RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 VAV2P52735 878 aa10.3□□□□□ -0.76
CUBN-204ENST00000438254 ELAVL2Q12926 359 aaKnown RBP10.3□□□□□ -0.76
CUBN-204ENST00000438254 PTP4A2Q12974 167 aa10.3□□□□□ -0.76
CUBN-204ENST00000438254 SHHQ15465 462 aa10.3□□□□□ -0.76
CUBN-204ENST00000438254 CCDC142Q17RM4 750 aa10.3□□□□□ -0.76
CUBN-204ENST00000438254 SGO2Q562F6 1265 aa10.3□□□□□ -0.76
CUBN-204ENST00000438254 C10orf76Q5T2E6 689 aa10.3□□□□□ -0.76
CUBN-204ENST00000438254 PPP1R26Q5T8A7 1209 aaPredicted RBP10.3□□□□□ -0.76
CUBN-204ENST00000438254 OVOS1Q6IE37 1185 aa10.3□□□□□ -0.76
CUBN-204ENST00000438254 ALKBH5Q6P6C2 394 aaKnown RBP10.3□□□□□ -0.76
CUBN-204ENST00000438254 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.3□□□□□ -0.76
CUBN-204ENST00000438254 TRIM72Q6ZMU5 477 aa10.3□□□□□ -0.76
CUBN-204ENST00000438254 PAQR9Q6ZVX9 377 aa10.3□□□□□ -0.76
CUBN-204ENST00000438254 TAS1R1Q7RTX1 841 aa10.3□□□□□ -0.76
CUBN-204ENST00000438254 ACOT1Q86TX2 421 aa10.3□□□□□ -0.76
CUBN-204ENST00000438254 C12orf29Q8N999 325 aa10.3□□□□□ -0.76
CUBN-204ENST00000438254 COLGALT1Q8NBJ5 622 aa10.3□□□□□ -0.76
CUBN-204ENST00000438254 B3GALNT2Q8NCR0 500 aa10.3□□□□□ -0.76
CUBN-204ENST00000438254 OR10T2Q8NGX3 314 aa10.3□□□□□ -0.76
CUBN-204ENST00000438254 CYFIP2Q96F07 1278 aa10.3□□□□□ -0.76
CUBN-204ENST00000438254 TNIP3Q96KP6 325 aa10.3□□□□□ -0.76
CUBN-204ENST00000438254 ZNF558Q96NG5 402 aa10.3□□□□□ -0.76
CUBN-204ENST00000438254 YME1L1Q96TA2 773 aa10.3□□□□□ -0.76
CUBN-204ENST00000438254 LPIN3Q9BQK8 851 aa10.3□□□□□ -0.76
CUBN-204ENST00000438254 LACRTQ9GZZ8 138 aa10.3□□□□□ -0.76
CUBN-204ENST00000438254 SNX25Q9H3E2 840 aa10.3□□□□□ -0.76
CUBN-204ENST00000438254 DEF6Q9H4E7 631 aa10.3□□□□□ -0.76
CUBN-204ENST00000438254 CYTH4Q9UIA0 394 aa10.3□□□□□ -0.76
CUBN-204ENST00000438254 CDH9Q9ULB4 789 aa10.3□□□□□ -0.76
CUBN-204ENST00000438254 INTUQ9ULD6 942 aa10.3□□□□□ -0.76
CUBN-204ENST00000438254 PCDHA13Q9Y5I0 950 aa10.3□□□□□ -0.76
CUBN-204ENST00000438254 LCHNA4D1U4 455 aa10.29□□□□□ -0.76
CUBN-204ENST00000438254 MED7O43513 233 aa10.29□□□□□ -0.76
CUBN-204ENST00000438254 ATP2C2O75185 946 aa10.29□□□□□ -0.76
CUBN-204ENST00000438254 MICAL2O94851 1124 aa10.29□□□□□ -0.76
CUBN-204ENST00000438254 LSM8O95777 96 aaKnown RBP10.29□□□□□ -0.76
CUBN-204ENST00000438254 PDGFRBP09619 1106 aa10.29□□□□□ -0.76
CUBN-204ENST00000438254 CD19P15391 556 aa10.29□□□□□ -0.76
CUBN-204ENST00000438254 PTPN1P18031 435 aaKnown RBP10.29□□□□□ -0.76
CUBN-204ENST00000438254 ACAT1P24752 427 aaKnown RBP10.29□□□□□ -0.76
CUBN-204ENST00000438254 GPD2P43304 727 aa10.29□□□□□ -0.76
CUBN-204ENST00000438254 RPL34P49207 117 aaKnown RBP10.29□□□□□ -0.76
CUBN-204ENST00000438254 ALDH7A1P49419 539 aaKnown RBP10.29□□□□□ -0.76
CUBN-204ENST00000438254 RGS19P49795 217 aa10.29□□□□□ -0.76
CUBN-204ENST00000438254 KRT83P78385 493 aa10.29□□□□□ -0.76
CUBN-204ENST00000438254 YWHAHQ04917 246 aaPredicted RBP10.29□□□□□ -0.76
CUBN-204ENST00000438254 STILQ15468 1287 aa10.29□□□□□ -0.76
CUBN-204ENST00000438254 INTS6LQ5JSJ4 861 aaKnown RBP10.29□□□□□ -0.76
CUBN-204ENST00000438254 RTP2Q5QGT7 225 aa10.29□□□□□ -0.76
CUBN-204ENST00000438254 CCDC122Q5T0U0 273 aa10.29□□□□□ -0.76
CUBN-204ENST00000438254 ACAD10Q6JQN1 1059 aa10.29□□□□□ -0.76
CUBN-204ENST00000438254 DENND1BQ6P3S1 775 aa10.29□□□□□ -0.76
CUBN-204ENST00000438254 LRRTM3Q86VH5 581 aa10.29□□□□□ -0.76
CUBN-204ENST00000438254 VPS36Q86VN1 386 aa10.29□□□□□ -0.76
CUBN-204ENST00000438254 TTC30AQ86WT1 665 aa10.29□□□□□ -0.76
CUBN-204ENST00000438254 DNAAF5Q86Y56 855 aa10.29□□□□□ -0.76
CUBN-204ENST00000438254 PHF13Q86YI8 300 aaPredicted RBP10.29□□□□□ -0.76
CUBN-204ENST00000438254 FUKQ8N0W3 1084 aa10.29□□□□□ -0.76
CUBN-204ENST00000438254 C17orf53Q8N3J3 647 aaPredicted RBP10.29□□□□□ -0.76
CUBN-204ENST00000438254 PPP1R13BQ96KQ4 1090 aa10.29□□□□□ -0.76
CUBN-204ENST00000438254 HEXIM2Q96MH2 286 aaKnown RBP10.29□□□□□ -0.76
CUBN-204ENST00000438254 TMEM209Q96SK2 561 aa10.29□□□□□ -0.76
CUBN-204ENST00000438254 HNRNPABQ99729 332 aaKnown RBP10.29□□□□□ -0.76
CUBN-204ENST00000438254 SYT15Q9BQS2 421 aa10.29□□□□□ -0.76
CUBN-204ENST00000438254 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.29□□□□□ -0.76
CUBN-204ENST00000438254 PACSIN1Q9BY11 444 aa10.29□□□□□ -0.76
CUBN-204ENST00000438254 ZNF518BQ9C0D4 1074 aa10.29□□□□□ -0.76
CUBN-204ENST00000438254 MTIF3Q9H2K0 278 aaKnown RBP10.29□□□□□ -0.76
CUBN-204ENST00000438254 TMLHEQ9NVH6 421 aa10.29□□□□□ -0.76
CUBN-204ENST00000438254 TSPAN16Q9UKR8 245 aa10.29□□□□□ -0.76
CUBN-204ENST00000438254 TFR2Q9UP52 801 aa10.29□□□□□ -0.76
CUBN-204ENST00000438254 NLRC5Q86WI3 1866 aa10.29□□□□□ -0.76
CUBN-204ENST00000438254 TCRBV5S1A1TA0A578 114 aa10.28□□□□□ -0.76
CUBN-204ENST00000438254 MYBPHLA2RUH7 354 aa10.28□□□□□ -0.76
CUBN-204ENST00000438254 BTNL10A8MVZ5 291 aa10.28□□□□□ -0.76
CUBN-204ENST00000438254 ESPNB1AK53 854 aa10.28□□□□□ -0.76
CUBN-204ENST00000438254 ZNF500O60304 480 aaPredicted RBP10.28□□□□□ -0.76
CUBN-204ENST00000438254 RTN2O75298 545 aa10.28□□□□□ -0.76
CUBN-204ENST00000438254 ARHGEF15O94989 841 aa10.28□□□□□ -0.76
CUBN-204ENST00000438254 SOD2P04179 222 aa10.28□□□□□ -0.76
CUBN-204ENST00000438254 MMP8P22894 467 aa10.28□□□□□ -0.76
CUBN-204ENST00000438254 PCSK1P29120 753 aa10.28□□□□□ -0.76
CUBN-204ENST00000438254 MAGEA1P43355 309 aa10.28□□□□□ -0.76
CUBN-204ENST00000438254 GALCP54803 685 aa10.28□□□□□ -0.76
CUBN-204ENST00000438254 GSCP56915 257 aaPredicted RBP10.28□□□□□ -0.76
CUBN-204ENST00000438254 PSMC1P62191 440 aaKnown RBP10.28□□□□□ -0.76
CUBN-204ENST00000438254 PLCB3Q01970 1234 aa10.28□□□□□ -0.76
CUBN-204ENST00000438254 TCEAL1Q15170 157 aa10.28□□□□□ -0.76
CUBN-204ENST00000438254 SPA17Q15506 151 aa10.28□□□□□ -0.76
CUBN-204ENST00000438254 FAM171A1Q5VUB5 890 aa10.28□□□□□ -0.76
CUBN-204ENST00000438254 FAM109BQ6ICB4 259 aaPredicted RBP10.28□□□□□ -0.76
CUBN-204ENST00000438254 RSPO2Q6UXX9 243 aaPredicted RBP10.28□□□□□ -0.76
CUBN-204ENST00000438254 MON1BQ7L1V2 547 aa10.28□□□□□ -0.76
CUBN-204ENST00000438254 DDX53Q86TM3 631 aaKnown RBP10.28□□□□□ -0.76
CUBN-204ENST00000438254 METTL23Q86XA0 190 aa10.28□□□□□ -0.76
CUBN-204ENST00000438254 GPR65Q8IYL9 337 aa10.28□□□□□ -0.76
CUBN-204ENST00000438254 FIBCD1Q8N539 461 aa10.28□□□□□ -0.76
CUBN-204ENST00000438254 C1orf131Q8NDD1 294 aaKnown RBP10.28□□□□□ -0.76
CUBN-204ENST00000438254 MYCBPAPQ8TBZ2 947 aa10.28□□□□□ -0.76
CUBN-204ENST00000438254 SLC35F5Q8WV83 523 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms