RNA–Protein interactions for RNA: ENST00000442691.6

NR1I3-211, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-211ENST00000442691 MAN1A1P33908 653 aa9.62□□□□□ -0.87
NR1I3-211ENST00000442691 GNL1P36915 607 aaPredicted RBP9.62□□□□□ -0.87
NR1I3-211ENST00000442691 RPL34P49207 117 aaKnown RBP9.62□□□□□ -0.87
NR1I3-211ENST00000442691 BCAT1P54687 386 aa9.62□□□□□ -0.87
NR1I3-211ENST00000442691 CKAP4Q07065 602 aaKnown RBP9.62□□□□□ -0.87
NR1I3-211ENST00000442691 ELAVL2Q12926 359 aaKnown RBP9.62□□□□□ -0.87
NR1I3-211ENST00000442691 PTP4A2Q12974 167 aa9.62□□□□□ -0.87
NR1I3-211ENST00000442691 IKBKEQ14164 716 aa9.62□□□□□ -0.87
NR1I3-211ENST00000442691 ZNF268Q14587 947 aaPredicted RBP9.62□□□□□ -0.87
NR1I3-211ENST00000442691 MAPRE1Q15691 268 aaKnown RBP9.62□□□□□ -0.87
NR1I3-211ENST00000442691 PKDCCQ504Y2 493 aa9.62□□□□□ -0.87
NR1I3-211ENST00000442691 CLLU1OSQ5K130 101 aa9.62□□□□□ -0.87
NR1I3-211ENST00000442691 NAA35Q5VZE5 725 aa9.62□□□□□ -0.87
NR1I3-211ENST00000442691 ARCQ7LC44 396 aa9.62□□□□□ -0.87
NR1I3-211ENST00000442691 ZNF572Q7Z3I7 529 aaPredicted RBP9.62□□□□□ -0.87
NR1I3-211ENST00000442691 UBE2Q1Q7Z7E8 422 aa9.62□□□□□ -0.87
NR1I3-211ENST00000442691 HOMEZQ8IX15 550 aa9.62□□□□□ -0.87
NR1I3-211ENST00000442691 PDCL2Q8N4E4 241 aa9.62□□□□□ -0.87
NR1I3-211ENST00000442691 CEP112Q8N8E3 955 aa9.62□□□□□ -0.87
NR1I3-211ENST00000442691 C3orf20Q8ND61 904 aa9.62□□□□□ -0.87
NR1I3-211ENST00000442691 C1orf131Q8NDD1 294 aaKnown RBP9.62□□□□□ -0.87
NR1I3-211ENST00000442691 MNS1Q8NEH6 495 aa9.62□□□□□ -0.87
NR1I3-211ENST00000442691 MYRIPQ8NFW9 859 aa9.62□□□□□ -0.87
NR1I3-211ENST00000442691 ZNF564Q8TBZ8 553 aaPredicted RBP9.62□□□□□ -0.87
NR1I3-211ENST00000442691 FNIP1Q8TF40 1166 aa9.62□□□□□ -0.87
NR1I3-211ENST00000442691 TFAP2BQ92481 460 aa9.62□□□□□ -0.87
NR1I3-211ENST00000442691 LPPQ93052 612 aa9.62□□□□□ -0.87
NR1I3-211ENST00000442691 THAP11Q96EK4 314 aa9.62□□□□□ -0.87
NR1I3-211ENST00000442691 CYFIP2Q96F07 1278 aa9.62□□□□□ -0.87
NR1I3-211ENST00000442691 SENP8Q96LD8 212 aa9.62□□□□□ -0.87
NR1I3-211ENST00000442691 HEXIM2Q96MH2 286 aaKnown RBP9.62□□□□□ -0.87
NR1I3-211ENST00000442691 NCAPGQ9BPX3 1015 aa9.62□□□□□ -0.87
NR1I3-211ENST00000442691 CXCL16Q9H2A7 254 aa9.62□□□□□ -0.87
NR1I3-211ENST00000442691 ABCB6Q9NP58 842 aa9.62□□□□□ -0.87
NR1I3-211ENST00000442691 ACP6Q9NPH0 428 aa9.62□□□□□ -0.87
NR1I3-211ENST00000442691 RNF19AQ9NV58 838 aa9.62□□□□□ -0.87
NR1I3-211ENST00000442691 TMEM39AQ9NV64 488 aa9.62□□□□□ -0.87
NR1I3-211ENST00000442691 MIOSQ9NXC5 875 aa9.62□□□□□ -0.87
NR1I3-211ENST00000442691 ADAM22Q9P0K1 906 aa9.62□□□□□ -0.87
NR1I3-211ENST00000442691 CTTNBP2NLQ9P2B4 639 aa9.62□□□□□ -0.87
NR1I3-211ENST00000442691 STK39Q9UEW8 545 aa9.62□□□□□ -0.87
NR1I3-211ENST00000442691 CDH9Q9ULB4 789 aa9.62□□□□□ -0.87
NR1I3-211ENST00000442691 LRFN2Q9ULH4 789 aa9.62□□□□□ -0.87
NR1I3-211ENST00000442691 CCDC66A2RUB6 948 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 SYN3O14994 580 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 PALMO75781 387 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 URI1O94763 535 aaPredicted RBP9.61□□□□□ -0.87
NR1I3-211ENST00000442691 B3GAT3O94766 335 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 TIMP1P01033 207 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 GPD2P43304 727 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 ACADSBP45954 432 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 NOP2P46087 812 aaKnown RBP9.61□□□□□ -0.87
NR1I3-211ENST00000442691 RAP1GAPP47736 663 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 CLCNKBP51801 687 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 NAP1L1P55209 391 aaKnown RBP9.61□□□□□ -0.87
NR1I3-211ENST00000442691 CDH8P55286 799 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 SLC8A3P57103 927 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 PLCB3Q01970 1234 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 BST2Q10589 180 aaKnown RBP9.61□□□□□ -0.87
NR1I3-211ENST00000442691 ACAP1Q15027 740 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 SCARA3Q6AZY7 606 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 LYPD8Q6UX82 237 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 DAAM2Q86T65 1068 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 ERICH1Q86X53 443 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 METTL23Q86XA0 190 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 COLGALT2Q8IYK4 626 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 LRRC43Q8N309 656 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 TMEM199Q8N511 208 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 NIPA2Q8N8Q9 360 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 ANKRD52Q8NB46 1076 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 RNF169Q8NCN4 708 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 B3GALNT2Q8NCR0 500 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 OR6B3Q8NGW1 331 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 IPO4Q8TEX9 1081 aaKnown RBP9.61□□□□□ -0.87
NR1I3-211ENST00000442691 DIS3LQ8TF46 1054 aaKnown RBP9.61□□□□□ -0.87
NR1I3-211ENST00000442691 ARHGEF26Q96DR7 871 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 HES6Q96HZ4 224 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 PAWRQ96IZ0 340 aaKnown RBP9.61□□□□□ -0.87
NR1I3-211ENST00000442691 PBKQ96KB5 322 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 TWNKQ96RR1 684 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 HNRNPABQ99729 332 aaKnown RBP9.61□□□□□ -0.87
NR1I3-211ENST00000442691 ZSWIM1Q9BR11 485 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 ACBD6Q9BR61 282 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 MRPL45Q9BRJ2 306 aaKnown RBP9.61□□□□□ -0.87
NR1I3-211ENST00000442691 TLR10Q9BXR5 811 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 UBXN6Q9BZV1 441 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 GOLGA2P5Q9HBQ8 144 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 PNPLA8Q9NP80 782 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 TBC1D13Q9NVG8 400 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 CNOT8Q9UFF9 292 aaKnown RBP9.61□□□□□ -0.87
NR1I3-211ENST00000442691 HMGXB4Q9UGU5 601 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 PUF60Q9UHX1 559 aaKnown RBP9.61□□□□□ -0.87
NR1I3-211ENST00000442691 ATP11BQ9Y2G3 1177 aa9.61□□□□□ -0.87
NR1I3-211ENST00000442691 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.6□□□□□ -0.87
NR1I3-211ENST00000442691 TCRBV5S1A1TA0A578 114 aa9.6□□□□□ -0.87
NR1I3-211ENST00000442691 TMCO5BA8MYB1 307 aa9.6□□□□□ -0.87
NR1I3-211ENST00000442691 M0QYV0 167 aa9.6□□□□□ -0.87
NR1I3-211ENST00000442691 BUB1O43683 1085 aa9.6□□□□□ -0.87
NR1I3-211ENST00000442691 BUB1BO60566 1050 aaPredicted RBP9.6□□□□□ -0.87
NR1I3-211ENST00000442691 MICAL2O94851 1124 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms