RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 CMTM8Q8IZV2 173 aa21.76■■□□□ 1.07
NCKIPSD-206ENST00000439518 STKLD1Q8NE28 680 aa21.76■■□□□ 1.07
NCKIPSD-206ENST00000439518 BPIFB1Q8TDL5 484 aa21.76■■□□□ 1.07
NCKIPSD-206ENST00000439518 ZNF516Q92618 1163 aa21.76■■□□□ 1.07
NCKIPSD-206ENST00000439518 CCDC127Q96BQ5 260 aa21.76■■□□□ 1.07
NCKIPSD-206ENST00000439518 MSANTD3Q96H12 275 aa21.76■■□□□ 1.07
NCKIPSD-206ENST00000439518 CHAMP1Q96JM3 812 aa21.76■■□□□ 1.07
NCKIPSD-206ENST00000439518 ZFYVE19Q96K21 471 aa21.76■■□□□ 1.07
NCKIPSD-206ENST00000439518 MYRFLQ96LU7 910 aa21.76■■□□□ 1.07
NCKIPSD-206ENST00000439518 FNBP1Q96RU3 617 aa21.76■■□□□ 1.07
NCKIPSD-206ENST00000439518 CHRDQ9H2X0 955 aa21.76■■□□□ 1.07
NCKIPSD-206ENST00000439518 C8orf33Q9H7E9 229 aaPredicted RBP21.76■■□□□ 1.07
NCKIPSD-206ENST00000439518 HPSEQ9Y251 543 aa21.76■■□□□ 1.07
NCKIPSD-206ENST00000439518 SLC38A8A6NNN8 435 aa21.75■■□□□ 1.07
NCKIPSD-206ENST00000439518 SOBPA7XYQ1 873 aa21.75■■□□□ 1.07
NCKIPSD-206ENST00000439518 PFKFB1P16118 471 aa21.75■■□□□ 1.07
NCKIPSD-206ENST00000439518 TNNI1P19237 187 aa21.75■■□□□ 1.07
NCKIPSD-206ENST00000439518 WARSP23381 471 aaKnown RBP21.75■■□□□ 1.07
NCKIPSD-206ENST00000439518 STK4Q13043 487 aa21.75■■□□□ 1.07
NCKIPSD-206ENST00000439518 SPATA2LQ8IUW3 424 aaPredicted RBP21.75■■□□□ 1.07
NCKIPSD-206ENST00000439518 CELF5Q8N6W0 485 aaKnown RBP21.75■■□□□ 1.07
NCKIPSD-206ENST00000439518 NELL1Q92832 810 aa21.75■■□□□ 1.07
NCKIPSD-206ENST00000439518 TRMT2BQ96GJ1 504 aaKnown RBP21.75■■□□□ 1.07
NCKIPSD-206ENST00000439518 SYT15Q9BQS2 421 aa21.75■■□□□ 1.07
NCKIPSD-206ENST00000439518 SMG9Q9H0W8 520 aaKnown RBP21.75■■□□□ 1.07
NCKIPSD-206ENST00000439518 PRMT8Q9NR22 394 aaPredicted RBP21.75■■□□□ 1.07
NCKIPSD-206ENST00000439518 CDH9Q9ULB4 789 aa21.75■■□□□ 1.07
NCKIPSD-206ENST00000439518 A0A1B0GVL5 298 aa21.74■■□□□ 1.07
NCKIPSD-206ENST00000439518 CHRNB1P11230 501 aa21.74■■□□□ 1.07
NCKIPSD-206ENST00000439518 DDX6P26196 483 aaKnown RBP eCLIP21.74■■□□□ 1.07
NCKIPSD-206ENST00000439518 MAGEA11P43364 429 aa21.74■■□□□ 1.07
NCKIPSD-206ENST00000439518 SOX9P48436 509 aa21.74■■□□□ 1.07
NCKIPSD-206ENST00000439518 PLCB2Q00722 1185 aa21.74■■□□□ 1.07
NCKIPSD-206ENST00000439518 C1orf228Q6PIY5 440 aa21.74■■□□□ 1.07
NCKIPSD-206ENST00000439518 MON1AQ86VX9 555 aa21.74■■□□□ 1.07
NCKIPSD-206ENST00000439518 KIAA0895Q8NCT3 520 aa21.74■■□□□ 1.07
NCKIPSD-206ENST00000439518 GOLGA5Q8TBA6 731 aa21.74■■□□□ 1.07
NCKIPSD-206ENST00000439518 IER2Q9BTL4 223 aa21.74■■□□□ 1.07
NCKIPSD-206ENST00000439518 LMAN1LQ9HAT1 526 aa21.74■■□□□ 1.07
NCKIPSD-206ENST00000439518 CRTAC1Q9NQ79 661 aa21.74■■□□□ 1.07
NCKIPSD-206ENST00000439518 GTSE1Q9NYZ3 720 aa21.74■■□□□ 1.07
NCKIPSD-206ENST00000439518 USP25Q9UHP3 1055 aa21.74■■□□□ 1.07
NCKIPSD-206ENST00000439518 MAGED2Q9UNF1 606 aaPredicted RBP21.74■■□□□ 1.07
NCKIPSD-206ENST00000439518 DENND4CQ5VZ89 1909 aa21.74■■□□□ 1.07
NCKIPSD-206ENST00000439518 SPECC1L-ADORA2AF8WAN1 911 aa21.73■■□□□ 1.07
NCKIPSD-206ENST00000439518 TADA3O75528 432 aa21.73■■□□□ 1.07
NCKIPSD-206ENST00000439518 STAU1O95793 577 aaKnown RBP21.73■■□□□ 1.07
NCKIPSD-206ENST00000439518 FAM163BP0C2L3 166 aa21.73■■□□□ 1.07
NCKIPSD-206ENST00000439518 KPNA1P52294 538 aaPredicted RBP21.73■■□□□ 1.07
NCKIPSD-206ENST00000439518 PSMC1P62191 440 aaKnown RBP21.73■■□□□ 1.07
NCKIPSD-206ENST00000439518 KRT85P78386 507 aa21.73■■□□□ 1.07
NCKIPSD-206ENST00000439518 PSMD2Q13200 908 aa21.73■■□□□ 1.07
NCKIPSD-206ENST00000439518 TXNDC8Q6A555 127 aa21.73■■□□□ 1.07
NCKIPSD-206ENST00000439518 C4orf50Q6ZRC1 276 aa21.73■■□□□ 1.07
NCKIPSD-206ENST00000439518 RALGPS2Q86X27 583 aaPredicted RBP21.73■■□□□ 1.07
NCKIPSD-206ENST00000439518 MAB21L3Q8N8X9 362 aa21.73■■□□□ 1.07
NCKIPSD-206ENST00000439518 ZBTB44Q8NCP5 570 aa21.73■■□□□ 1.07
NCKIPSD-206ENST00000439518 PLEKHO2Q8TD55 490 aa21.73■■□□□ 1.07
NCKIPSD-206ENST00000439518 TMEM174Q8WUU8 243 aa21.73■■□□□ 1.07
NCKIPSD-206ENST00000439518 MRPS31Q92665 395 aaKnown RBP21.73■■□□□ 1.07
NCKIPSD-206ENST00000439518 USP13Q92995 863 aaPredicted RBP21.73■■□□□ 1.07
NCKIPSD-206ENST00000439518 SPATA32Q96LK8 384 aa21.73■■□□□ 1.07
NCKIPSD-206ENST00000439518 MMS19Q96T76 1030 aa21.73■■□□□ 1.07
NCKIPSD-206ENST00000439518 EXOC1Q9NV70 894 aa21.73■■□□□ 1.07
NCKIPSD-206ENST00000439518 DMAC2Q9NW81 257 aa21.73■■□□□ 1.07
NCKIPSD-206ENST00000439518 UXTQ9UBK9 157 aaPredicted RBP21.73■■□□□ 1.07
NCKIPSD-206ENST00000439518 CCL26Q9Y258 94 aa21.73■■□□□ 1.07
NCKIPSD-206ENST00000439518 PCDHGA2Q9Y5H1 932 aa21.73■■□□□ 1.07
NCKIPSD-206ENST00000439518 FAM237AA0A1B0GTK4 181 aa21.72■■□□□ 1.07
NCKIPSD-206ENST00000439518 EXOC3O60645 756 aa21.72■■□□□ 1.07
NCKIPSD-206ENST00000439518 TACC1O75410 805 aa21.72■■□□□ 1.07
NCKIPSD-206ENST00000439518 PDGFRBP09619 1106 aa21.72■■□□□ 1.07
NCKIPSD-206ENST00000439518 CTHP32929 405 aa21.72■■□□□ 1.07
NCKIPSD-206ENST00000439518 AVPR1AP37288 418 aa21.72■■□□□ 1.07
NCKIPSD-206ENST00000439518 TNK2Q07912 1038 aa21.72■■□□□ 1.07
NCKIPSD-206ENST00000439518 MAPRE1Q15691 268 aaKnown RBP21.72■■□□□ 1.07
NCKIPSD-206ENST00000439518 KMT5BQ4FZB7 885 aa21.72■■□□□ 1.07
NCKIPSD-206ENST00000439518 WDR44Q5JSH3 913 aa21.72■■□□□ 1.07
NCKIPSD-206ENST00000439518 TXNDC11Q6PKC3 985 aa21.72■■□□□ 1.07
NCKIPSD-206ENST00000439518 VSTM1Q6UX27 236 aa21.72■■□□□ 1.07
NCKIPSD-206ENST00000439518 SLC9A9Q8IVB4 645 aa21.72■■□□□ 1.07
NCKIPSD-206ENST00000439518 SCN4BQ8IWT1 228 aa21.72■■□□□ 1.07
NCKIPSD-206ENST00000439518 SUMF1Q8NBK3 374 aa21.72■■□□□ 1.07
NCKIPSD-206ENST00000439518 MRPL45Q9BRJ2 306 aaKnown RBP21.72■■□□□ 1.07
NCKIPSD-206ENST00000439518 XYLT2Q9H1B5 865 aa21.72■■□□□ 1.07
NCKIPSD-206ENST00000439518 KCTD10Q9H3F6 313 aa21.72■■□□□ 1.07
NCKIPSD-206ENST00000439518 GKN1Q9NS71 199 aa21.72■■□□□ 1.07
NCKIPSD-206ENST00000439518 TDP1Q9NUW8 608 aa21.72■■□□□ 1.07
NCKIPSD-206ENST00000439518 THG1LQ9NWX6 298 aaKnown RBP21.72■■□□□ 1.07
NCKIPSD-206ENST00000439518 NME7Q9Y5B8 376 aa21.72■■□□□ 1.07
NCKIPSD-206ENST00000439518 KINO60870 393 aaKnown RBP21.71■■□□□ 1.07
NCKIPSD-206ENST00000439518 MYL1P05976 194 aa21.71■■□□□ 1.07
NCKIPSD-206ENST00000439518 TDGF1P13385 188 aa21.71■■□□□ 1.07
NCKIPSD-206ENST00000439518 CLDN10P78369 228 aa21.71■■□□□ 1.07
NCKIPSD-206ENST00000439518 WDR72Q3MJ13 1102 aa21.71■■□□□ 1.07
NCKIPSD-206ENST00000439518 TSSK4Q6SA08 328 aa21.71■■□□□ 1.07
NCKIPSD-206ENST00000439518 TTC8Q8TAM2 541 aa21.71■■□□□ 1.07
NCKIPSD-206ENST00000439518 MYLPFQ96A32 169 aa21.71■■□□□ 1.07
NCKIPSD-206ENST00000439518 SPATA17Q96L03 361 aa21.71■■□□□ 1.07
NCKIPSD-206ENST00000439518 CEP295NLQ96MC4 621 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms