RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 ARHGAP25P42331 645 aa24.37■■□□□ 1.49
CPSF4-204ENST00000436336 CTXN3Q4LDR2 81 aa24.37■■□□□ 1.49
CPSF4-204ENST00000436336 PKDCCQ504Y2 493 aa24.37■■□□□ 1.49
CPSF4-204ENST00000436336 RTP2Q5QGT7 225 aa24.37■■□□□ 1.49
CPSF4-204ENST00000436336 TAS1R1Q7RTX1 841 aa24.37■■□□□ 1.49
CPSF4-204ENST00000436336 FUKQ8N0W3 1084 aa24.37■■□□□ 1.49
CPSF4-204ENST00000436336 ANKRD52Q8NB46 1076 aa24.37■■□□□ 1.49
CPSF4-204ENST00000436336 CTNNBL1Q8WYA6 563 aaPredicted RBP24.37■■□□□ 1.49
CPSF4-204ENST00000436336 B3GALT6Q96L58 329 aa24.37■■□□□ 1.49
CPSF4-204ENST00000436336 PKMYT1Q99640 499 aa24.37■■□□□ 1.49
CPSF4-204ENST00000436336 STK39Q9UEW8 545 aa24.37■■□□□ 1.49
CPSF4-204ENST00000436336 OR6C75A6NL08 312 aa24.36■■□□□ 1.49
CPSF4-204ENST00000436336 SETSIPP0DME0 302 aa24.36■■□□□ 1.49
CPSF4-204ENST00000436336 PLCB3Q01970 1234 aa24.36■■□□□ 1.49
CPSF4-204ENST00000436336 DDX53Q86TM3 631 aaKnown RBP24.36■■□□□ 1.49
CPSF4-204ENST00000436336 TTC30AQ86WT1 665 aa24.36■■□□□ 1.49
CPSF4-204ENST00000436336 UBA3Q8TBC4 463 aa24.36■■□□□ 1.49
CPSF4-204ENST00000436336 TRIM11Q96F44 468 aa24.36■■□□□ 1.49
CPSF4-204ENST00000436336 PCED1BQ96HM7 432 aa24.36■■□□□ 1.49
CPSF4-204ENST00000436336 VCPIP1Q96JH7 1222 aa24.36■■□□□ 1.49
CPSF4-204ENST00000436336 GDF15Q99988 308 aa24.36■■□□□ 1.49
CPSF4-204ENST00000436336 HERC2P3Q9BVR0 1158 aa24.36■■□□□ 1.49
CPSF4-204ENST00000436336 ZCWPW1Q9H0M4 648 aa24.36■■□□□ 1.49
CPSF4-204ENST00000436336 CHST7Q9NS84 486 aa24.36■■□□□ 1.49
CPSF4-204ENST00000436336 LCHNA4D1U4 455 aa24.35■■□□□ 1.49
CPSF4-204ENST00000436336 ZNF500O60304 480 aaPredicted RBP24.35■■□□□ 1.49
CPSF4-204ENST00000436336 ABCB4P21439 1286 aa24.35■■□□□ 1.49
CPSF4-204ENST00000436336 BCAT1P54687 386 aa24.35■■□□□ 1.49
CPSF4-204ENST00000436336 CCDC142Q17RM4 750 aa24.35■■□□□ 1.49
CPSF4-204ENST00000436336 PAQR9Q6ZVX9 377 aa24.35■■□□□ 1.49
CPSF4-204ENST00000436336 MON1BQ7L1V2 547 aa24.35■■□□□ 1.49
CPSF4-204ENST00000436336 DCP1BQ8IZD4 617 aaKnown RBP24.35■■□□□ 1.49
CPSF4-204ENST00000436336 MCOLN2Q8IZK6 566 aa24.35■■□□□ 1.49
CPSF4-204ENST00000436336 SECISBP2LQ93073 1101 aaKnown RBP24.35■■□□□ 1.49
CPSF4-204ENST00000436336 NOX5Q96PH1 765 aa24.35■■□□□ 1.49
CPSF4-204ENST00000436336 TMEM209Q96SK2 561 aa24.35■■□□□ 1.49
CPSF4-204ENST00000436336 MED10Q9BTT4 135 aa24.35■■□□□ 1.49
CPSF4-204ENST00000436336 B3GNT5Q9BYG0 378 aa24.35■■□□□ 1.49
CPSF4-204ENST00000436336 UBE2OQ9C0C9 1292 aaKnown RBP24.35■■□□□ 1.49
CPSF4-204ENST00000436336 RWDD3Q9Y3V2 267 aa24.35■■□□□ 1.49
CPSF4-204ENST00000436336 FAM170AA1A519 330 aa24.35■■□□□ 1.49
CPSF4-204ENST00000436336 BTNL10A8MVZ5 291 aa24.35■■□□□ 1.49
CPSF4-204ENST00000436336 CAPN15O75808 1086 aa24.35■■□□□ 1.49
CPSF4-204ENST00000436336 MMP8P22894 467 aa24.35■■□□□ 1.49
CPSF4-204ENST00000436336 GPC5P78333 572 aa24.35■■□□□ 1.49
CPSF4-204ENST00000436336 C1QBPQ07021 282 aaKnown RBP24.35■■□□□ 1.49
CPSF4-204ENST00000436336 BST2Q10589 180 aaKnown RBP24.35■■□□□ 1.49
CPSF4-204ENST00000436336 MYLPFQ96A32 169 aa24.35■■□□□ 1.49
CPSF4-204ENST00000436336 THAP2Q9H0W7 228 aa24.35■■□□□ 1.49
CPSF4-204ENST00000436336 ADAM22Q9P0K1 906 aa24.35■■□□□ 1.49
CPSF4-204ENST00000436336 TBC1D4O60343 1298 aa24.34■■□□□ 1.49
CPSF4-204ENST00000436336 ABL1P00519 1130 aa24.34■■□□□ 1.49
CPSF4-204ENST00000436336 MYBL1P10243 752 aa24.34■■□□□ 1.49
CPSF4-204ENST00000436336 KRT17Q04695 432 aa24.34■■□□□ 1.49
CPSF4-204ENST00000436336 KIAA1841Q6NSI8 718 aa24.34■■□□□ 1.49
CPSF4-204ENST00000436336 LRRTM3Q86VH5 581 aa24.34■■□□□ 1.49
CPSF4-204ENST00000436336 ERICH1Q86X53 443 aa24.34■■□□□ 1.49
CPSF4-204ENST00000436336 MSANTD4Q8NCY6 345 aa24.34■■□□□ 1.49
CPSF4-204ENST00000436336 PIK3R5Q8WYR1 880 aa24.34■■□□□ 1.49
CPSF4-204ENST00000436336 DUSP16Q9BY84 665 aa24.34■■□□□ 1.49
CPSF4-204ENST00000436336 TRIM10Q9UDY6 481 aa24.34■■□□□ 1.49
CPSF4-204ENST00000436336 CYTH4Q9UIA0 394 aa24.34■■□□□ 1.49
CPSF4-204ENST00000436336 CLDN5O00501 218 aa24.33■■□□□ 1.49
CPSF4-204ENST00000436336 FGF18O76093 207 aa24.33■■□□□ 1.49
CPSF4-204ENST00000436336 CALB1P05937 261 aa24.33■■□□□ 1.49
CPSF4-204ENST00000436336 RABGGTBP53611 331 aa24.33■■□□□ 1.49
CPSF4-204ENST00000436336 SLC8A3P57103 927 aa24.33■■□□□ 1.49
CPSF4-204ENST00000436336 PDE4CQ08493 712 aa24.33■■□□□ 1.49
CPSF4-204ENST00000436336 C4orf50Q6ZRC1 276 aa24.33■■□□□ 1.49
CPSF4-204ENST00000436336 FAM35AQ86V20 835 aa24.33■■□□□ 1.49
CPSF4-204ENST00000436336 SLC35F5Q8WV83 523 aa24.33■■□□□ 1.49
CPSF4-204ENST00000436336 ZNF653Q96CK0 615 aa24.33■■□□□ 1.49
CPSF4-204ENST00000436336 C11orf70Q9BRQ4 267 aa24.33■■□□□ 1.49
CPSF4-204ENST00000436336 TMLHEQ9NVH6 421 aa24.33■■□□□ 1.49
CPSF4-204ENST00000436336 GUCA1BQ9UMX6 200 aa24.33■■□□□ 1.49
CPSF4-204ENST00000436336 DUSP10Q9Y6W6 482 aa24.33■■□□□ 1.49
CPSF4-204ENST00000436336 PATJQ8NI35 1801 aa24.33■■□□□ 1.49
CPSF4-204ENST00000436336 A0A0A6YYK5 440 aaPredicted RBP24.32■■□□□ 1.48
CPSF4-204ENST00000436336 LINC01553A4QN01 128 aa24.32■■□□□ 1.48
CPSF4-204ENST00000436336 FAM200BP0CF97 657 aa24.32■■□□□ 1.48
CPSF4-204ENST00000436336 GLUD2P49448 558 aa24.32■■□□□ 1.48
CPSF4-204ENST00000436336 DSG1Q02413 1049 aa24.32■■□□□ 1.48
CPSF4-204ENST00000436336 PTP4A2Q12974 167 aa24.32■■□□□ 1.48
CPSF4-204ENST00000436336 PDCLQ13371 301 aa24.32■■□□□ 1.48
CPSF4-204ENST00000436336 NFE2Q16621 373 aaPredicted RBP24.32■■□□□ 1.48
CPSF4-204ENST00000436336 MMS22LQ6ZRQ5 1243 aa24.32■■□□□ 1.48
CPSF4-204ENST00000436336 STK32AQ8WU08 396 aa24.32■■□□□ 1.48
CPSF4-204ENST00000436336 RIN2Q8WYP3 895 aaPredicted RBP24.32■■□□□ 1.48
CPSF4-204ENST00000436336 MTRRQ9UBK8 725 aa24.32■■□□□ 1.48
CPSF4-204ENST00000436336 BACE2Q9Y5Z0 518 aa24.32■■□□□ 1.48
CPSF4-204ENST00000436336 NCANO14594 1321 aa24.32■■□□□ 1.48
CPSF4-204ENST00000436336 NPR3P17342 541 aa24.32■■□□□ 1.48
CPSF4-204ENST00000436336 BMPR1AP36894 532 aa24.32■■□□□ 1.48
CPSF4-204ENST00000436336 PSMD5Q16401 504 aa24.32■■□□□ 1.48
CPSF4-204ENST00000436336 PTPN20Q4JDL3 420 aa24.32■■□□□ 1.48
CPSF4-204ENST00000436336 SLC39A12Q504Y0 691 aa24.32■■□□□ 1.48
CPSF4-204ENST00000436336 LIN9Q5TKA1 542 aa24.32■■□□□ 1.48
CPSF4-204ENST00000436336 PRSS55Q6UWB4 352 aaPredicted RBP24.32■■□□□ 1.48
CPSF4-204ENST00000436336 SMARCD1Q96GM5 515 aa24.32■■□□□ 1.48
CPSF4-204ENST00000436336 PLVAPQ9BX97 442 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms