RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 DAZAP1Q96EP5 407 aaKnown RBP4.22□□□□□ -1.73
HMGB1P31-201ENST00000437242 PUS7Q96PZ0 661 aaKnown RBP4.22□□□□□ -1.73
HMGB1P31-201ENST00000437242 MACROD1Q9BQ69 325 aa4.22□□□□□ -1.73
HMGB1P31-201ENST00000437242 TMEM79Q9BSE2 394 aa4.22□□□□□ -1.73
HMGB1P31-201ENST00000437242 WDCPQ9H6R7 721 aa4.22□□□□□ -1.73
HMGB1P31-201ENST00000437242 GLOD4Q9HC38 313 aa4.22□□□□□ -1.73
HMGB1P31-201ENST00000437242 SERTAD3Q9UJW9 196 aa4.22□□□□□ -1.73
HMGB1P31-201ENST00000437242 ZNF580Q9UK33 172 aa4.22□□□□□ -1.73
HMGB1P31-201ENST00000437242 CCNL1Q9UK58 526 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P31-201ENST00000437242 PCDHA3Q9Y5H8 950 aa4.22□□□□□ -1.73
HMGB1P31-201ENST00000437242 WDR17Q8IZU2 1322 aa4.21□□□□□ -1.73
HMGB1P31-201ENST00000437242 SOCS2O14508 198 aa4.21□□□□□ -1.74
HMGB1P31-201ENST00000437242 USP1O94782 785 aa4.21□□□□□ -1.74
HMGB1P31-201ENST00000437242 FESP07332 822 aa4.21□□□□□ -1.74
HMGB1P31-201ENST00000437242 ZNF134P52741 427 aa4.21□□□□□ -1.74
HMGB1P31-201ENST00000437242 ADKP55263 362 aaKnown RBP4.21□□□□□ -1.74
HMGB1P31-201ENST00000437242 TPTEP56180 551 aa4.21□□□□□ -1.74
HMGB1P31-201ENST00000437242 BOP1Q14137 746 aaKnown RBP4.21□□□□□ -1.74
HMGB1P31-201ENST00000437242 DAZAP2Q15038 168 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P31-201ENST00000437242 LRRC41Q15345 812 aa4.21□□□□□ -1.74
HMGB1P31-201ENST00000437242 Q4G0T1 1027 aa4.21□□□□□ -1.74
HMGB1P31-201ENST00000437242 SYDE2Q5VT97 1194 aa4.21□□□□□ -1.74
HMGB1P31-201ENST00000437242 EFCAB2Q5VUJ9 269 aa4.21□□□□□ -1.74
HMGB1P31-201ENST00000437242 PNMA8AQ86V59 439 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P31-201ENST00000437242 SAMD14Q8IZD0 417 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P31-201ENST00000437242 NANOGP1Q8N7R0 232 aa4.21□□□□□ -1.74
HMGB1P31-201ENST00000437242 RP9Q8TA86 221 aaKnown RBP4.21□□□□□ -1.74
HMGB1P31-201ENST00000437242 SLC46A1Q96NT5 459 aa4.21□□□□□ -1.74
HMGB1P31-201ENST00000437242 KRTAP2-2Q9BYT5 123 aa4.21□□□□□ -1.74
HMGB1P31-201ENST00000437242 TTYH3Q9C0H2 523 aa4.21□□□□□ -1.74
HMGB1P31-201ENST00000437242 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P31-201ENST00000437242 HESX1Q9UBX0 185 aa4.21□□□□□ -1.74
HMGB1P31-201ENST00000437242 ABCF2Q9UG63 623 aa4.21□□□□□ -1.74
HMGB1P31-201ENST00000437242 TRHDEQ9UKU6 1024 aa4.21□□□□□ -1.74
HMGB1P31-201ENST00000437242 AFG3L2Q9Y4W6 797 aa4.21□□□□□ -1.74
HMGB1P31-201ENST00000437242 SHTN1A0MZ66 631 aa4.2□□□□□ -1.74
HMGB1P31-201ENST00000437242 E5RJQ4 531 aa4.2□□□□□ -1.74
HMGB1P31-201ENST00000437242 H7C1Q1 480 aa4.2□□□□□ -1.74
HMGB1P31-201ENST00000437242 IGSF3O75054 1194 aa4.2□□□□□ -1.74
HMGB1P31-201ENST00000437242 BCAR3O75815 825 aa4.2□□□□□ -1.74
HMGB1P31-201ENST00000437242 ATXN1LP0C7T5 689 aaKnown RBP4.2□□□□□ -1.74
HMGB1P31-201ENST00000437242 PIM1P11309 404 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P31-201ENST00000437242 PPIFP30405 207 aaKnown RBP4.2□□□□□ -1.74
HMGB1P31-201ENST00000437242 KRTAP10-6P60371 365 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P31-201ENST00000437242 KRT85P78386 507 aa4.2□□□□□ -1.74
HMGB1P31-201ENST00000437242 THEMIS2Q5TEJ8 643 aa4.2□□□□□ -1.74
HMGB1P31-201ENST00000437242 ARHGAP40Q5TG30 622 aa4.2□□□□□ -1.74
HMGB1P31-201ENST00000437242 GIMAP6Q6P9H5 292 aa4.2□□□□□ -1.74
HMGB1P31-201ENST00000437242 PARS2Q7L3T8 475 aaKnown RBP4.2□□□□□ -1.74
HMGB1P31-201ENST00000437242 HEATR3Q7Z4Q2 680 aa4.2□□□□□ -1.74
HMGB1P31-201ENST00000437242 MRPL10Q7Z7H8 261 aaKnown RBP4.2□□□□□ -1.74
HMGB1P31-201ENST00000437242 DDX42Q86XP3 938 aaKnown RBP eCLIP4.2□□□□□ -1.74
HMGB1P31-201ENST00000437242 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.2□□□□□ -1.74
HMGB1P31-201ENST00000437242 PIGOQ8TEQ8 1089 aa4.2□□□□□ -1.74
HMGB1P31-201ENST00000437242 ATG4AQ8WYN0 398 aa4.2□□□□□ -1.74
HMGB1P31-201ENST00000437242 RITA1Q96K30 269 aa4.2□□□□□ -1.74
HMGB1P31-201ENST00000437242 TMX1Q9H3N1 280 aa4.2□□□□□ -1.74
HMGB1P31-201ENST00000437242 EBF3Q9H4W6 596 aa4.2□□□□□ -1.74
HMGB1P31-201ENST00000437242 KLHL13Q9P2N7 655 aa4.2□□□□□ -1.74
HMGB1P31-201ENST00000437242 NISCHQ9Y2I1 1504 aa4.2□□□□□ -1.74
HMGB1P31-201ENST00000437242 FNDC1Q4ZHG4 1894 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P31-201ENST00000437242 POC1B-GALNT4F8VUJ3 575 aa4.19□□□□□ -1.74
HMGB1P31-201ENST00000437242 DTNBO60941 627 aa4.19□□□□□ -1.74
HMGB1P31-201ENST00000437242 PXNP49023 591 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P31-201ENST00000437242 GPSM2P81274 684 aa4.19□□□□□ -1.74
HMGB1P31-201ENST00000437242 SP2Q02086 613 aa4.19□□□□□ -1.74
HMGB1P31-201ENST00000437242 NOGQ13253 232 aa4.19□□□□□ -1.74
HMGB1P31-201ENST00000437242 PCBP2Q15366 365 aaKnown RBP eCLIP4.19□□□□□ -1.74
HMGB1P31-201ENST00000437242 LONRF3Q496Y0 759 aa4.19□□□□□ -1.74
HMGB1P31-201ENST00000437242 FCRL6Q6DN72 434 aa4.19□□□□□ -1.74
HMGB1P31-201ENST00000437242 KIRREL2Q6UWL6 708 aa4.19□□□□□ -1.74
HMGB1P31-201ENST00000437242 ZDHHC17Q8IUH5 632 aa4.19□□□□□ -1.74
HMGB1P31-201ENST00000437242 GALNT4Q8N4A0 578 aa4.19□□□□□ -1.74
HMGB1P31-201ENST00000437242 XAGE5Q8WWM1 108 aa4.19□□□□□ -1.74
HMGB1P31-201ENST00000437242 GLG1Q92896 1179 aa4.19□□□□□ -1.74
HMGB1P31-201ENST00000437242 R3HDM4Q96D70 268 aa4.19□□□□□ -1.74
HMGB1P31-201ENST00000437242 FAM118BQ9BPY3 351 aa4.19□□□□□ -1.74
HMGB1P31-201ENST00000437242 PTDSS2Q9BVG9 487 aa4.19□□□□□ -1.74
HMGB1P31-201ENST00000437242 MRPL46Q9H2W6 279 aaKnown RBP4.19□□□□□ -1.74
HMGB1P31-201ENST00000437242 A1L4Q6 167 aa4.18□□□□□ -1.74
HMGB1P31-201ENST00000437242 UBE2Q2LH0YL09 131 aa4.18□□□□□ -1.74
HMGB1P31-201ENST00000437242 FZD9O00144 591 aa4.18□□□□□ -1.74
HMGB1P31-201ENST00000437242 SLC16A6O15403 523 aa4.18□□□□□ -1.74
HMGB1P31-201ENST00000437242 EXOC3O60645 756 aa4.18□□□□□ -1.74
HMGB1P31-201ENST00000437242 FGBP02675 491 aa4.18□□□□□ -1.74
HMGB1P31-201ENST00000437242 CHRM5P08912 532 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P31-201ENST00000437242 SCP2P22307 547 aa4.18□□□□□ -1.74
HMGB1P31-201ENST00000437242 LILRA4P59901 499 aa4.18□□□□□ -1.74
HMGB1P31-201ENST00000437242 IQCB1Q15051 598 aa4.18□□□□□ -1.74
HMGB1P31-201ENST00000437242 TBC1D25Q3MII6 688 aa4.18□□□□□ -1.74
HMGB1P31-201ENST00000437242 RGS7BPQ6MZT1 257 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P31-201ENST00000437242 SHC4Q6S5L8 630 aa4.18□□□□□ -1.74
HMGB1P31-201ENST00000437242 SERPINA13PQ6UXR4 307 aa4.18□□□□□ -1.74
HMGB1P31-201ENST00000437242 Q6ZWC4 215 aa4.18□□□□□ -1.74
HMGB1P31-201ENST00000437242 MIER2Q8N344 545 aa4.18□□□□□ -1.74
HMGB1P31-201ENST00000437242 NRACQ8N912 160 aa4.18□□□□□ -1.74
HMGB1P31-201ENST00000437242 ABHD11Q8NFV4 315 aa4.18□□□□□ -1.74
HMGB1P31-201ENST00000437242 MTMR8Q96EF0 704 aa4.18□□□□□ -1.74
HMGB1P31-201ENST00000437242 SSX2IPQ9Y2D8 614 aa4.18□□□□□ -1.74
HMGB1P31-201ENST00000437242 IGKV2D-30A0A075B6S6 120 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms