RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 HMGA1P17096 107 aaKnown RBP14.67□□□□□ -0.06
LTBR-202ENST00000440421 BDNFP23560 247 aa14.67□□□□□ -0.06
LTBR-202ENST00000440421 CDC25CP30307 473 aa14.67□□□□□ -0.06
LTBR-202ENST00000440421 PMS1P54277 932 aaKnown RBP14.67□□□□□ -0.06
LTBR-202ENST00000440421 PPP3CAQ08209 521 aa14.67□□□□□ -0.06
LTBR-202ENST00000440421 MAPRE1Q15691 268 aaKnown RBP14.67□□□□□ -0.06
LTBR-202ENST00000440421 SGSM1Q2NKQ1 1148 aa14.67□□□□□ -0.06
LTBR-202ENST00000440421 CFAP221Q4G0U5 840 aa14.67□□□□□ -0.06
LTBR-202ENST00000440421 ARHGAP15Q53QZ3 475 aa14.67□□□□□ -0.06
LTBR-202ENST00000440421 ANKRD40Q6AI12 368 aa14.67□□□□□ -0.06
LTBR-202ENST00000440421 SPOPLQ6IQ16 392 aa14.67□□□□□ -0.06
LTBR-202ENST00000440421 VITQ6UXI7 678 aa14.67□□□□□ -0.06
LTBR-202ENST00000440421 MYCBPAPQ8TBZ2 947 aa14.67□□□□□ -0.06
LTBR-202ENST00000440421 PCED1BQ96HM7 432 aa14.67□□□□□ -0.06
LTBR-202ENST00000440421 FUBP3Q96I24 572 aaKnown RBP eCLIP14.67□□□□□ -0.06
LTBR-202ENST00000440421 MKNK1Q9BUB5 465 aa14.67□□□□□ -0.06
LTBR-202ENST00000440421 SDCBP2Q9H190 292 aa14.67□□□□□ -0.06
LTBR-202ENST00000440421 VRTNQ9H8Y1 702 aa14.67□□□□□ -0.06
LTBR-202ENST00000440421 TBC1D17Q9HA65 648 aa14.67□□□□□ -0.06
LTBR-202ENST00000440421 NCANO14594 1321 aa14.66□□□□□ -0.06
LTBR-202ENST00000440421 COL4A3Q01955 1670 aa14.66□□□□□ -0.06
LTBR-202ENST00000440421 TRIM49BA6NDI0 452 aa14.66□□□□□ -0.06
LTBR-202ENST00000440421 BIN1O00499 593 aa14.66□□□□□ -0.06
LTBR-202ENST00000440421 FAM163BP0C2L3 166 aa14.66□□□□□ -0.06
LTBR-202ENST00000440421 EPB41P11171 864 aaKnown RBP14.66□□□□□ -0.06
LTBR-202ENST00000440421 PTPN1P18031 435 aaKnown RBP14.66□□□□□ -0.06
LTBR-202ENST00000440421 GRIK1P39086 918 aa14.66□□□□□ -0.06
LTBR-202ENST00000440421 CLCN5P51795 746 aa14.66□□□□□ -0.06
LTBR-202ENST00000440421 NLRP12P59046 1061 aa14.66□□□□□ -0.06
LTBR-202ENST00000440421 PFKPQ01813 784 aa14.66□□□□□ -0.06
LTBR-202ENST00000440421 COBLL1Q53SF7 1204 aa14.66□□□□□ -0.06
LTBR-202ENST00000440421 ARID3BQ8IVW6 561 aaPredicted RBP14.66□□□□□ -0.06
LTBR-202ENST00000440421 ELOA2Q8IYF1 753 aaPredicted RBP14.66□□□□□ -0.06
LTBR-202ENST00000440421 ADSSL1Q8N142 457 aa14.66□□□□□ -0.06
LTBR-202ENST00000440421 PRSS33Q8NF86 280 aa14.66□□□□□ -0.06
LTBR-202ENST00000440421 RSPRY1Q96DX4 576 aa14.66□□□□□ -0.06
LTBR-202ENST00000440421 TRMT61BQ9BVS5 477 aaKnown RBP14.66□□□□□ -0.06
LTBR-202ENST00000440421 BRD9Q9H8M2 597 aa14.66□□□□□ -0.06
LTBR-202ENST00000440421 ARIH1Q9Y4X5 557 aaPredicted RBP14.66□□□□□ -0.06
LTBR-202ENST00000440421 ZDBF2Q9HCK1 2354 aa14.65□□□□□ -0.06
LTBR-202ENST00000440421 HEPACAM2A8MVW5 462 aa14.65□□□□□ -0.06
LTBR-202ENST00000440421 PSMA7O14818 248 aa14.65□□□□□ -0.06
LTBR-202ENST00000440421 ASS1P00966 412 aaKnown RBP14.65□□□□□ -0.06
LTBR-202ENST00000440421 F11P03951 625 aa14.65□□□□□ -0.06
LTBR-202ENST00000440421 P4HA1P13674 534 aa14.65□□□□□ -0.06
LTBR-202ENST00000440421 CD44P16070 742 aaKnown RBP14.65□□□□□ -0.06
LTBR-202ENST00000440421 PSMC3P17980 439 aa14.65□□□□□ -0.06
LTBR-202ENST00000440421 AOC1P19801 751 aa14.65□□□□□ -0.06
LTBR-202ENST00000440421 GDI1P31150 447 aa14.65□□□□□ -0.06
LTBR-202ENST00000440421 MAGEA11P43364 429 aa14.65□□□□□ -0.06
LTBR-202ENST00000440421 STIM1Q13586 685 aa14.65□□□□□ -0.06
LTBR-202ENST00000440421 MLF2Q15773 248 aaPredicted RBP14.65□□□□□ -0.06
LTBR-202ENST00000440421 SLC44A4Q53GD3 710 aa14.65□□□□□ -0.06
LTBR-202ENST00000440421 KLHL10Q6JEL2 608 aa14.65□□□□□ -0.06
LTBR-202ENST00000440421 TMEM150AQ86TG1 271 aa14.65□□□□□ -0.06
LTBR-202ENST00000440421 B3GALNT2Q8NCR0 500 aa14.65□□□□□ -0.06
LTBR-202ENST00000440421 TAS1R2Q8TE23 839 aa14.65□□□□□ -0.06
LTBR-202ENST00000440421 TAF4BQ92750 862 aa14.65□□□□□ -0.06
LTBR-202ENST00000440421 FAM122AQ96E09 287 aa14.65□□□□□ -0.06
LTBR-202ENST00000440421 GTPBP4Q9BZE4 634 aaKnown RBP14.65□□□□□ -0.06
LTBR-202ENST00000440421 SMG9Q9H0W8 520 aaKnown RBP14.65□□□□□ -0.06
LTBR-202ENST00000440421 KCNH6Q9H252 994 aa14.65□□□□□ -0.06
LTBR-202ENST00000440421 TASP1Q9H6P5 420 aa14.65□□□□□ -0.06
LTBR-202ENST00000440421 TRPV4Q9HBA0 871 aa14.65□□□□□ -0.06
LTBR-202ENST00000440421 CLDN5O00501 218 aa14.64□□□□□ -0.07
LTBR-202ENST00000440421 DPYSL4O14531 572 aa14.64□□□□□ -0.07
LTBR-202ENST00000440421 LRRN2O75325 713 aa14.64□□□□□ -0.07
LTBR-202ENST00000440421 NOL4O94818 638 aa14.64□□□□□ -0.07
LTBR-202ENST00000440421 PRAMEF12O95522 483 aa14.64□□□□□ -0.07
LTBR-202ENST00000440421 ANXA13P27216 316 aa14.64□□□□□ -0.07
LTBR-202ENST00000440421 PLA2G5P39877 138 aa14.64□□□□□ -0.07
LTBR-202ENST00000440421 ASPAP45381 313 aa14.64□□□□□ -0.07
LTBR-202ENST00000440421 UBE2HP62256 183 aa14.64□□□□□ -0.07
LTBR-202ENST00000440421 FKBP3Q00688 224 aaKnown RBP14.64□□□□□ -0.07
LTBR-202ENST00000440421 ORC1Q13415 861 aa14.64□□□□□ -0.07
LTBR-202ENST00000440421 CAMK4Q16566 473 aa14.64□□□□□ -0.07
LTBR-202ENST00000440421 DCAF17Q5H9S7 520 aaPredicted RBP14.64□□□□□ -0.07
LTBR-202ENST00000440421 TCERG1LQ5VWI1 586 aa14.64□□□□□ -0.07
LTBR-202ENST00000440421 VSTM1Q6UX27 236 aa14.64□□□□□ -0.07
LTBR-202ENST00000440421 YAF2Q8IY57 180 aa14.64□□□□□ -0.07
LTBR-202ENST00000440421 MAB21L3Q8N8X9 362 aa14.64□□□□□ -0.07
LTBR-202ENST00000440421 DEPDC1BQ8WUY9 529 aa14.64□□□□□ -0.07
LTBR-202ENST00000440421 SHDQ96IW2 340 aa14.64□□□□□ -0.07
LTBR-202ENST00000440421 SLC46A2Q9BY10 475 aa14.64□□□□□ -0.07
LTBR-202ENST00000440421 B3GNT5Q9BYG0 378 aa14.64□□□□□ -0.07
LTBR-202ENST00000440421 IMPG2Q9BZV3 1241 aa14.64□□□□□ -0.07
LTBR-202ENST00000440421 FOXQ1Q9C009 403 aa14.64□□□□□ -0.07
LTBR-202ENST00000440421 ZNF518BQ9C0D4 1074 aa14.64□□□□□ -0.07
LTBR-202ENST00000440421 TMEM8AQ9HCN3 771 aa14.64□□□□□ -0.07
LTBR-202ENST00000440421 HEBP1Q9NRV9 189 aa14.64□□□□□ -0.07
LTBR-202ENST00000440421 HMGXB4Q9UGU5 601 aa14.64□□□□□ -0.07
LTBR-202ENST00000440421 F8VP50 259 aa14.63□□□□□ -0.07
LTBR-202ENST00000440421 ZNF263O14978 683 aa14.63□□□□□ -0.07
LTBR-202ENST00000440421 TADA3O75528 432 aa14.63□□□□□ -0.07
LTBR-202ENST00000440421 CD72P21854 359 aa14.63□□□□□ -0.07
LTBR-202ENST00000440421 BMP6P22004 513 aa14.63□□□□□ -0.07
LTBR-202ENST00000440421 CCNE1P24864 410 aa14.63□□□□□ -0.07
LTBR-202ENST00000440421 MXI1P50539 228 aa14.63□□□□□ -0.07
LTBR-202ENST00000440421 NDST1P52848 882 aa14.63□□□□□ -0.07
LTBR-202ENST00000440421 CACNA2D1P54289 1103 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms