RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 CSH1P0DML2 217 aa10.79□□□□□ -0.68
SYN3-204ENST00000441821 CSH2P0DML3 217 aa10.79□□□□□ -0.68
SYN3-204ENST00000441821 HOXD12P35452 270 aa10.79□□□□□ -0.68
SYN3-204ENST00000441821 P2RY2P41231 377 aa10.79□□□□□ -0.68
SYN3-204ENST00000441821 MRPS21P82921 87 aaKnown RBP10.79□□□□□ -0.68
SYN3-204ENST00000441821 USP4Q13107 963 aa10.79□□□□□ -0.68
SYN3-204ENST00000441821 ME3Q16798 604 aa10.79□□□□□ -0.68
SYN3-204ENST00000441821 ZNF423Q2M1K9 1284 aa10.79□□□□□ -0.68
SYN3-204ENST00000441821 C2orf27AQ580R0 203 aa10.79□□□□□ -0.68
SYN3-204ENST00000441821 TTC38Q5R3I4 469 aa10.79□□□□□ -0.68
SYN3-204ENST00000441821 PEAR1Q5VY43 1037 aaPredicted RBP10.79□□□□□ -0.68
SYN3-204ENST00000441821 KRT79Q5XKE5 535 aa10.79□□□□□ -0.68
SYN3-204ENST00000441821 LMBRD2Q68DH5 695 aaPredicted RBP10.79□□□□□ -0.68
SYN3-204ENST00000441821 RAB44Q7Z6P3 723 aaPredicted RBP10.79□□□□□ -0.68
SYN3-204ENST00000441821 PDZD3Q86UT5 571 aa10.79□□□□□ -0.68
SYN3-204ENST00000441821 TMEFF1Q8IYR6 380 aa10.79□□□□□ -0.68
SYN3-204ENST00000441821 DCP1BQ8IZD4 617 aaKnown RBP10.79□□□□□ -0.68
SYN3-204ENST00000441821 CHCHD4Q8N4Q1 142 aa10.79□□□□□ -0.68
SYN3-204ENST00000441821 KCNN1Q92952 543 aa10.79□□□□□ -0.68
SYN3-204ENST00000441821 FNBP1Q96RU3 617 aa10.79□□□□□ -0.68
SYN3-204ENST00000441821 RAB34Q9BZG1 259 aa10.79□□□□□ -0.68
SYN3-204ENST00000441821 TMEM206Q9H813 350 aa10.79□□□□□ -0.68
SYN3-204ENST00000441821 ABI2Q9NYB9 513 aaPredicted RBP10.79□□□□□ -0.68
SYN3-204ENST00000441821 UXTQ9UBK9 157 aaPredicted RBP10.79□□□□□ -0.68
SYN3-204ENST00000441821 DERAQ9Y315 318 aa10.79□□□□□ -0.68
SYN3-204ENST00000441821 PCDHB5Q9Y5E4 795 aa10.79□□□□□ -0.68
SYN3-204ENST00000441821 WNT6Q9Y6F9 365 aa10.79□□□□□ -0.68
SYN3-204ENST00000441821 ZNF638Q14966 1978 aaKnown RBP10.79□□□□□ -0.68
SYN3-204ENST00000441821 OBSL1O75147 1896 aa10.78□□□□□ -0.68
SYN3-204ENST00000441821 H0YCG3 227 aa10.78□□□□□ -0.68
SYN3-204ENST00000441821 MAP3K13O43283 966 aa10.78□□□□□ -0.68
SYN3-204ENST00000441821 TADA3O75528 432 aa10.78□□□□□ -0.68
SYN3-204ENST00000441821 NOL4O94818 638 aa10.78□□□□□ -0.68
SYN3-204ENST00000441821 TCF3P15923 654 aa10.78□□□□□ -0.68
SYN3-204ENST00000441821 CDC25AP30304 524 aa10.78□□□□□ -0.68
SYN3-204ENST00000441821 OPRD1P41143 372 aa10.78□□□□□ -0.68
SYN3-204ENST00000441821 PTGER3P43115 390 aa10.78□□□□□ -0.68
SYN3-204ENST00000441821 TRAPPC10P48553 1259 aa10.78□□□□□ -0.68
SYN3-204ENST00000441821 ATXN3P54252 364 aaPredicted RBP10.78□□□□□ -0.68
SYN3-204ENST00000441821 SEC13P55735 322 aa10.78□□□□□ -0.68
SYN3-204ENST00000441821 SCAPQ12770 1279 aa10.78□□□□□ -0.68
SYN3-204ENST00000441821 HNRNPDQ14103 355 aaKnown RBP10.78□□□□□ -0.68
SYN3-204ENST00000441821 JADE1Q6IE81 842 aa10.78□□□□□ -0.68
SYN3-204ENST00000441821 C19orf48Q6RUI8 117 aa10.78□□□□□ -0.68
SYN3-204ENST00000441821 TMEM92Q6UXU6 159 aa10.78□□□□□ -0.68
SYN3-204ENST00000441821 EFCAB13Q8IY85 973 aa10.78□□□□□ -0.68
SYN3-204ENST00000441821 HDDC3Q8N4P3 179 aa10.78□□□□□ -0.68
SYN3-204ENST00000441821 CCDC33Q8N5R6 958 aa10.78□□□□□ -0.68
SYN3-204ENST00000441821 CEP76Q8TAP6 659 aa10.78□□□□□ -0.68
SYN3-204ENST00000441821 WHAMMQ8TF30 809 aa10.78□□□□□ -0.68
SYN3-204ENST00000441821 RLN3Q8WXF3 142 aa10.78□□□□□ -0.68
SYN3-204ENST00000441821 BICD1Q96G01 975 aa10.78□□□□□ -0.68
SYN3-204ENST00000441821 TRMT2BQ96GJ1 504 aaKnown RBP10.78□□□□□ -0.68
SYN3-204ENST00000441821 SPACA7Q96KW9 195 aa10.78□□□□□ -0.68
SYN3-204ENST00000441821 MYRFLQ96LU7 910 aa10.78□□□□□ -0.68
SYN3-204ENST00000441821 SLC22A12Q96S37 553 aa10.78□□□□□ -0.68
SYN3-204ENST00000441821 CYP2S1Q96SQ9 504 aa10.78□□□□□ -0.68
SYN3-204ENST00000441821 CCSER1Q9C0I3 900 aa10.78□□□□□ -0.68
SYN3-204ENST00000441821 FOXP1Q9H334 677 aaPredicted RBP10.78□□□□□ -0.68
SYN3-204ENST00000441821 MBD1Q9UIS9 605 aaPredicted RBP10.78□□□□□ -0.68
SYN3-204ENST00000441821 PILRBQ9UKJ0 227 aa10.78□□□□□ -0.68
SYN3-204ENST00000441821 SLC6A14Q9UN76 642 aa10.78□□□□□ -0.68
SYN3-204ENST00000441821 MAGED2Q9UNF1 606 aaPredicted RBP10.78□□□□□ -0.68
SYN3-204ENST00000441821 TNRC6BQ9UPQ9 1833 aaKnown RBP10.78□□□□□ -0.68
SYN3-204ENST00000441821 ASCC3Q8N3C0 2202 aaKnown RBP10.78□□□□□ -0.68
SYN3-204ENST00000441821 ANK1P16157 1881 aa10.77□□□□□ -0.69
SYN3-204ENST00000441821 TRAV19A0A0A6YYK7 116 aa10.77□□□□□ -0.69
SYN3-204ENST00000441821 A0A0B4J269 797 aa10.77□□□□□ -0.69
SYN3-204ENST00000441821 PCNX2A6NKB5 2137 aa10.77□□□□□ -0.69
SYN3-204ENST00000441821 KALRNO60229 2985 aa10.77□□□□□ -0.69
SYN3-204ENST00000441821 OPHN1O60890 802 aa10.77□□□□□ -0.69
SYN3-204ENST00000441821 PRPF40AO75400 957 aaKnown RBP10.77□□□□□ -0.69
SYN3-204ENST00000441821 NFATC1O95644 943 aa10.77□□□□□ -0.69
SYN3-204ENST00000441821 CKMP06732 381 aa10.77□□□□□ -0.69
SYN3-204ENST00000441821 NFICP08651 508 aa10.77□□□□□ -0.69
SYN3-204ENST00000441821 HNRNPLP14866 589 aaKnown RBP eCLIP10.77□□□□□ -0.69
SYN3-204ENST00000441821 GPR15P49685 360 aa10.77□□□□□ -0.69
SYN3-204ENST00000441821 TAF6P49848 677 aa10.77□□□□□ -0.69
SYN3-204ENST00000441821 LIG4P49917 911 aa10.77□□□□□ -0.69
SYN3-204ENST00000441821 NCKAP1LP55160 1127 aa10.77□□□□□ -0.69
SYN3-204ENST00000441821 FAM193AP78312 1265 aa10.77□□□□□ -0.69
SYN3-204ENST00000441821 GUCY1B3Q02153 619 aa10.77□□□□□ -0.69
SYN3-204ENST00000441821 RAD51AP2Q09MP3 1159 aa10.77□□□□□ -0.69
SYN3-204ENST00000441821 BYSLQ13895 437 aaKnown RBP10.77□□□□□ -0.69
SYN3-204ENST00000441821 TMEM132DQ14C87 1099 aa10.77□□□□□ -0.69
SYN3-204ENST00000441821 NFE2Q16621 373 aaPredicted RBP10.77□□□□□ -0.69
SYN3-204ENST00000441821 DUOXA1Q1HG43 343 aa10.77□□□□□ -0.69
SYN3-204ENST00000441821 MAP7D1Q3KQU3 841 aa10.77□□□□□ -0.69
SYN3-204ENST00000441821 HSF5Q4G112 596 aaPredicted RBP10.77□□□□□ -0.69
SYN3-204ENST00000441821 LYSMD4Q5XG99 296 aa10.77□□□□□ -0.69
SYN3-204ENST00000441821 WSCD1Q658N2 575 aa10.77□□□□□ -0.69
SYN3-204ENST00000441821 ARMCX6Q7L4S7 300 aa10.77□□□□□ -0.69
SYN3-204ENST00000441821 KCNK18Q7Z418 384 aa10.77□□□□□ -0.69
SYN3-204ENST00000441821 TTC30AQ86WT1 665 aa10.77□□□□□ -0.69
SYN3-204ENST00000441821 FAM212AQ96EL1 285 aa10.77□□□□□ -0.69
SYN3-204ENST00000441821 PYM1Q9BRP8 204 aaKnown RBP10.77□□□□□ -0.69
SYN3-204ENST00000441821 PI4K2AQ9BTU6 479 aa10.77□□□□□ -0.69
SYN3-204ENST00000441821 LINC00597Q9H2U6 94 aa10.77□□□□□ -0.69
SYN3-204ENST00000441821 TRPC7Q9HCX4 862 aa10.77□□□□□ -0.69
SYN3-204ENST00000441821 POLMQ9NP87 494 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms