RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 C9orf72Q96LT7 481 aa12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 HES2Q9Y543 173 aa12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 USH1CQ9Y6N9 552 aa12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 MEFVO15553 781 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 MOCS2O96007 188 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 CPB1P15086 417 aa12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 ELF1P32519 619 aa12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 NDST1P52848 882 aa12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 P3H1Q32P28 736 aa12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 ANKRD20A3Q5VUR7 823 aa12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 TAF2Q6P1X5 1199 aa12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 CXCL17Q6UXB2 119 aa12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 ZBTB10Q96DT7 871 aa12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 TRAIPQ9BWF2 469 aa12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 NIFKQ9BYG3 293 aaKnown RBP12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 PRG3Q9Y2Y8 225 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 DOCK2Q92608 1830 aa12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 APOL1O14791 398 aa12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 GPR182O15218 404 aa12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 TRAPPC3O43617 180 aa12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 ITIH2P19823 946 aa12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 SKOR1P84550 965 aa12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 MTM1Q13496 603 aa12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 IQCKQ8N0W5 287 aa12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 SPATA18Q8TC71 538 aa12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 ATP6V1G3Q96LB4 118 aa12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 YIPF3Q9GZM5 350 aa12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 MAF1Q9H063 256 aa12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 TXNRD2Q9NNW7 524 aa12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 CPSF3Q9UKF6 684 aaKnown RBP12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 ITGA11Q9UKX5 1188 aa12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 NRCAMQ92823 1304 aa12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 TROVE2P10155 538 aaKnown RBP eCLIP12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 DUSP28Q4G0W2 176 aa12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 SYCP2LQ5T4T6 812 aa12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 SYDE1Q6ZW31 735 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 CAVIN3Q969G5 261 aa12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 KREMEN1Q96MU8 473 aa12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 RILPQ96NA2 401 aa12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 CCT8L2Q96SF2 557 aa12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 MTG1Q9BT17 334 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 SRCAPQ6ZRS2 3230 aa12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 GOLGB1Q14789 3259 aaKnown RBP12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 PDHA1P08559 390 aa12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 NFICP08651 508 aa12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 ACADSBP45954 432 aa12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 FNTAP49354 379 aa12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 SULT1E1P49888 294 aa12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 SP2Q02086 613 aa12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 DRP2Q13474 957 aa12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 SPRED3Q2MJR0 410 aa12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 SPRYD7Q5W111 196 aa12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 BTBD8Q5XKL5 378 aa12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 RFX8Q6ZV50 586 aa12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 ZSWIM2Q8NEG5 633 aa12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 BARX2Q9UMQ3 279 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 RASA4BC9J798 803 aa12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 H3BRJ5 948 aa12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 RASA4O43374 803 aa12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 PSTPIP1O43586 416 aa12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 KPNA6O60684 536 aa12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 TADA2AO75478 443 aa12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 PPP1R37O75864 691 aa12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 RECQL4O94761 1208 aa12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 GJB6O95452 261 aa12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 PGK1P00558 417 aa12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 FMO1Q01740 532 aa12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 NLRP14Q86W24 1093 aa12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 SPATA2LQ8IUW3 424 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 PCSK9Q8NBP7 692 aaKnown RBP12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 KRT35Q92764 455 aa12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 RBM15Q96T37 977 aaKnown RBP eCLIP12.12□□□□□ -0.472e-6■■■■■ 33.2
TRAPPC9-202ENST00000438773 XPNPEP3Q9NQH7 507 aa12.12□□□□□ -0.47
TRAPPC9-202ENST00000438773 CCDC85CA6NKD9 419 aa12.11□□□□□ -0.47
TRAPPC9-202ENST00000438773 CYB561D2O14569 222 aa12.11□□□□□ -0.47
TRAPPC9-202ENST00000438773 THP07101 528 aa12.11□□□□□ -0.47
TRAPPC9-202ENST00000438773 FAM200BP0CF97 657 aa12.11□□□□□ -0.47
TRAPPC9-202ENST00000438773 GRIK1P39086 918 aa12.11□□□□□ -0.47
TRAPPC9-202ENST00000438773 OR1G1P47890 313 aa12.11□□□□□ -0.47
TRAPPC9-202ENST00000438773 AP1B1Q10567 949 aa12.11□□□□□ -0.47
TRAPPC9-202ENST00000438773 GEN1Q17RS7 908 aa12.11□□□□□ -0.47
TRAPPC9-202ENST00000438773 ANKRD23Q86SG2 305 aa12.11□□□□□ -0.47
TRAPPC9-202ENST00000438773 CNPY4Q8N129 248 aa12.11□□□□□ -0.47
TRAPPC9-202ENST00000438773 PPTC7Q8NI37 304 aa12.11□□□□□ -0.47
TRAPPC9-202ENST00000438773 NTPCRQ9BSD7 190 aaKnown RBP12.11□□□□□ -0.47
TRAPPC9-202ENST00000438773 EPN3Q9H201 632 aa12.11□□□□□ -0.47
TRAPPC9-202ENST00000438773 RSAD1Q9HA92 442 aa12.11□□□□□ -0.47
TRAPPC9-202ENST00000438773 KCNN4O15554 427 aa12.11□□□□□ -0.47
TRAPPC9-202ENST00000438773 SRGAP2BP0DMP2 458 aa12.11□□□□□ -0.47
TRAPPC9-202ENST00000438773 PYGMP11217 842 aa12.11□□□□□ -0.47
TRAPPC9-202ENST00000438773 ZFXP17010 805 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC9-202ENST00000438773 ARL2P36404 184 aa12.11□□□□□ -0.47
TRAPPC9-202ENST00000438773 POLE2P56282 527 aa12.11□□□□□ -0.47
TRAPPC9-202ENST00000438773 CACNB2Q08289 660 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC9-202ENST00000438773 PTGISQ16647 500 aa12.11□□□□□ -0.47
TRAPPC9-202ENST00000438773 HIF1AQ16665 826 aa12.11□□□□□ -0.47
TRAPPC9-202ENST00000438773 ZBTB41Q5SVQ8 909 aa12.11□□□□□ -0.47
TRAPPC9-202ENST00000438773 MTHFD1LQ6UB35 978 aa12.11□□□□□ -0.47
TRAPPC9-202ENST00000438773 MYCBPAPQ8TBZ2 947 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms