RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 TTC5Q8N0Z6 440 aa4.02□□□□□ -1.77
HMGB3P11-201ENST00000440127 CNTROBQ8N137 903 aa4.02□□□□□ -1.77
HMGB3P11-201ENST00000440127 CLASRPQ8N2M8 674 aaKnown RBP4.02□□□□□ -1.77
HMGB3P11-201ENST00000440127 FAM43AQ8N2R8 423 aa4.02□□□□□ -1.77
HMGB3P11-201ENST00000440127 RNF169Q8NCN4 708 aa4.02□□□□□ -1.77
HMGB3P11-201ENST00000440127 JPH3Q8WXH2 748 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P11-201ENST00000440127 AHCYL2Q96HN2 611 aaKnown RBP4.02□□□□□ -1.77
HMGB3P11-201ENST00000440127 FUBP3Q96I24 572 aaKnown RBP eCLIP4.02□□□□□ -1.77
HMGB3P11-201ENST00000440127 SLC13A1Q9BZW2 595 aa4.02□□□□□ -1.77
HMGB3P11-201ENST00000440127 ZNF700Q9H0M5 742 aa4.02□□□□□ -1.77
HMGB3P11-201ENST00000440127 QRSL1Q9H0R6 528 aaKnown RBP4.02□□□□□ -1.77
HMGB3P11-201ENST00000440127 TCF7L1Q9HCS4 588 aa4.02□□□□□ -1.77
HMGB3P11-201ENST00000440127 EDARQ9UNE0 448 aa4.02□□□□□ -1.77
HMGB3P11-201ENST00000440127 USP15Q9Y4E8 981 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P11-201ENST00000440127 KDM3BQ7LBC6 1761 aa4.02□□□□□ -1.77
HMGB3P11-201ENST00000440127 ABCC6O95255 1503 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 USP42Q9H9J4 1324 aaKnown RBP4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 CAMTA1Q9Y6Y1 1673 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 PIPSLA2A3N6 862 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 GOLGA6L3A6NEY3 463 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 LEFTY2O00292 366 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 ORC4O43929 436 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 POMCP01189 267 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 IFIT2P09913 472 aaKnown RBP4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 RAP2AP10114 183 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 MYL6BP14649 208 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 FDXRP22570 491 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 CD38P28907 300 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 ADSLP30566 484 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 ADRA1BP35368 520 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 GCKRQ14397 625 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 PDCD1Q15116 288 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 PTPN21Q16825 1174 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 TMEM240Q5SV17 173 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 AGAP9Q5VTM2 703 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 Q6ZPA2 131 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 CLEC17AQ6ZS10 378 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 TOM1L2Q6ZVM7 507 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 BRINP3Q76B58 766 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 COPS6Q7L5N1 327 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 DGKHQ86XP1 1220 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 UNC5CLQ8IV45 518 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 VRK3Q8IV63 474 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 PQLC1Q8N2U9 271 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 SAMD3Q8N6K7 520 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 RUFY2Q8WXA3 655 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 SUCLG2Q96I99 432 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 MYD88Q99836 296 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 WDR11Q9BZH6 1224 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 ZNF768Q9H5H4 540 aaKnown RBP4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 PRDM11Q9NQV5 511 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 ECHDC1Q9NTX5 307 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 TBCCD1Q9NVR7 557 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 DNAJC28Q9NX36 388 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 FAM30AQ9NZY2 134 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 TESQ9UGI8 421 aaKnown RBP4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 DMTF1Q9Y222 760 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 LUC7L2Q9Y383 392 aaKnown RBP4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 INSL6Q9Y581 213 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 USP16Q9Y5T5 823 aa4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 KDM6AO15550 1401 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P11-201ENST00000440127 ALS2Q96Q42 1657 aa4□□□□□ -1.77
HMGB3P11-201ENST00000440127 CXorf49A8MYA2 514 aaPredicted RBP4□□□□□ -1.77
HMGB3P11-201ENST00000440127 ERVV-2B6SEH9 535 aa4□□□□□ -1.77
HMGB3P11-201ENST00000440127 HIP1O00291 1037 aa4□□□□□ -1.77
HMGB3P11-201ENST00000440127 BAG4O95429 457 aaKnown RBP4□□□□□ -1.77
HMGB3P11-201ENST00000440127 CFIP05156 583 aa4□□□□□ -1.77
HMGB3P11-201ENST00000440127 IGKV5-2P06315 115 aa4□□□□□ -1.77
HMGB3P11-201ENST00000440127 FBLP22087 321 aaKnown RBP4□□□□□ -1.77
HMGB3P11-201ENST00000440127 HSPA4P34932 840 aa4□□□□□ -1.77
HMGB3P11-201ENST00000440127 CHN2P52757 468 aa4□□□□□ -1.77
HMGB3P11-201ENST00000440127 SCAND1P57086 179 aa4□□□□□ -1.77
HMGB3P11-201ENST00000440127 RAP2BP61225 183 aa4□□□□□ -1.77
HMGB3P11-201ENST00000440127 KRT85P78386 507 aa4□□□□□ -1.77
HMGB3P11-201ENST00000440127 CREMQ03060 361 aa4□□□□□ -1.77
HMGB3P11-201ENST00000440127 MGAT2Q10469 447 aa4□□□□□ -1.77
HMGB3P11-201ENST00000440127 KLF1Q13351 362 aaPredicted RBP4□□□□□ -1.77
HMGB3P11-201ENST00000440127 MPP3Q13368 585 aa4□□□□□ -1.77
HMGB3P11-201ENST00000440127 GFOD2Q3B7J2 385 aa4□□□□□ -1.77
HMGB3P11-201ENST00000440127 PDCD4Q53EL6 469 aaKnown RBP4□□□□□ -1.77
HMGB3P11-201ENST00000440127 MFSD14BQ5SR56 506 aa4□□□□□ -1.77
HMGB3P11-201ENST00000440127 FAM102AQ5T9C2 384 aaPredicted RBP4□□□□□ -1.77
HMGB3P11-201ENST00000440127 TSHZ1Q6ZSZ6 1077 aa4□□□□□ -1.77
HMGB3P11-201ENST00000440127 AACSQ86V21 672 aa4□□□□□ -1.77
HMGB3P11-201ENST00000440127 PRIMA1Q86XR5 153 aa4□□□□□ -1.77
HMGB3P11-201ENST00000440127 TPH2Q8IWU9 490 aa4□□□□□ -1.77
HMGB3P11-201ENST00000440127 COLGALT2Q8IYK4 626 aa4□□□□□ -1.77
HMGB3P11-201ENST00000440127 CMTR2Q8IYT2 770 aaKnown RBP4□□□□□ -1.77
HMGB3P11-201ENST00000440127 BEND2Q8NDZ0 799 aa4□□□□□ -1.77
HMGB3P11-201ENST00000440127 OR56A1Q8NGH5 318 aa4□□□□□ -1.77
HMGB3P11-201ENST00000440127 SVIPQ8NHG7 77 aa4□□□□□ -1.77
HMGB3P11-201ENST00000440127 TSPEARQ8WU66 669 aa4□□□□□ -1.77
HMGB3P11-201ENST00000440127 LMBR1Q8WVP7 490 aa4□□□□□ -1.77
HMGB3P11-201ENST00000440127 EVI5LQ96CN4 794 aa4□□□□□ -1.77
HMGB3P11-201ENST00000440127 CEP95Q96GE4 821 aa4□□□□□ -1.77
HMGB3P11-201ENST00000440127 KAZALD1Q96I82 304 aa4□□□□□ -1.77
HMGB3P11-201ENST00000440127 MRI1Q9BV20 369 aa4□□□□□ -1.77
HMGB3P11-201ENST00000440127 LSG1Q9H089 658 aaKnown RBP4□□□□□ -1.77
HMGB3P11-201ENST00000440127 BICC1Q9H694 974 aaKnown RBP4□□□□□ -1.77
HMGB3P11-201ENST00000440127 DIAPH3Q9NSV4 1193 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms