08
HMGN1-208ENST00000443046 BCKDHBP21953 392 aa15.53■□□□□ 0.08
HMGN1-208ENST00000443046 GBP1P32455 592 aa15.53■□□□□ 0.08
HMGN1-208ENST00000443046 GPR15P49685 360 aa15.53■□□□□ 0.08
HMGN1-208ENST00000443046 TAF6P49848 677 aa15.53■□□□□ 0.08
HMGN1-208ENST00000443046 DGKEP52429 567 aa15.53■□□□□ 0.08
HMGN1-208ENST00000443046 ZNF131P52739 623 aa15.53■□□□□ 0.08
HMGN1-208ENST00000443046 IRX4P78413 519 aa15.53■□□□□ 0.08
HMGN1-208ENST00000443046 USP4Q13107 963 aa15.53■□□□□ 0.08
HMGN1-208ENST00000443046 TMEM119Q4V9L6 283 aa15.53■□□□□ 0.08
HMGN1-208ENST00000443046 LRSAM1Q6UWE0 723 aa15.53■□□□□ 0.08
HMGN1-208ENST00000443046 CCDC83Q8IWF9 413 aa15.53■□□□□ 0.08
HMGN1-208ENST00000443046 TSTD1Q8NFU3 115 aa15.53■□□□□ 0.08
HMGN1-208ENST00000443046 CCDC26Q8TAB7 109 aa15.53■□□□□ 0.08
HMGN1-208ENST00000443046 OLIG1Q8TAK6 271 aa15.53■□□□□ 0.08
HMGN1-208ENST00000443046 USP33Q8TEY7 942 aa15.53■□□□□ 0.08
HMGN1-208ENST00000443046 LEO1Q8WVC0 666 aaPredicted RBP15.53■□□□□ 0.08
HMGN1-208ENST00000443046 ATP2A3Q93084 1043 aa15.53■□□□□ 0.08
HMGN1-208ENST00000443046 CNOT6LQ96LI5 555 aaKnown RBP15.53■□□□□ 0.08
HMGN1-208ENST00000443046 SLC22A12Q96S37 553 aa15.53■□□□□ 0.08
HMGN1-208ENST00000443046 FIZ1Q96SL8 496 aa15.53■□□□□ 0.08
HMGN1-208ENST00000443046 PYM1Q9BRP8 204 aaKnown RBP15.53■□□□□ 0.08
HMGN1-208ENST00000443046 TMEM206Q9H813 350 aa15.53■□□□□ 0.08
HMGN1-208ENST00000443046 EVLQ9UI08 416 aaPredicted RBP15.53■□□□□ 0.08
HMGN1-208ENST00000443046 ODF2LQ9ULJ1 636 aa15.53■□□□□ 0.08
HMGN1-208ENST00000443046 LIMCH1Q9UPQ0 1083 aa15.53■□□□□ 0.08
HMGN1-208ENST00000443046 INVSQ9Y283 1065 aa15.53■□□□□ 0.08
HMGN1-208ENST00000443046 IGSF10Q6WRI0 2623 aa15.52■□□□□ 0.08
HMGN1-208ENST00000443046 CHRM1P11229 460 aaPredicted RBP15.52■□□□□ 0.08
HMGN1-208ENST00000443046 HMGN5P82970 282 aaKnown RBP15.52■□□□□ 0.08
HMGN1-208ENST00000443046 POU5F1Q01860 360 aaKnown RBP15.52■□□□□ 0.08
HMGN1-208ENST00000443046 GNL2Q13823 731 aaKnown RBP15.52■□□□□ 0.08
HMGN1-208ENST00000443046 STKLD1Q8NE28 680 aa15.52■□□□□ 0.08
HMGN1-208ENST00000443046 FAM212AQ96EL1 285 aa15.52■□□□□ 0.08
HMGN1-208ENST00000443046 CYP2S1Q96SQ9 504 aa15.52■□□□□ 0.08
HMGN1-208ENST00000443046 TPSD1Q9BZJ3 242 aa15.52■□□□□ 0.08
HMGN1-208ENST00000443046 DPP3Q9NY33 737 aa15.52■□□□□ 0.08
HMGN1-208ENST00000443046 GCNT4Q9P109 453 aa15.52■□□□□ 0.08
HMGN1-208ENST00000443046 NEUROG3Q9Y4Z2 214 aa15.52■□□□□ 0.08
HMGN1-208ENST00000443046 WNT6Q9Y6F9 365 aa15.52■□□□□ 0.08
HMGN1-208ENST00000443046 STYXL1Q9Y6J8 313 aa15.52■□□□□ 0.08
HMGN1-208ENST00000443046 GCN1Q92616 2671 aaKnown RBP15.52■□□□□ 0.07
HMGN1-208ENST00000443046 PLXND1Q9Y4D7 1925 aa15.51■□□□□ 0.07
HMGN1-208ENST00000443046 ANTXRLA6NF34 631 aa15.51■□□□□ 0.07
HMGN1-208ENST00000443046 KPNA7A9QM74 516 aa15.51■□□□□ 0.07
HMGN1-208ENST00000443046 ACOT2P49753 483 aa15.51■□□□□ 0.07
HMGN1-208ENST00000443046 ATP2C1P98194 919 aaPredicted RBP15.51■□□□□ 0.07
HMGN1-208ENST00000443046 GTF2BQ00403 316 aa15.51■□□□□ 0.07
HMGN1-208ENST00000443046 RING1Q06587 406 aa15.51■□□□□ 0.07
HMGN1-208ENST00000443046 ZRSR1Q15695 479 aaKnown RBP15.51■□□□□ 0.07
HMGN1-208ENST00000443046 NFE2Q16621 373 aaPredicted RBP15.51■□□□□ 0.07
HMGN1-208ENST00000443046 GAB4Q2WGN9 574 aa15.51■□□□□ 0.07
HMGN1-208ENST00000443046 SDHAF4Q5VUM1 108 aa15.51■□□□□ 0.07
HMGN1-208ENST00000443046 CYP2U1Q7Z449 544 aa15.51■□□□□ 0.07
HMGN1-208ENST00000443046 DEFB124Q8NES8 71 aa15.51■□□□□ 0.07
HMGN1-208ENST00000443046 MDGA1Q8NFP4 955 aa15.51■□□□□ 0.07
HMGN1-208ENST00000443046 PLIN2Q99541 437 aa15.51■□□□□ 0.07
HMGN1-208ENST00000443046 PKMYT1Q99640 499 aa15.51■□□□□ 0.07
HMGN1-208ENST00000443046 REEP2Q9BRK0 252 aa15.51■□□□□ 0.07
HMGN1-208ENST00000443046 PI4K2AQ9BTU6 479 aa15.51■□□□□ 0.07
HMGN1-208ENST00000443046 LINC00597Q9H2U6 94 aa15.51■□□□□ 0.07
HMGN1-208ENST00000443046 ABCB6Q9NP58 842 aa15.51■□□□□ 0.07
HMGN1-208ENST00000443046 UXTQ9UBK9 157 aaPredicted RBP15.51■□□□□ 0.07
HMGN1-208ENST00000443046 MAGED2Q9UNF1 606 aaPredicted RBP15.51■□□□□ 0.07
HMGN1-208ENST00000443046 HELZP42694 1942 aaKnown RBP15.51■□□□□ 0.07
HMGN1-208ENST00000443046 FAM221BA6H8Z2 402 aa15.5■□□□□ 0.07
HMGN1-208ENST00000443046 UPK3BL1B0FP48 263 aa15.5■□□□□ 0.07
HMGN1-208ENST00000443046 ANKRD63C9JTQ0 380 aa15.5■□□□□ 0.07
HMGN1-208ENST00000443046 UPK3BL2E5RIL1 263 aa15.5■□□□□ 0.07
HMGN1-208ENST00000443046 PRPF40AO75400 957 aaKnown RBP15.5■□□□□ 0.07
HMGN1-208ENST00000443046 USP17L7P0C7H9 530 aa15.5■□□□□ 0.07
HMGN1-208ENST00000443046 HNRNPLP14866 589 aaKnown RBP eCLIP15.5■□□□□ 0.07
HMGN1-208ENST00000443046 OPRD1P41143 372 aa15.5■□□□□ 0.07
HMGN1-208ENST00000443046 IFNAR2P48551 515 aa15.5■□□□□ 0.07
HMGN1-208ENST00000443046 PSMD2Q13200 908 aa15.5■□□□□ 0.07
HMGN1-208ENST00000443046 CRY1Q16526 586 aa15.5■□□□□ 0.07
HMGN1-208ENST00000443046 DDR2Q16832 855 aa15.5■□□□□ 0.07
HMGN1-208ENST00000443046 CRELD2Q6UXH1 353 aaPredicted RBP15.5■□□□□ 0.07
HMGN1-208ENST00000443046 PIP4P1Q86T03 277 aa15.5■□□□□ 0.07
HMGN1-208ENST00000443046 EFCAB13Q8IY85 973 aa15.5■□□□□ 0.07
HMGN1-208ENST00000443046 LRRC15Q8TF66 581 aa15.5■□□□□ 0.07
HMGN1-208ENST00000443046 ZCCHC14Q8WYQ9 949 aaKnown RBP15.5■□□□□ 0.07
HMGN1-208ENST00000443046 ACBD6Q9BR61 282 aa15.5■□□□□ 0.07
HMGN1-208ENST00000443046 MMP17Q9ULZ9 603 aa15.5■□□□□ 0.07
HMGN1-208ENST00000443046 MSRB2Q9Y3D2 182 aa15.5■□□□□ 0.07
HMGN1-208ENST00000443046 TRAV19A0A0A6YYK7 116 aa15.49■□□□□ 0.07
HMGN1-208ENST00000443046 K7ENM7 598 aa15.49■□□□□ 0.07
HMGN1-208ENST00000443046 TNFRSF10BO14763 440 aa15.49■□□□□ 0.07
HMGN1-208ENST00000443046 TRAK2O60296 914 aa15.49■□□□□ 0.07
HMGN1-208ENST00000443046 CAPNS1P04632 268 aa15.49■□□□□ 0.07
HMGN1-208ENST00000443046 CYP2F1P24903 491 aa15.49■□□□□ 0.07
HMGN1-208ENST00000443046 P2RY2P41231 377 aa15.49■□□□□ 0.07
HMGN1-208ENST00000443046 RPL10AP62906 217 aaKnown RBP15.49■□□□□ 0.07
HMGN1-208ENST00000443046 ZXDBP98169 803 aa15.49■□□□□ 0.07
HMGN1-208ENST00000443046 TSPY1Q01534 308 aa15.49■□□□□ 0.07
HMGN1-208ENST00000443046 LMAN2Q12907 356 aa15.49■□□□□ 0.07
HMGN1-208ENST00000443046 NR1H3Q13133 447 aa15.49■□□□□ 0.07
HMGN1-208ENST00000443046 SV2CQ496J9 727 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms