RNA–Protein interactions for RNA: ENST00000440223.5

UBE2F-214, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 830 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-214ENST00000440223 SNX9Q9Y5X1 595 aa17.06■□□□□ 0.32
UBE2F-214ENST00000440223 ADGRG1Q9Y653 693 aa17.06■□□□□ 0.32
UBE2F-214ENST00000440223 GRXCR2A6NFK2 248 aa17.05■□□□□ 0.32
UBE2F-214ENST00000440223 SPDYE4A6NLX3 237 aa17.05■□□□□ 0.32
UBE2F-214ENST00000440223 SYN3O14994 580 aa17.05■□□□□ 0.32
UBE2F-214ENST00000440223 MBTPS2O43462 519 aa17.05■□□□□ 0.32
UBE2F-214ENST00000440223 HUS1O60921 280 aa17.05■□□□□ 0.32
UBE2F-214ENST00000440223 GLUD1P00367 558 aa17.05■□□□□ 0.32
UBE2F-214ENST00000440223 ACO1P21399 889 aaKnown RBP17.05■□□□□ 0.32
UBE2F-214ENST00000440223 FGFR3P22607 806 aa17.05■□□□□ 0.32
UBE2F-214ENST00000440223 BRCC3P46736 316 aa17.05■□□□□ 0.32
UBE2F-214ENST00000440223 CLCN4P51793 760 aa17.05■□□□□ 0.32
UBE2F-214ENST00000440223 SLC18A3Q16572 532 aa17.05■□□□□ 0.32
UBE2F-214ENST00000440223 CD300LGQ6UXG3 332 aa17.05■□□□□ 0.32
UBE2F-214ENST00000440223 ANKS3Q6ZW76 656 aa17.05■□□□□ 0.32
UBE2F-214ENST00000440223 ZNF571Q7Z3V5 609 aaPredicted RBP17.05■□□□□ 0.32
UBE2F-214ENST00000440223 UBR7Q8N806 425 aa17.05■□□□□ 0.32
UBE2F-214ENST00000440223 SLC22A17Q8WUG5 538 aa17.05■□□□□ 0.32
UBE2F-214ENST00000440223 ELMO3Q96BJ8 720 aa17.05■□□□□ 0.32
UBE2F-214ENST00000440223 AGPAT1Q99943 283 aa17.05■□□□□ 0.32
UBE2F-214ENST00000440223 DESI2Q9BSY9 194 aa17.05■□□□□ 0.32
UBE2F-214ENST00000440223 PDCL3Q9H2J4 239 aa17.05■□□□□ 0.32
UBE2F-214ENST00000440223 CNTN6Q9UQ52 1028 aa17.05■□□□□ 0.32
UBE2F-214ENST00000440223 TSC2P49815 1807 aa17.05■□□□□ 0.32
UBE2F-214ENST00000440223 KPNA7A9QM74 516 aa17.04■□□□□ 0.32
UBE2F-214ENST00000440223 LCA5LO95447 670 aa17.04■□□□□ 0.32
UBE2F-214ENST00000440223 C1RP00736 705 aa17.04■□□□□ 0.32
UBE2F-214ENST00000440223 CYP11B1P15538 503 aa17.04■□□□□ 0.32
UBE2F-214ENST00000440223 EPCAMP16422 314 aa17.04■□□□□ 0.32
UBE2F-214ENST00000440223 TKTP29401 623 aaKnown RBP17.04■□□□□ 0.32
UBE2F-214ENST00000440223 GNA15P30679 374 aa17.04■□□□□ 0.32
UBE2F-214ENST00000440223 CLCN1P35523 988 aa17.04■□□□□ 0.32
UBE2F-214ENST00000440223 ARHGAP29Q52LW3 1261 aa17.04■□□□□ 0.32
UBE2F-214ENST00000440223 PPP1R2P3Q6NXS1 205 aa17.04■□□□□ 0.32
UBE2F-214ENST00000440223 PRSS55Q6UWB4 352 aaPredicted RBP17.04■□□□□ 0.32
UBE2F-214ENST00000440223 ACRBPQ8NEB7 543 aa17.04■□□□□ 0.32
UBE2F-214ENST00000440223 APPL2Q8NEU8 664 aa17.04■□□□□ 0.32
UBE2F-214ENST00000440223 EPS8L1Q8TE68 723 aa17.04■□□□□ 0.32
UBE2F-214ENST00000440223 SUSD3Q96L08 255 aa17.04■□□□□ 0.32
UBE2F-214ENST00000440223 TSGA10Q9BZW7 698 aa17.04■□□□□ 0.32
UBE2F-214ENST00000440223 SMYD3Q9H7B4 428 aa17.04■□□□□ 0.32
UBE2F-214ENST00000440223 SPTLC3Q9NUV7 552 aa17.04■□□□□ 0.32
UBE2F-214ENST00000440223 GDAP2Q9NXN4 497 aa17.04■□□□□ 0.32
UBE2F-214ENST00000440223 MTCL1Q9Y4B5 1905 aaKnown RBP17.04■□□□□ 0.32
UBE2F-214ENST00000440223 ATP8B3O60423 1300 aa17.03■□□□□ 0.32
UBE2F-214ENST00000440223 I3L4J1 428 aa17.03■□□□□ 0.32
UBE2F-214ENST00000440223 PPEF2O14830 753 aa17.03■□□□□ 0.32
UBE2F-214ENST00000440223 MED7O43513 233 aa17.03■□□□□ 0.32
UBE2F-214ENST00000440223 PAEPP09466 180 aa17.03■□□□□ 0.32
UBE2F-214ENST00000440223 WEE2P0C1S8 567 aa17.03■□□□□ 0.32
UBE2F-214ENST00000440223 FAM163BP0C2L3 166 aa17.03■□□□□ 0.32
UBE2F-214ENST00000440223 IL9P15248 144 aa17.03■□□□□ 0.32
UBE2F-214ENST00000440223 RAP1GAPP47736 663 aa17.03■□□□□ 0.32
UBE2F-214ENST00000440223 CDR2Q01850 454 aa17.03■□□□□ 0.32
UBE2F-214ENST00000440223 ITIH3Q06033 890 aa17.03■□□□□ 0.32
UBE2F-214ENST00000440223 INCA1Q0VD86 236 aa17.03■□□□□ 0.32
UBE2F-214ENST00000440223 ASTE1Q2TB18 679 aaPredicted RBP17.03■□□□□ 0.32
UBE2F-214ENST00000440223 CES5AQ6NT32 575 aa17.03■□□□□ 0.32
UBE2F-214ENST00000440223 TRIM72Q6ZMU5 477 aa17.03■□□□□ 0.32
UBE2F-214ENST00000440223 DPH6Q7L8W6 267 aa17.03■□□□□ 0.32
UBE2F-214ENST00000440223 GLYCTKQ8IVS8 523 aa17.03■□□□□ 0.32
UBE2F-214ENST00000440223 TOP6BLQ8N6T0 577 aa17.03■□□□□ 0.32
UBE2F-214ENST00000440223 LNX1Q8TBB1 728 aaPredicted RBP17.03■□□□□ 0.32
UBE2F-214ENST00000440223 UHRF1Q96T88 793 aaPredicted RBP17.03■□□□□ 0.32
UBE2F-214ENST00000440223 SNX25Q9H3E2 840 aa17.03■□□□□ 0.32
UBE2F-214ENST00000440223 SFXN1Q9H9B4 322 aa17.03■□□□□ 0.32
UBE2F-214ENST00000440223 TRMT1Q9NXH9 659 aaKnown RBP17.03■□□□□ 0.32
UBE2F-214ENST00000440223 ADAMTS1Q9UHI8 967 aa17.03■□□□□ 0.32
UBE2F-214ENST00000440223 H7C4K7 107 aa17.02■□□□□ 0.32
UBE2F-214ENST00000440223 THAP12O43422 761 aa17.02■□□□□ 0.32
UBE2F-214ENST00000440223 ZNF500O60304 480 aaPredicted RBP17.02■□□□□ 0.32
UBE2F-214ENST00000440223 CILPO75339 1184 aa17.02■□□□□ 0.32
UBE2F-214ENST00000440223 RPL17P18621 184 aaKnown RBP17.02■□□□□ 0.32
UBE2F-214ENST00000440223 IGFBP6P24592 240 aaPredicted RBP17.02■□□□□ 0.32
UBE2F-214ENST00000440223 MAGEA1P43355 309 aa17.02■□□□□ 0.32
UBE2F-214ENST00000440223 VAV2P52735 878 aa17.02■□□□□ 0.32
UBE2F-214ENST00000440223 ZNF132P52740 706 aa17.02■□□□□ 0.32
UBE2F-214ENST00000440223 LILRA4P59901 499 aa17.02■□□□□ 0.32
UBE2F-214ENST00000440223 GFPT1Q06210 699 aaPredicted RBP17.02■□□□□ 0.32
UBE2F-214ENST00000440223 SMAD2Q15796 467 aaKnown RBP17.02■□□□□ 0.32
UBE2F-214ENST00000440223 TAF3Q5VWG9 929 aa17.02■□□□□ 0.32
UBE2F-214ENST00000440223 SYCE2Q6PIF2 218 aa17.02■□□□□ 0.32
UBE2F-214ENST00000440223 DSTYKQ6XUX3 929 aa17.02■□□□□ 0.32
UBE2F-214ENST00000440223 NOP9Q86U38 636 aaKnown RBP17.02■□□□□ 0.32
UBE2F-214ENST00000440223 SLC47A2Q86VL8 602 aa17.02■□□□□ 0.32
UBE2F-214ENST00000440223 UNC93AQ86WB7 457 aa17.02■□□□□ 0.32
UBE2F-214ENST00000440223 TMEM86AQ8N2M4 240 aa17.02■□□□□ 0.32
UBE2F-214ENST00000440223 PPP1R13BQ96KQ4 1090 aa17.02■□□□□ 0.32
UBE2F-214ENST00000440223 COL25A1Q9BXS0 654 aaPredicted RBP17.02■□□□□ 0.32
UBE2F-214ENST00000440223 MAN1C1Q9NR34 630 aa17.02■□□□□ 0.32
UBE2F-214ENST00000440223 MTRRQ9UBK8 725 aa17.02■□□□□ 0.32
UBE2F-214ENST00000440223 PRKAG3Q9UGI9 489 aa17.02■□□□□ 0.32
UBE2F-214ENST00000440223 NOCTQ9UK39 431 aaKnown RBP17.02■□□□□ 0.32
UBE2F-214ENST00000440223 PCDHB8Q9UN66 801 aa17.02■□□□□ 0.32
UBE2F-214ENST00000440223 USP15Q9Y4E8 981 aaPredicted RBP17.02■□□□□ 0.32
UBE2F-214ENST00000440223 CEP83Q9Y592 693 aa17.02■□□□□ 0.32
UBE2F-214ENST00000440223 PCDHA13Q9Y5I0 950 aa17.02■□□□□ 0.32
UBE2F-214ENST00000440223 BACE2Q9Y5Z0 518 aa17.02■□□□□ 0.32
UBE2F-214ENST00000440223 M0QZQ0 153 aa17.01■□□□□ 0.31
UBE2F-214ENST00000440223 KIF2AO00139 706 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms