RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 CENPPQ6IPU0 288 aa10.73□□□□□ -0.69
LIN54-202ENST00000442461 RBM17Q96I25 401 aaKnown RBP10.73□□□□□ -0.69
LIN54-202ENST00000442461 BTBD9Q96Q07 612 aa10.73□□□□□ -0.69
LIN54-202ENST00000442461 TMEM117Q9H0C3 514 aa10.73□□□□□ -0.69
LIN54-202ENST00000442461 CLK4Q9HAZ1 481 aaKnown RBP10.73□□□□□ -0.69
LIN54-202ENST00000442461 ATP6V1HQ9UI12 483 aa10.73□□□□□ -0.69
LIN54-202ENST00000442461 GOLGA8JA6NMD2 632 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 PEX11AO75192 247 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 APRTP07741 180 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 FMO5P49326 533 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 RAD23AP54725 363 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 ACTR2P61160 394 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 MYBPC3Q14896 1274 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 ZC3H12AQ5D1E8 599 aaKnown RBP10.72□□□□□ -0.69
LIN54-202ENST00000442461 ZC3H12BQ5HYM0 836 aaKnown RBP10.72□□□□□ -0.69
LIN54-202ENST00000442461 ZNF571Q7Z3V5 609 aaPredicted RBP10.72□□□□□ -0.69
LIN54-202ENST00000442461 LRRC47Q8N1G4 583 aaKnown RBP10.72□□□□□ -0.69
LIN54-202ENST00000442461 RYBPQ8N488 228 aaPredicted RBP10.72□□□□□ -0.69
LIN54-202ENST00000442461 ZBTB38Q8NAP3 1195 aaPredicted RBP10.72□□□□□ -0.69
LIN54-202ENST00000442461 TSPAN18Q96SJ8 248 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 OSBPL10Q9BXB5 764 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 WDR11Q9BZH6 1224 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 COG4Q9H9E3 785 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 PIDD1Q9HB75 910 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 EML4Q9HC35 981 aaKnown RBP10.72□□□□□ -0.69
LIN54-202ENST00000442461 MOSPD1Q9UJG1 213 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 GTF3C4Q9UKN8 822 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 PCDHGA3Q9Y5H0 932 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 DENND4BO75064 1496 aaPredicted RBP10.72□□□□□ -0.69
LIN54-202ENST00000442461 ARHGEF40Q8TER5 1519 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 EMSYQ7Z589 1322 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 PRR23AA6NEV1 266 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 KIAA0391O15091 583 aaKnown RBP10.72□□□□□ -0.69
LIN54-202ENST00000442461 PRLP01236 227 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 IFNA8P32881 189 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 FDFT1P37268 417 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 IREB2P48200 963 aaKnown RBP10.72□□□□□ -0.69
LIN54-202ENST00000442461 CLCN2P51788 898 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 PDIA5Q14554 519 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 GPATCH4Q5T3I0 446 aaKnown RBP10.72□□□□□ -0.69
LIN54-202ENST00000442461 ENOSF1Q7L5Y1 443 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 DIS3LQ8TF46 1054 aaKnown RBP10.72□□□□□ -0.69
LIN54-202ENST00000442461 SCFD2Q8WU76 684 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 RORBQ92753 470 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 OLFM1Q99784 485 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 FRMD8Q9BZ67 464 aaPredicted RBP10.72□□□□□ -0.69
LIN54-202ENST00000442461 EPB41L4AQ9HCS5 686 aaPredicted RBP10.72□□□□□ -0.69
LIN54-202ENST00000442461 NGRNQ9NPE2 291 aaKnown RBP10.72□□□□□ -0.69
LIN54-202ENST00000442461 ABCB10Q9NRK6 738 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 VPS45Q9NRW7 570 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 USP20Q9Y2K6 914 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 IGSF1Q8N6C5 1336 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 DCDC2CA8MYV0 355 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 SLC25A3Q00325 362 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 BNC1Q01954 994 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 PARP10Q53GL7 1025 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 BNIPLQ7Z465 357 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 NT5DC3Q86UY8 548 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 FBXO11Q86XK2 927 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 ARHGEF26Q96DR7 871 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 CDRT15Q96T59 188 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 AGXT2Q9BYV1 514 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 PARVAQ9NVD7 372 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 ZNF232Q9UNY5 417 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 CYP2D7A0A087X1C5 515 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 E9PBE3 544 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 NDUFB5O43674 189 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 SIN3BO75182 1162 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 GLRA3O75311 464 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 MCAMP43121 646 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 CAPRIN1Q14444 709 aaKnown RBP10.72□□□□□ -0.69
LIN54-202ENST00000442461 TBCELQ5QJ74 424 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 LPCAT4Q643R3 524 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 TRIM69Q86WT6 500 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 BEST2Q8NFU1 509 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 SLC30A5Q8TAD4 765 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 PDCD6IPQ8WUM4 868 aaKnown RBP10.72□□□□□ -0.69
LIN54-202ENST00000442461 B3GALT6Q96L58 329 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 MTG1Q9BT17 334 aaPredicted RBP10.72□□□□□ -0.69
LIN54-202ENST00000442461 C6orf62Q9GZU0 229 aaPredicted RBP10.72□□□□□ -0.69
LIN54-202ENST00000442461 VPS33BQ9H267 617 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 SEL1LQ9UBV2 794 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 PCSK1NQ9UHG2 260 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 GGA1Q9UJY5 639 aa10.72□□□□□ -0.69
LIN54-202ENST00000442461 CDK12Q9NYV4 1490 aaPredicted RBP10.71□□□□□ -0.69
LIN54-202ENST00000442461 TMEM247A6NEH6 219 aa10.71□□□□□ -0.69
LIN54-202ENST00000442461 SNTNA6NMZ2 147 aa10.71□□□□□ -0.69
LIN54-202ENST00000442461 PIK3CDO00329 1044 aa10.71□□□□□ -0.69
LIN54-202ENST00000442461 CCNKO75909 580 aa10.71□□□□□ -0.69
LIN54-202ENST00000442461 GJB6O95452 261 aa10.71□□□□□ -0.69
LIN54-202ENST00000442461 SEC24AO95486 1093 aa10.71□□□□□ -0.69
LIN54-202ENST00000442461 GCP02774 474 aa10.71□□□□□ -0.69
LIN54-202ENST00000442461 MSL3P1P0C860 447 aa10.71□□□□□ -0.69
LIN54-202ENST00000442461 PSMB9P28065 219 aa10.71□□□□□ -0.69
LIN54-202ENST00000442461 PTGS2P35354 604 aa10.71□□□□□ -0.69
LIN54-202ENST00000442461 SLC5A3P53794 718 aa10.71□□□□□ -0.69
LIN54-202ENST00000442461 DUPD1Q68J44 220 aa10.71□□□□□ -0.69
LIN54-202ENST00000442461 SYTL1Q8IYJ3 562 aa10.71□□□□□ -0.69
LIN54-202ENST00000442461 PQLC1Q8N2U9 271 aa10.71□□□□□ -0.69
LIN54-202ENST00000442461 OR7A2PQ8NGA2 310 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms