RNA–Protein interactions for RNA: ENST00000442447.5

RBM39-215, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-215ENST00000442447 TIGD1Q96MW7 591 aa17.3■□□□□ 0.36
RBM39-215ENST00000442447 GSDMAQ96QA5 445 aa17.3■□□□□ 0.36
RBM39-215ENST00000442447 TRMT61BQ9BVS5 477 aaKnown RBP17.3■□□□□ 0.36
RBM39-215ENST00000442447 FOXQ1Q9C009 403 aa17.3■□□□□ 0.36
RBM39-215ENST00000442447 DPEP3Q9H4B8 488 aa17.3■□□□□ 0.36
RBM39-215ENST00000442447 BRD9Q9H8M2 597 aa17.3■□□□□ 0.36
RBM39-215ENST00000442447 VRTNQ9H8Y1 702 aa17.3■□□□□ 0.36
RBM39-215ENST00000442447 MAGEC2Q9UBF1 373 aaPredicted RBP17.3■□□□□ 0.36
RBM39-215ENST00000442447 PCDHA5Q9Y5H7 936 aa17.3■□□□□ 0.36
RBM39-215ENST00000442447 GADD45BO75293 160 aaPredicted RBP17.29■□□□□ 0.36
RBM39-215ENST00000442447 FAM163BP0C2L3 166 aa17.29■□□□□ 0.36
RBM39-215ENST00000442447 TRIM49P0CI25 452 aa17.29■□□□□ 0.36
RBM39-215ENST00000442447 TRIM49CP0CI26 452 aa17.29■□□□□ 0.36
RBM39-215ENST00000442447 PSMC3P17980 439 aa17.29■□□□□ 0.36
RBM39-215ENST00000442447 BDNFP23560 247 aa17.29■□□□□ 0.36
RBM39-215ENST00000442447 GDI1P31150 447 aa17.29■□□□□ 0.36
RBM39-215ENST00000442447 PIK3CAP42336 1068 aa17.29■□□□□ 0.36
RBM39-215ENST00000442447 PRCPP42785 496 aa17.29■□□□□ 0.36
RBM39-215ENST00000442447 MAGEA11P43364 429 aa17.29■□□□□ 0.36
RBM39-215ENST00000442447 RAP1GAPP47736 663 aa17.29■□□□□ 0.36
RBM39-215ENST00000442447 CDH8P55286 799 aa17.29■□□□□ 0.36
RBM39-215ENST00000442447 NLRP12P59046 1061 aa17.29■□□□□ 0.36
RBM39-215ENST00000442447 STARD6P59095 220 aa17.29■□□□□ 0.36
RBM39-215ENST00000442447 MAPRE1Q15691 268 aaKnown RBP17.29■□□□□ 0.36
RBM39-215ENST00000442447 ZNF667Q5HYK9 610 aa17.29■□□□□ 0.36
RBM39-215ENST00000442447 ZNF658Q5TYW1 1059 aaPredicted RBP17.29■□□□□ 0.36
RBM39-215ENST00000442447 INTS8Q75QN2 995 aaKnown RBP17.29■□□□□ 0.36
RBM39-215ENST00000442447 TMEM150AQ86TG1 271 aa17.29■□□□□ 0.36
RBM39-215ENST00000442447 SPATA20Q8TB22 786 aa17.29■□□□□ 0.36
RBM39-215ENST00000442447 MYCBPAPQ8TBZ2 947 aa17.29■□□□□ 0.36
RBM39-215ENST00000442447 DEPDC1BQ8WUY9 529 aa17.29■□□□□ 0.36
RBM39-215ENST00000442447 EEF2KMTQ96G04 330 aa17.29■□□□□ 0.36
RBM39-215ENST00000442447 PCED1BQ96HM7 432 aa17.29■□□□□ 0.36
RBM39-215ENST00000442447 TASP1Q9H6P5 420 aa17.29■□□□□ 0.36
RBM39-215ENST00000442447 HOOK1Q9UJC3 728 aaKnown RBP17.29■□□□□ 0.36
RBM39-215ENST00000442447 SLC38A8A6NNN8 435 aa17.28■□□□□ 0.36
RBM39-215ENST00000442447 A8MXQ7 604 aa17.28■□□□□ 0.36
RBM39-215ENST00000442447 IKBKBO14920 756 aa17.28■□□□□ 0.36
RBM39-215ENST00000442447 NOL4O94818 638 aa17.28■□□□□ 0.36
RBM39-215ENST00000442447 HLA-DRAP01903 254 aa17.28■□□□□ 0.36
RBM39-215ENST00000442447 F11P03951 625 aa17.28■□□□□ 0.36
RBM39-215ENST00000442447 DCNP07585 359 aaKnown RBP17.28■□□□□ 0.36
RBM39-215ENST00000442447 KRT13P13646 458 aa17.28■□□□□ 0.36
RBM39-215ENST00000442447 PTPN1P18031 435 aaKnown RBP17.28■□□□□ 0.36
RBM39-215ENST00000442447 PSMC2P35998 433 aaKnown RBP17.28■□□□□ 0.36
RBM39-215ENST00000442447 PRKCQQ04759 706 aa17.28■□□□□ 0.36
RBM39-215ENST00000442447 EDRF1Q3B7T1 1238 aa17.28■□□□□ 0.36
RBM39-215ENST00000442447 TPRG1Q6ZUI0 275 aa17.28■□□□□ 0.36
RBM39-215ENST00000442447 MFSD6LQ8IWD5 586 aa17.28■□□□□ 0.36
RBM39-215ENST00000442447 CCDC105Q8IYK2 499 aa17.28■□□□□ 0.36
RBM39-215ENST00000442447 DNASE1L2Q92874 299 aa17.28■□□□□ 0.36
RBM39-215ENST00000442447 E2F7Q96AV8 911 aa17.28■□□□□ 0.36
RBM39-215ENST00000442447 SDCBP2Q9H190 292 aa17.28■□□□□ 0.36
RBM39-215ENST00000442447 MMRN2Q9H8L6 949 aa17.28■□□□□ 0.36
RBM39-215ENST00000442447 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.28■□□□□ 0.361e-6■□□□□ 8.1
RBM39-215ENST00000442447 HEBP1Q9NRV9 189 aa17.28■□□□□ 0.36
RBM39-215ENST00000442447 SIT1Q9Y3P8 196 aa17.28■□□□□ 0.36
RBM39-215ENST00000442447 KANSL1LA0AUZ9 987 aa17.27■□□□□ 0.36
RBM39-215ENST00000442447 H0Y858 1186 aa17.27■□□□□ 0.36
RBM39-215ENST00000442447 ZNF263O14978 683 aa17.27■□□□□ 0.36
RBM39-215ENST00000442447 KINO60870 393 aaKnown RBP17.27■□□□□ 0.36
RBM39-215ENST00000442447 PRAMEF12O95522 483 aa17.27■□□□□ 0.36
RBM39-215ENST00000442447 CD72P21854 359 aa17.27■□□□□ 0.36
RBM39-215ENST00000442447 GRIK1P39086 918 aa17.27■□□□□ 0.36
RBM39-215ENST00000442447 GCLMP48507 274 aa17.27■□□□□ 0.36
RBM39-215ENST00000442447 PPP3CAQ08209 521 aa17.27■□□□□ 0.36
RBM39-215ENST00000442447 SGSM1Q2NKQ1 1148 aa17.27■□□□□ 0.36
RBM39-215ENST00000442447 COBLL1Q53SF7 1204 aa17.27■□□□□ 0.36
RBM39-215ENST00000442447 SPOPLQ6IQ16 392 aa17.27■□□□□ 0.36
RBM39-215ENST00000442447 VSTM1Q6UX27 236 aa17.27■□□□□ 0.36
RBM39-215ENST00000442447 YAF2Q8IY57 180 aa17.27■□□□□ 0.36
RBM39-215ENST00000442447 DTWD2Q8NBA8 298 aa17.27■□□□□ 0.36
RBM39-215ENST00000442447 B3GALNT2Q8NCR0 500 aa17.27■□□□□ 0.36
RBM39-215ENST00000442447 PJA1Q8NG27 643 aa17.27■□□□□ 0.36
RBM39-215ENST00000442447 IRF7Q92985 503 aa17.27■□□□□ 0.36
RBM39-215ENST00000442447 DDX23Q9BUQ8 820 aaKnown RBP17.27■□□□□ 0.36
RBM39-215ENST00000442447 SLC46A2Q9BY10 475 aa17.27■□□□□ 0.36
RBM39-215ENST00000442447 SMG9Q9H0W8 520 aaKnown RBP17.27■□□□□ 0.36
RBM39-215ENST00000442447 UXTQ9UBK9 157 aaPredicted RBP17.27■□□□□ 0.36
RBM39-215ENST00000442447 DPYSL4O14531 572 aa17.26■□□□□ 0.35
RBM39-215ENST00000442447 CETN3O15182 167 aa17.26■□□□□ 0.35
RBM39-215ENST00000442447 LRRN2O75325 713 aa17.26■□□□□ 0.35
RBM39-215ENST00000442447 TADA3O75528 432 aa17.26■□□□□ 0.35
RBM39-215ENST00000442447 ASS1P00966 412 aaKnown RBP17.26■□□□□ 0.35
RBM39-215ENST00000442447 P4HA1P13674 534 aa17.26■□□□□ 0.35
RBM39-215ENST00000442447 ENPEPQ07075 957 aa17.26■□□□□ 0.35
RBM39-215ENST00000442447 UBXN2BQ14CS0 331 aa17.26■□□□□ 0.35
RBM39-215ENST00000442447 ISM2Q6H9L7 571 aa17.26■□□□□ 0.35
RBM39-215ENST00000442447 MAB21L3Q8N8X9 362 aa17.26■□□□□ 0.35
RBM39-215ENST00000442447 MRPS31Q92665 395 aaKnown RBP17.26■□□□□ 0.35
RBM39-215ENST00000442447 TRMT2BQ96GJ1 504 aaKnown RBP17.26■□□□□ 0.35
RBM39-215ENST00000442447 MYRFLQ96LU7 910 aa17.26■□□□□ 0.35
RBM39-215ENST00000442447 LRRC3BQ96PB8 259 aa17.26■□□□□ 0.35
RBM39-215ENST00000442447 PHOX2BQ99453 314 aa17.26■□□□□ 0.35
RBM39-215ENST00000442447 TSG101Q99816 390 aa17.26■□□□□ 0.35
RBM39-215ENST00000442447 ZNF518BQ9C0D4 1074 aa17.26■□□□□ 0.35
RBM39-215ENST00000442447 FAM86C1Q9NVL1 165 aa17.26■□□□□ 0.35
RBM39-215ENST00000442447 MAN1B1Q9UKM7 699 aa17.26■□□□□ 0.35
RBM39-215ENST00000442447 NUP210Q8TEM1 1887 aaPredicted RBP17.25■□□□□ 0.35
RBM39-215ENST00000442447 CLDN5O00501 218 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms