RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 RARBP10826 455 aa8.29□□□□□ -1.08
PTPRK-212ENST00000434424 ALOX15P16050 662 aaPredicted RBP8.29□□□□□ -1.08
PTPRK-212ENST00000434424 BMP7P18075 431 aa8.29□□□□□ -1.08
PTPRK-212ENST00000434424 ARHGAP15Q53QZ3 475 aa8.29□□□□□ -1.08
PTPRK-212ENST00000434424 DCAF12L1Q5VU92 463 aa8.29□□□□□ -1.08
PTPRK-212ENST00000434424 AFMIDQ63HM1 303 aa8.29□□□□□ -1.08
PTPRK-212ENST00000434424 LIN54Q6MZP7 749 aa8.29□□□□□ -1.08
PTPRK-212ENST00000434424 TRMT10BQ6PF06 316 aaKnown RBP8.29□□□□□ -1.08
PTPRK-212ENST00000434424 KLHL17Q6TDP4 642 aa8.29□□□□□ -1.08
PTPRK-212ENST00000434424 C4orf50Q6ZRC1 276 aa8.29□□□□□ -1.08
PTPRK-212ENST00000434424 GATAD2AQ86YP4 633 aa8.29□□□□□ -1.08
PTPRK-212ENST00000434424 KYQ8NBH2 561 aa8.29□□□□□ -1.08
PTPRK-212ENST00000434424 PCYOX1LQ8NBM8 494 aa8.29□□□□□ -1.08
PTPRK-212ENST00000434424 OTUD7AQ8TE49 926 aaPredicted RBP8.29□□□□□ -1.08
PTPRK-212ENST00000434424 ZNF384Q8TF68 577 aa8.29□□□□□ -1.08
PTPRK-212ENST00000434424 KCNC2Q96PR1 638 aa8.29□□□□□ -1.08
PTPRK-212ENST00000434424 PRPF18Q99633 342 aaKnown RBP8.29□□□□□ -1.08
PTPRK-212ENST00000434424 C11orf84Q9BUA3 381 aaPredicted RBP8.29□□□□□ -1.08
PTPRK-212ENST00000434424 ALG13Q9NP73 1137 aaKnown RBP8.29□□□□□ -1.08
PTPRK-212ENST00000434424 SAYSD1Q9NPB0 183 aa8.29□□□□□ -1.08
PTPRK-212ENST00000434424 SRP68Q9UHB9 627 aaKnown RBP8.29□□□□□ -1.08
PTPRK-212ENST00000434424 HERC5Q9UII4 1024 aaKnown RBP8.29□□□□□ -1.08
PTPRK-212ENST00000434424 MID2Q9UJV3 735 aa8.29□□□□□ -1.08
PTPRK-212ENST00000434424 TMX2Q9Y320 296 aa8.29□□□□□ -1.08
PTPRK-212ENST00000434424 RBM8AQ9Y5S9 174 aaKnown RBP8.29□□□□□ -1.08
PTPRK-212ENST00000434424 CCDC141Q6ZP82 1450 aa8.29□□□□□ -1.08
PTPRK-212ENST00000434424 IRS2Q9Y4H2 1338 aa8.29□□□□□ -1.08
PTPRK-212ENST00000434424 ADGBQ8N7X0 1667 aa8.28□□□□□ -1.08
PTPRK-212ENST00000434424 MBD5Q9P267 1494 aa8.28□□□□□ -1.08
PTPRK-212ENST00000434424 ATRNL1Q5VV63 1379 aa8.28□□□□□ -1.08
PTPRK-212ENST00000434424 A0A0B4J269 797 aa8.28□□□□□ -1.08
PTPRK-212ENST00000434424 A6NLC8 198 aa8.28□□□□□ -1.08
PTPRK-212ENST00000434424 WNT10BO00744 389 aa8.28□□□□□ -1.08
PTPRK-212ENST00000434424 SLC43A1O75387 559 aa8.28□□□□□ -1.08
PTPRK-212ENST00000434424 SOAT2O75908 522 aa8.28□□□□□ -1.08
PTPRK-212ENST00000434424 BAIAP3O94812 1187 aa8.28□□□□□ -1.08
PTPRK-212ENST00000434424 A1BGP04217 495 aa8.28□□□□□ -1.08
PTPRK-212ENST00000434424 ITGA2BP08514 1039 aa8.28□□□□□ -1.08
PTPRK-212ENST00000434424 ATF2P15336 505 aa8.28□□□□□ -1.08
PTPRK-212ENST00000434424 PFKLP17858 780 aa8.28□□□□□ -1.08
PTPRK-212ENST00000434424 SLC11A2P49281 568 aa8.28□□□□□ -1.08
PTPRK-212ENST00000434424 PAPOLAP51003 745 aaKnown RBP8.28□□□□□ -1.08
PTPRK-212ENST00000434424 PTH1RQ03431 593 aa8.28□□□□□ -1.08
PTPRK-212ENST00000434424 TOMM20Q15388 145 aa8.28□□□□□ -1.08
PTPRK-212ENST00000434424 FAM47AQ5JRC9 791 aa8.28□□□□□ -1.08
PTPRK-212ENST00000434424 OTUD7BQ6GQQ9 843 aa8.28□□□□□ -1.08
PTPRK-212ENST00000434424 USP17L6PQ6QN14 398 aa8.28□□□□□ -1.08
PTPRK-212ENST00000434424 KRT28Q7Z3Y7 464 aa8.28□□□□□ -1.08
PTPRK-212ENST00000434424 C2CD5Q86YS7 1000 aa8.28□□□□□ -1.08
PTPRK-212ENST00000434424 CCDC117Q8IWD4 279 aaPredicted RBP8.28□□□□□ -1.08
PTPRK-212ENST00000434424 AOPEPQ8N6M6 819 aa8.28□□□□□ -1.08
PTPRK-212ENST00000434424 C1orf131Q8NDD1 294 aaKnown RBP8.28□□□□□ -1.08
PTPRK-212ENST00000434424 SIMC1Q8NDZ2 872 aa8.28□□□□□ -1.08
PTPRK-212ENST00000434424 DDX17Q92841 729 aaKnown RBP8.28□□□□□ -1.08
PTPRK-212ENST00000434424 LPPQ93052 612 aa8.28□□□□□ -1.08
PTPRK-212ENST00000434424 SPSB4Q96A44 273 aa8.28□□□□□ -1.08
PTPRK-212ENST00000434424 MAELQ96JY0 434 aaKnown RBP8.28□□□□□ -1.08
PTPRK-212ENST00000434424 KATNBL1Q9H079 304 aa8.28□□□□□ -1.08
PTPRK-212ENST00000434424 HEYLQ9NQ87 328 aaPredicted RBP8.28□□□□□ -1.08
PTPRK-212ENST00000434424 USP40Q9NVE5 1235 aa8.28□□□□□ -1.08
PTPRK-212ENST00000434424 CLIC5Q9NZA1 410 aa8.28□□□□□ -1.08
PTPRK-212ENST00000434424 POLG2Q9UHN1 485 aa8.28□□□□□ -1.08
PTPRK-212ENST00000434424 FAM184BQ9ULE4 1060 aa8.28□□□□□ -1.08
PTPRK-212ENST00000434424 SCAF8Q9UPN6 1271 aaKnown RBP8.28□□□□□ -1.08
PTPRK-212ENST00000434424 ERVK-7P63135 1459 aa8.27□□□□□ -1.09
PTPRK-212ENST00000434424 CDK12Q9NYV4 1490 aaPredicted RBP8.27□□□□□ -1.09
PTPRK-212ENST00000434424 TMEM2Q9UHN6 1383 aa8.27□□□□□ -1.09
PTPRK-212ENST00000434424 TISP43B9A030 160 aa8.27□□□□□ -1.09
PTPRK-212ENST00000434424 B9A039 149 aa8.27□□□□□ -1.09
PTPRK-212ENST00000434424 NRP1O14786 923 aa8.27□□□□□ -1.09
PTPRK-212ENST00000434424 KIAA0391O15091 583 aaKnown RBP8.27□□□□□ -1.09
PTPRK-212ENST00000434424 HOXC11O43248 304 aaPredicted RBP8.27□□□□□ -1.09
PTPRK-212ENST00000434424 FIBPO43427 364 aa8.27□□□□□ -1.09
PTPRK-212ENST00000434424 ASNA1O43681 348 aa8.27□□□□□ -1.09
PTPRK-212ENST00000434424 TOX4O94842 621 aa8.27□□□□□ -1.09
PTPRK-212ENST00000434424 INMTO95050 263 aa8.27□□□□□ -1.09
PTPRK-212ENST00000434424 GRPP07492 148 aa8.27□□□□□ -1.09
PTPRK-212ENST00000434424 UCP3P55916 312 aa8.27□□□□□ -1.09
PTPRK-212ENST00000434424 RBM6P78332 1123 aaKnown RBP8.27□□□□□ -1.09
PTPRK-212ENST00000434424 EFR3AQ14156 821 aa8.27□□□□□ -1.09
PTPRK-212ENST00000434424 SSPNQ14714 243 aa8.27□□□□□ -1.09
PTPRK-212ENST00000434424 PCOLCEQ15113 449 aa8.27□□□□□ -1.09
PTPRK-212ENST00000434424 TTLL5Q6EMB2 1281 aa8.27□□□□□ -1.09
PTPRK-212ENST00000434424 SEM1Q6ZVN7 128 aa8.27□□□□□ -1.09
PTPRK-212ENST00000434424 USP49Q70CQ1 688 aa8.27□□□□□ -1.09
PTPRK-212ENST00000434424 PDSS2Q86YH6 399 aa8.27□□□□□ -1.09
PTPRK-212ENST00000434424 ZDHHC14Q8IZN3 488 aa8.27□□□□□ -1.09
PTPRK-212ENST00000434424 SLC7A6OSQ96CW6 309 aaPredicted RBP8.27□□□□□ -1.09
PTPRK-212ENST00000434424 ZBTB10Q96DT7 871 aa8.27□□□□□ -1.09
PTPRK-212ENST00000434424 MYOCQ99972 504 aa8.27□□□□□ -1.09
PTPRK-212ENST00000434424 DHX36Q9H2U1 1008 aaKnown RBP8.27□□□□□ -1.09
PTPRK-212ENST00000434424 BLOC1S4Q9NUP1 217 aa8.27□□□□□ -1.09
PTPRK-212ENST00000434424 CNOT6Q9ULM6 557 aaKnown RBP8.27□□□□□ -1.09
PTPRK-212ENST00000434424 AFG3L2Q9Y4W6 797 aa8.27□□□□□ -1.09
PTPRK-212ENST00000434424 KCTD3Q9Y597 815 aa8.27□□□□□ -1.09
PTPRK-212ENST00000434424 CTDP1Q9Y5B0 961 aaPredicted RBP8.27□□□□□ -1.09
PTPRK-212ENST00000434424 TCRBV7S2A1N4TA0A589 114 aa8.26□□□□□ -1.09
PTPRK-212ENST00000434424 B4E171 279 aa8.26□□□□□ -1.09
PTPRK-212ENST00000434424 TRIM13O60858 407 aa8.26□□□□□ -1.09
PTPRK-212ENST00000434424 DNAJB5O75953 348 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms