RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 TC2NQ8N9U0 490 aa11.72□□□□□ -0.53
HMGCL-204ENST00000436439 PJA1Q8NG27 643 aa11.72□□□□□ -0.53
HMGCL-204ENST00000436439 ACAP3Q96P50 834 aa11.72□□□□□ -0.53
HMGCL-204ENST00000436439 PANX2Q96RD6 677 aa11.72□□□□□ -0.53
HMGCL-204ENST00000436439 FNBP1Q96RU3 617 aa11.72□□□□□ -0.53
HMGCL-204ENST00000436439 CGRRF1Q99675 332 aa11.72□□□□□ -0.53
HMGCL-204ENST00000436439 KXD1Q9BQD3 176 aa11.72□□□□□ -0.53
HMGCL-204ENST00000436439 PLA2G2FQ9BZM2 168 aa11.72□□□□□ -0.53
HMGCL-204ENST00000436439 ASB7Q9H672 318 aa11.72□□□□□ -0.53
HMGCL-204ENST00000436439 GCNT4Q9P109 453 aa11.72□□□□□ -0.53
HMGCL-204ENST00000436439 SIT1Q9Y3P8 196 aa11.72□□□□□ -0.53
HMGCL-204ENST00000436439 TSC2P49815 1807 aa11.72□□□□□ -0.53
HMGCL-204ENST00000436439 TICRRQ7Z2Z1 1910 aa11.72□□□□□ -0.53
HMGCL-204ENST00000436439 TTC26A0AVF1 554 aa11.71□□□□□ -0.53
HMGCL-204ENST00000436439 CCP110O43303 1012 aa11.71□□□□□ -0.53
HMGCL-204ENST00000436439 MFAP3LO75121 409 aa11.71□□□□□ -0.53
HMGCL-204ENST00000436439 NOL4O94818 638 aa11.71□□□□□ -0.53
HMGCL-204ENST00000436439 SEC24AO95486 1093 aa11.71□□□□□ -0.53
HMGCL-204ENST00000436439 RHOP08100 348 aa11.71□□□□□ -0.53
HMGCL-204ENST00000436439 FECHP22830 423 aa11.71□□□□□ -0.53
HMGCL-204ENST00000436439 CASP14P31944 242 aa11.71□□□□□ -0.53
HMGCL-204ENST00000436439 KLK7P49862 253 aa11.71□□□□□ -0.53
HMGCL-204ENST00000436439 MXI1P50539 228 aa11.71□□□□□ -0.53
HMGCL-204ENST00000436439 ARPP19P56211 112 aa11.71□□□□□ -0.53
HMGCL-204ENST00000436439 ZBED6P86452 979 aa11.71□□□□□ -0.53
HMGCL-204ENST00000436439 MRPL58Q14197 206 aaKnown RBP11.71□□□□□ -0.53
HMGCL-204ENST00000436439 ENOX2Q16206 610 aaKnown RBP11.71□□□□□ -0.53
HMGCL-204ENST00000436439 ZACNQ401N2 412 aa11.71□□□□□ -0.53
HMGCL-204ENST00000436439 TRIM65Q6PJ69 517 aa11.71□□□□□ -0.53
HMGCL-204ENST00000436439 MTSS1LQ765P7 747 aa11.71□□□□□ -0.53
HMGCL-204ENST00000436439 NT5DC4Q86YG4 428 aa11.71□□□□□ -0.53
HMGCL-204ENST00000436439 CD302Q8IX05 232 aa11.71□□□□□ -0.53
HMGCL-204ENST00000436439 NEK11Q8NG66 645 aa11.71□□□□□ -0.53
HMGCL-204ENST00000436439 ZNF461Q8TAF7 563 aa11.71□□□□□ -0.53
HMGCL-204ENST00000436439 LMO3Q8TAP4 145 aa11.71□□□□□ -0.53
HMGCL-204ENST00000436439 CCDC127Q96BQ5 260 aa11.71□□□□□ -0.53
HMGCL-204ENST00000436439 MCRS1Q96EZ8 462 aa11.71□□□□□ -0.53
HMGCL-204ENST00000436439 MMRN2Q9H8L6 949 aa11.71□□□□□ -0.53
HMGCL-204ENST00000436439 RPF1Q9H9Y2 349 aaKnown RBP11.71□□□□□ -0.53
HMGCL-204ENST00000436439 PLEKHA5Q9HAU0 1116 aa11.71□□□□□ -0.53
HMGCL-204ENST00000436439 PDE11AQ9HCR9 933 aa11.71□□□□□ -0.53
HMGCL-204ENST00000436439 SLC38A7Q9NVC3 462 aa11.71□□□□□ -0.53
HMGCL-204ENST00000436439 CEP72Q9P209 647 aa11.71□□□□□ -0.53
HMGCL-204ENST00000436439 TUBGCP4Q9UGJ1 667 aa11.71□□□□□ -0.53
HMGCL-204ENST00000436439 LUC7L2Q9Y383 392 aaKnown RBP11.71□□□□□ -0.53
HMGCL-204ENST00000436439 MTF2Q9Y483 593 aaPredicted RBP11.71□□□□□ -0.53
HMGCL-204ENST00000436439 R4GN57 208 aa11.71□□□□□ -0.53
HMGCL-204ENST00000436439 ARHGEF37A1IGU5 675 aa11.7□□□□□ -0.54
HMGCL-204ENST00000436439 KIF2AO00139 706 aaPredicted RBP11.7□□□□□ -0.54
HMGCL-204ENST00000436439 C4BPAP04003 597 aaKnown RBP11.7□□□□□ -0.54
HMGCL-204ENST00000436439 CXCL8P10145 99 aa11.7□□□□□ -0.54
HMGCL-204ENST00000436439 DLATP10515 647 aaKnown RBP11.7□□□□□ -0.54
HMGCL-204ENST00000436439 ATF2P15336 505 aa11.7□□□□□ -0.54
HMGCL-204ENST00000436439 CEBPBP17676 345 aa11.7□□□□□ -0.54
HMGCL-204ENST00000436439 SLC9A1P19634 815 aa11.7□□□□□ -0.54
HMGCL-204ENST00000436439 CD72P21854 359 aa11.7□□□□□ -0.54
HMGCL-204ENST00000436439 HNRNPH3P31942 346 aaKnown RBP11.7□□□□□ -0.54
HMGCL-204ENST00000436439 CCR2P41597 374 aa11.7□□□□□ -0.54
HMGCL-204ENST00000436439 GCLMP48507 274 aa11.7□□□□□ -0.54
HMGCL-204ENST00000436439 WNT7BP56706 349 aa11.7□□□□□ -0.54
HMGCL-204ENST00000436439 MLF2Q15773 248 aaPredicted RBP11.7□□□□□ -0.54
HMGCL-204ENST00000436439 KLHDC7AQ5VTJ3 777 aa11.7□□□□□ -0.54
HMGCL-204ENST00000436439 SV2AQ7L0J3 742 aa11.7□□□□□ -0.54
HMGCL-204ENST00000436439 RTL10Q7L3V2 364 aa11.7□□□□□ -0.54
HMGCL-204ENST00000436439 MAML2Q8IZL2 1156 aaPredicted RBP11.7□□□□□ -0.54
HMGCL-204ENST00000436439 EHBP1Q8NDI1 1231 aa11.7□□□□□ -0.54
HMGCL-204ENST00000436439 FBXL13Q8NEE6 735 aa11.7□□□□□ -0.54
HMGCL-204ENST00000436439 ZNF397Q8NF99 534 aaPredicted RBP11.7□□□□□ -0.54
HMGCL-204ENST00000436439 ZNF516Q92618 1163 aa11.7□□□□□ -0.54
HMGCL-204ENST00000436439 TCEAL4Q96EI5 215 aa11.7□□□□□ -0.54
HMGCL-204ENST00000436439 SUSD3Q96L08 255 aa11.7□□□□□ -0.54
HMGCL-204ENST00000436439 PCMTD1Q96MG8 357 aaPredicted RBP11.7□□□□□ -0.54
HMGCL-204ENST00000436439 TSPAN18Q96SJ8 248 aa11.7□□□□□ -0.54
HMGCL-204ENST00000436439 DNAJC7Q99615 494 aa11.7□□□□□ -0.54
HMGCL-204ENST00000436439 DDX23Q9BUQ8 820 aaKnown RBP11.7□□□□□ -0.54
HMGCL-204ENST00000436439 NAA15Q9BXJ9 866 aaKnown RBP11.7□□□□□ -0.54
HMGCL-204ENST00000436439 NUCKS1Q9H1E3 243 aaKnown RBP11.7□□□□□ -0.54
HMGCL-204ENST00000436439 GANQ9H2C0 597 aa11.7□□□□□ -0.54
HMGCL-204ENST00000436439 SIX2Q9NPC8 291 aa11.7□□□□□ -0.54
HMGCL-204ENST00000436439 FAM207AQ9NSI2 230 aaPredicted RBP11.7□□□□□ -0.54
HMGCL-204ENST00000436439 MYO6Q9UM54 1294 aa11.7□□□□□ -0.54
HMGCL-204ENST00000436439 MRPS23Q9Y3D9 190 aaKnown RBP11.7□□□□□ -0.54
HMGCL-204ENST00000436439 NUB1Q9Y5A7 615 aa11.7□□□□□ -0.54
HMGCL-204ENST00000436439 CACNA1IQ9P0X4 2223 aa11.7□□□□□ -0.54
HMGCL-204ENST00000436439 DCHS1Q96JQ0 3298 aa11.7□□□□□ -0.54
HMGCL-204ENST00000436439 KANSL1LA0AUZ9 987 aa11.69□□□□□ -0.54
HMGCL-204ENST00000436439 RNF225M0QZC1 329 aaPredicted RBP11.69□□□□□ -0.54
HMGCL-204ENST00000436439 SYN3O14994 580 aa11.69□□□□□ -0.54
HMGCL-204ENST00000436439 EPHB6O15197 1021 aa11.69□□□□□ -0.54
HMGCL-204ENST00000436439 LRG1P02750 347 aa11.69□□□□□ -0.54
HMGCL-204ENST00000436439 TUBB4AP04350 444 aa11.69□□□□□ -0.54
HMGCL-204ENST00000436439 UCHL3P15374 230 aa11.69□□□□□ -0.54
HMGCL-204ENST00000436439 PTPN2P17706 415 aa11.69□□□□□ -0.54
HMGCL-204ENST00000436439 TNNI1P19237 187 aa11.69□□□□□ -0.54
HMGCL-204ENST00000436439 RPL9P32969 192 aaKnown RBP11.69□□□□□ -0.54
HMGCL-204ENST00000436439 KRT9P35527 623 aa11.69□□□□□ -0.54
HMGCL-204ENST00000436439 ADKP55263 362 aaKnown RBP11.69□□□□□ -0.54
HMGCL-204ENST00000436439 SLC44A4Q53GD3 710 aa11.69□□□□□ -0.54
HMGCL-204ENST00000436439 PRSS36Q5K4E3 855 aa11.69□□□□□ -0.54
HMGCL-204ENST00000436439 SMYD5Q6GMV2 418 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms