RNA–Protein interactions for RNA: ENST00000436040.6

APTX-208, Transcript of aprataxin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene APTX, Length 2,168 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-208ENST00000436040 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.39□□□□□ -0.43
APTX-208ENST00000436040 UNC80Q8N2C7 3258 aa12.38□□□□□ -0.43
APTX-208ENST00000436040 BICDL2A1A5D9 508 aa12.38□□□□□ -0.43
APTX-208ENST00000436040 SYN3O14994 580 aa12.38□□□□□ -0.43
APTX-208ENST00000436040 TNNC2P02585 160 aa12.38□□□□□ -0.43
APTX-208ENST00000436040 CA8P35219 290 aa12.38□□□□□ -0.43
APTX-208ENST00000436040 PAFAH1B1P43034 410 aa12.38□□□□□ -0.43
APTX-208ENST00000436040 VAV2P52735 878 aa12.38□□□□□ -0.43
APTX-208ENST00000436040 CLDN10P78369 228 aa12.38□□□□□ -0.43
APTX-208ENST00000436040 ENPEPQ07075 957 aa12.38□□□□□ -0.43
APTX-208ENST00000436040 PPP3CAQ08209 521 aa12.38□□□□□ -0.43
APTX-208ENST00000436040 DUOXA2Q1HG44 320 aa12.38□□□□□ -0.43
APTX-208ENST00000436040 FIGNQ5HY92 759 aa12.38□□□□□ -0.43
APTX-208ENST00000436040 RTP2Q5QGT7 225 aa12.38□□□□□ -0.43
APTX-208ENST00000436040 EMC10Q5UCC4 262 aa12.38□□□□□ -0.43
APTX-208ENST00000436040 WDR59Q6PJI9 974 aa12.38□□□□□ -0.43
APTX-208ENST00000436040 FAM114A1Q8IWE2 563 aa12.38□□□□□ -0.43
APTX-208ENST00000436040 EFHBQ8N7U6 833 aa12.38□□□□□ -0.43
APTX-208ENST00000436040 C1orf131Q8NDD1 294 aaKnown RBP12.38□□□□□ -0.43
APTX-208ENST00000436040 CXorf38Q8TB03 319 aa12.38□□□□□ -0.43
APTX-208ENST00000436040 TMC2Q8TDI7 906 aa12.38□□□□□ -0.43
APTX-208ENST00000436040 PARD3BQ8TEW8 1205 aa12.38□□□□□ -0.43
APTX-208ENST00000436040 PIK3R5Q8WYR1 880 aa12.38□□□□□ -0.43
APTX-208ENST00000436040 B3GALT6Q96L58 329 aa12.38□□□□□ -0.43
APTX-208ENST00000436040 ZNF560Q96MR9 790 aa12.38□□□□□ -0.43
APTX-208ENST00000436040 GDAP1L1Q96MZ0 367 aa12.38□□□□□ -0.43
APTX-208ENST00000436040 ALS2CR12Q96Q35 445 aa12.38□□□□□ -0.43
APTX-208ENST00000436040 MKNK1Q9BUB5 465 aa12.38□□□□□ -0.43
APTX-208ENST00000436040 EMILIN2Q9BXX0 1053 aa12.38□□□□□ -0.43
APTX-208ENST00000436040 NHEJ1Q9H9Q4 299 aaPredicted RBP12.38□□□□□ -0.43
APTX-208ENST00000436040 FNIP2Q9P278 1114 aa12.38□□□□□ -0.43
APTX-208ENST00000436040 RNF14Q9UBS8 474 aa12.38□□□□□ -0.43
APTX-208ENST00000436040 C5orf42Q9H799 3197 aa12.38□□□□□ -0.43
APTX-208ENST00000436040 SPTBN5Q9NRC6 3674 aaKnown RBP12.38□□□□□ -0.43
APTX-208ENST00000436040 A0A1W2PQJ5 194 aa12.37□□□□□ -0.43
APTX-208ENST00000436040 I3L4J1 428 aa12.37□□□□□ -0.43
APTX-208ENST00000436040 M0QZQ0 153 aa12.37□□□□□ -0.43
APTX-208ENST00000436040 ZMYND10O75800 440 aa12.37□□□□□ -0.43
APTX-208ENST00000436040 MYBL2P10244 700 aa12.37□□□□□ -0.43
APTX-208ENST00000436040 TRIM21P19474 475 aaKnown RBP12.37□□□□□ -0.43
APTX-208ENST00000436040 RDXP35241 583 aaKnown RBP12.37□□□□□ -0.43
APTX-208ENST00000436040 PSMC2P35998 433 aaKnown RBP12.37□□□□□ -0.43
APTX-208ENST00000436040 LILRA4P59901 499 aa12.37□□□□□ -0.43
APTX-208ENST00000436040 SKIV2LQ15477 1246 aaKnown RBP12.37□□□□□ -0.43
APTX-208ENST00000436040 CTC1Q2NKJ3 1217 aa12.37□□□□□ -0.43
APTX-208ENST00000436040 DCAF17Q5H9S7 520 aaPredicted RBP12.37□□□□□ -0.43
APTX-208ENST00000436040 RBM23Q86U06 439 aaKnown RBP12.37□□□□□ -0.43
APTX-208ENST00000436040 PABPC5Q96DU9 382 aaKnown RBP12.37□□□□□ -0.43
APTX-208ENST00000436040 STIM2Q9P246 746 aa12.37□□□□□ -0.43
APTX-208ENST00000436040 PCDHB8Q9UN66 801 aa12.37□□□□□ -0.43
APTX-208ENST00000436040 CAPN7Q9Y6W3 813 aa12.37□□□□□ -0.43
APTX-208ENST00000436040 PLXNA3P51805 1871 aa12.37□□□□□ -0.43
APTX-208ENST00000436040 C2CD2LO14523 706 aa12.37□□□□□ -0.43
APTX-208ENST00000436040 PER2O15055 1255 aa12.37□□□□□ -0.43
APTX-208ENST00000436040 CLASP2O75122 1294 aaKnown RBP12.37□□□□□ -0.43
APTX-208ENST00000436040 CST3P01034 146 aaPredicted RBP12.37□□□□□ -0.43
APTX-208ENST00000436040 ITGB3P05106 788 aa12.37□□□□□ -0.43
APTX-208ENST00000436040 CNPP09543 421 aaKnown RBP12.37□□□□□ -0.43
APTX-208ENST00000436040 TNNI1P19237 187 aa12.37□□□□□ -0.43
APTX-208ENST00000436040 TKTP29401 623 aaKnown RBP12.37□□□□□ -0.43
APTX-208ENST00000436040 POLR2BP30876 1174 aaKnown RBP12.37□□□□□ -0.43
APTX-208ENST00000436040 PNPLA4P41247 253 aa12.37□□□□□ -0.43
APTX-208ENST00000436040 GCLMP48507 274 aa12.37□□□□□ -0.43
APTX-208ENST00000436040 TAF6P49848 677 aa12.37□□□□□ -0.43
APTX-208ENST00000436040 AP3M2P53677 418 aa12.37□□□□□ -0.43
APTX-208ENST00000436040 MCCD1P59942 119 aaPredicted RBP12.37□□□□□ -0.43
APTX-208ENST00000436040 C2orf54Q08AI8 447 aa12.37□□□□□ -0.43
APTX-208ENST00000436040 ADAM15Q13444 863 aa12.37□□□□□ -0.43
APTX-208ENST00000436040 CCDC181Q5TID7 509 aa12.37□□□□□ -0.43
APTX-208ENST00000436040 INTS8Q75QN2 995 aaKnown RBP12.37□□□□□ -0.43
APTX-208ENST00000436040 USP37Q86T82 979 aa12.37□□□□□ -0.43
APTX-208ENST00000436040 CEP57Q86XR8 500 aa12.37□□□□□ -0.43
APTX-208ENST00000436040 CREG2Q8IUH2 290 aa12.37□□□□□ -0.43
APTX-208ENST00000436040 LRRC52Q8N7C0 313 aa12.37□□□□□ -0.43
APTX-208ENST00000436040 SPATA4Q8NEY3 305 aa12.37□□□□□ -0.43
APTX-208ENST00000436040 CNOT6LQ96LI5 555 aaKnown RBP12.37□□□□□ -0.43
APTX-208ENST00000436040 KLHL5Q96PQ7 755 aa12.37□□□□□ -0.43
APTX-208ENST00000436040 IGFLR1Q9H665 355 aa12.37□□□□□ -0.43
APTX-208ENST00000436040 DONSONQ9NYP3 566 aa12.37□□□□□ -0.43
APTX-208ENST00000436040 SIX4Q9UIU6 781 aa12.37□□□□□ -0.43
APTX-208ENST00000436040 COG5Q9UP83 839 aa12.37□□□□□ -0.43
APTX-208ENST00000436040 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.36□□□□□ -0.43
APTX-208ENST00000436040 PES1O00541 588 aaKnown RBP12.36□□□□□ -0.43
APTX-208ENST00000436040 CHUKO15111 745 aa12.36□□□□□ -0.43
APTX-208ENST00000436040 SLC16A3O15427 465 aaKnown RBP12.36□□□□□ -0.43
APTX-208ENST00000436040 VAMP7P51809 220 aa12.36□□□□□ -0.43
APTX-208ENST00000436040 RBP5P82980 135 aa12.36□□□□□ -0.43
APTX-208ENST00000436040 BFSP1Q12934 665 aa12.36□□□□□ -0.43
APTX-208ENST00000436040 KCNC3Q14003 757 aa12.36□□□□□ -0.43
APTX-208ENST00000436040 PSMD5Q16401 504 aa12.36□□□□□ -0.43
APTX-208ENST00000436040 SV2CQ496J9 727 aa12.36□□□□□ -0.43
APTX-208ENST00000436040 CCDC40Q4G0X9 1142 aa12.36□□□□□ -0.43
APTX-208ENST00000436040 TCERG1LQ5VWI1 586 aa12.36□□□□□ -0.43
APTX-208ENST00000436040 FBXW10Q5XX13 1052 aa12.36□□□□□ -0.43
APTX-208ENST00000436040 KDM7AQ6ZMT4 941 aa12.36□□□□□ -0.43
APTX-208ENST00000436040 ANKS3Q6ZW76 656 aa12.36□□□□□ -0.43
APTX-208ENST00000436040 IFT20Q8IY31 132 aa12.36□□□□□ -0.43
APTX-208ENST00000436040 APPL2Q8NEU8 664 aa12.36□□□□□ -0.43
APTX-208ENST00000436040 LNX1Q8TBB1 728 aaPredicted RBP12.36□□□□□ -0.43
APTX-208ENST00000436040 HLA-CQ95604 372 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms