RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 IMPG2Q9BZV3 1241 aa25.65■■□□□ 1.7
CPNE1-217ENST00000439669 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.65■■□□□ 1.71e-6■■■■■ 61.4
CPNE1-217ENST00000439669 ARHGEF3Q9NR81 526 aa25.65■■□□□ 1.7
CPNE1-217ENST00000439669 KRBA1A5PL33 1030 aa25.64■■□□□ 1.7
CPNE1-217ENST00000439669 TRIM49BA6NDI0 452 aa25.64■■□□□ 1.7
CPNE1-217ENST00000439669 BIN1O00499 593 aa25.64■■□□□ 1.7
CPNE1-217ENST00000439669 BDNFP23560 247 aa25.64■■□□□ 1.7
CPNE1-217ENST00000439669 AVPR2P30518 371 aa25.64■■□□□ 1.7
CPNE1-217ENST00000439669 CDH8P55286 799 aa25.64■■□□□ 1.7
CPNE1-217ENST00000439669 CYP4F8P98187 520 aa25.64■■□□□ 1.7
CPNE1-217ENST00000439669 FKBP3Q00688 224 aaKnown RBP25.64■■□□□ 1.7
CPNE1-217ENST00000439669 LRRC63Q05C16 580 aa25.64■■□□□ 1.7
CPNE1-217ENST00000439669 GRM2Q14416 872 aa25.64■■□□□ 1.7
CPNE1-217ENST00000439669 MYCBPAPQ8TBZ2 947 aa25.64■■□□□ 1.7
CPNE1-217ENST00000439669 TAF4BQ92750 862 aa25.64■■□□□ 1.7
CPNE1-217ENST00000439669 PCED1BQ96HM7 432 aa25.64■■□□□ 1.7
CPNE1-217ENST00000439669 DPEP3Q9H4B8 488 aa25.64■■□□□ 1.7
CPNE1-217ENST00000439669 IL21Q9HBE4 155 aa25.64■■□□□ 1.7
CPNE1-217ENST00000439669 ZDBF2Q9HCK1 2354 aa25.63■■□□□ 1.69
CPNE1-217ENST00000439669 STK25O00506 426 aa25.63■■□□□ 1.69
CPNE1-217ENST00000439669 ASS1P00966 412 aaKnown RBP25.63■■□□□ 1.69
CPNE1-217ENST00000439669 HMGA1P17096 107 aaKnown RBP25.63■■□□□ 1.69
CPNE1-217ENST00000439669 PTPN1P18031 435 aaKnown RBP25.63■■□□□ 1.69
CPNE1-217ENST00000439669 PPP1R2P41236 205 aa25.63■■□□□ 1.69
CPNE1-217ENST00000439669 VIPR2P41587 438 aa25.63■■□□□ 1.69
CPNE1-217ENST00000439669 MAGEA11P43364 429 aa25.63■■□□□ 1.69
CPNE1-217ENST00000439669 ASTLQ6HA08 431 aaPredicted RBP25.63■■□□□ 1.69
CPNE1-217ENST00000439669 SPOPLQ6IQ16 392 aa25.63■■□□□ 1.69
CPNE1-217ENST00000439669 KLHL10Q6JEL2 608 aa25.63■■□□□ 1.69
CPNE1-217ENST00000439669 TAS1R2Q8TE23 839 aa25.63■■□□□ 1.69
CPNE1-217ENST00000439669 DHTKD1Q96HY7 919 aaPredicted RBP25.63■■□□□ 1.69
CPNE1-217ENST00000439669 SDCBP2Q9H190 292 aa25.63■■□□□ 1.69
CPNE1-217ENST00000439669 TMEM8AQ9HCN3 771 aa25.63■■□□□ 1.69
CPNE1-217ENST00000439669 ZNF318Q5VUA4 2279 aa25.63■■□□□ 1.69
CPNE1-217ENST00000439669 TRIOO75962 3097 aa25.63■■□□□ 1.69
CPNE1-217ENST00000439669 SLC38A8A6NNN8 435 aa25.62■■□□□ 1.69
CPNE1-217ENST00000439669 SLC16A3O15427 465 aaKnown RBP25.62■■□□□ 1.69
CPNE1-217ENST00000439669 CCNE1P24864 410 aa25.62■■□□□ 1.69
CPNE1-217ENST00000439669 PFKPQ01813 784 aa25.62■■□□□ 1.69
CPNE1-217ENST00000439669 DCAF17Q5H9S7 520 aaPredicted RBP25.62■■□□□ 1.69
CPNE1-217ENST00000439669 CWF19L1Q69YN2 538 aaKnown RBP25.62■■□□□ 1.69
CPNE1-217ENST00000439669 VSTM1Q6UX27 236 aa25.62■■□□□ 1.69
CPNE1-217ENST00000439669 B3GALNT2Q8NCR0 500 aa25.62■■□□□ 1.69
CPNE1-217ENST00000439669 TRPV4Q9HBA0 871 aa25.62■■□□□ 1.69
CPNE1-217ENST00000439669 KMT2EQ8IZD2 1858 aa25.62■■□□□ 1.69
CPNE1-217ENST00000439669 CD44P16070 742 aaKnown RBP25.61■■□□□ 1.69
CPNE1-217ENST00000439669 NPR3P17342 541 aa25.61■■□□□ 1.69
CPNE1-217ENST00000439669 ANXA13P27216 316 aa25.61■■□□□ 1.69
CPNE1-217ENST00000439669 GTF2H1P32780 548 aa25.61■■□□□ 1.69
CPNE1-217ENST00000439669 GRIK1P39086 918 aa25.61■■□□□ 1.69
CPNE1-217ENST00000439669 NLRP12P59046 1061 aa25.61■■□□□ 1.69
CPNE1-217ENST00000439669 NOP14P78316 857 aaKnown RBP25.61■■□□□ 1.69
CPNE1-217ENST00000439669 IER5LQ5T953 404 aa25.61■■□□□ 1.69
CPNE1-217ENST00000439669 TCERG1LQ5VWI1 586 aa25.61■■□□□ 1.69
CPNE1-217ENST00000439669 KRT39Q6A163 491 aa25.61■■□□□ 1.69
CPNE1-217ENST00000439669 VITQ6UXI7 678 aa25.61■■□□□ 1.69
CPNE1-217ENST00000439669 ZC3H3Q8IXZ2 948 aaKnown RBP25.61■■□□□ 1.69
CPNE1-217ENST00000439669 CCDC150Q8NCX0 1101 aa25.61■■□□□ 1.69
CPNE1-217ENST00000439669 TASP1Q9H6P5 420 aa25.61■■□□□ 1.69
CPNE1-217ENST00000439669 TBC1D17Q9HA65 648 aa25.61■■□□□ 1.69
CPNE1-217ENST00000439669 UXTQ9UBK9 157 aaPredicted RBP25.61■■□□□ 1.69
CPNE1-217ENST00000439669 STX10O60499 249 aa25.6■■□□□ 1.69
CPNE1-217ENST00000439669 NOL4O94818 638 aa25.6■■□□□ 1.69
CPNE1-217ENST00000439669 MXI1P50539 228 aa25.6■■□□□ 1.69
CPNE1-217ENST00000439669 CLCN5P51795 746 aa25.6■■□□□ 1.69
CPNE1-217ENST00000439669 MORC3Q14149 939 aa25.6■■□□□ 1.69
CPNE1-217ENST00000439669 GPIHBP1Q8IV16 184 aa25.6■■□□□ 1.69
CPNE1-217ENST00000439669 ARID3BQ8IVW6 561 aaPredicted RBP25.6■■□□□ 1.69
CPNE1-217ENST00000439669 TMEM105Q8N8V8 129 aa25.6■■□□□ 1.69
CPNE1-217ENST00000439669 DEPDC1BQ8WUY9 529 aa25.6■■□□□ 1.69
CPNE1-217ENST00000439669 E2F7Q96AV8 911 aa25.6■■□□□ 1.69
CPNE1-217ENST00000439669 TNIP3Q96KP6 325 aa25.6■■□□□ 1.69
CPNE1-217ENST00000439669 TRMT61BQ9BVS5 477 aaKnown RBP25.6■■□□□ 1.69
CPNE1-217ENST00000439669 KCNH6Q9H252 994 aa25.6■■□□□ 1.69
CPNE1-217ENST00000439669 BRD9Q9H8M2 597 aa25.6■■□□□ 1.69
CPNE1-217ENST00000439669 ARIH1Q9Y4X5 557 aaPredicted RBP25.6■■□□□ 1.69
CPNE1-217ENST00000439669 HEPACAM2A8MVW5 462 aa25.59■■□□□ 1.69
CPNE1-217ENST00000439669 DPYSL4O14531 572 aa25.59■■□□□ 1.69
CPNE1-217ENST00000439669 F11P03951 625 aa25.59■■□□□ 1.69
CPNE1-217ENST00000439669 PSMC3P17980 439 aa25.59■■□□□ 1.69
CPNE1-217ENST00000439669 BMP6P22004 513 aa25.59■■□□□ 1.69
CPNE1-217ENST00000439669 ASPAP45381 313 aa25.59■■□□□ 1.69
CPNE1-217ENST00000439669 CAMK4Q16566 473 aa25.59■■□□□ 1.69
CPNE1-217ENST00000439669 NELFBQ8WX92 580 aa25.59■■□□□ 1.69
CPNE1-217ENST00000439669 MRPS31Q92665 395 aaKnown RBP25.59■■□□□ 1.69
CPNE1-217ENST00000439669 ZNF518BQ9C0D4 1074 aa25.59■■□□□ 1.69
CPNE1-217ENST00000439669 ELOVL4Q9GZR5 314 aa25.59■■□□□ 1.69
CPNE1-217ENST00000439669 CTNND2Q9UQB3 1225 aa25.59■■□□□ 1.69
CPNE1-217ENST00000439669 NCANO14594 1321 aa25.59■■□□□ 1.69
CPNE1-217ENST00000439669 CLDN5O00501 218 aa25.58■■□□□ 1.69
CPNE1-217ENST00000439669 TRIM66O15016 1216 aa25.58■■□□□ 1.69
CPNE1-217ENST00000439669 GDI1P31150 447 aa25.58■■□□□ 1.69
CPNE1-217ENST00000439669 MLF2Q15773 248 aaPredicted RBP25.58■■□□□ 1.69
CPNE1-217ENST00000439669 TMEM150AQ86TG1 271 aa25.58■■□□□ 1.69
CPNE1-217ENST00000439669 YAF2Q8IY57 180 aa25.58■■□□□ 1.69
CPNE1-217ENST00000439669 RSPRY1Q96DX4 576 aa25.58■■□□□ 1.69
CPNE1-217ENST00000439669 TRMT2BQ96GJ1 504 aaKnown RBP25.58■■□□□ 1.69
CPNE1-217ENST00000439669 SHDQ96IW2 340 aa25.58■■□□□ 1.69
CPNE1-217ENST00000439669 MED10Q9BTT4 135 aa25.58■■□□□ 1.69
CPNE1-217ENST00000439669 B3GNT5Q9BYG0 378 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms