RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 RIN2Q8WYP3 895 aaPredicted RBP28.04■■■□□ 2.08
TMEM248-205ENST00000433271 B3GNT5Q9BYG0 378 aa28.04■■■□□ 2.08
TMEM248-205ENST00000433271 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.03■■■□□ 2.08
TMEM248-205ENST00000433271 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.03■■■□□ 2.08
TMEM248-205ENST00000433271 CCP110O43303 1012 aa28.03■■■□□ 2.08
TMEM248-205ENST00000433271 ADORA2BP29275 332 aa28.03■■■□□ 2.08
TMEM248-205ENST00000433271 NSFP46459 744 aaKnown RBP28.03■■■□□ 2.08
TMEM248-205ENST00000433271 GLUD2P49448 558 aa28.03■■■□□ 2.08
TMEM248-205ENST00000433271 VAV2P52735 878 aa28.03■■■□□ 2.08
TMEM248-205ENST00000433271 PAQR9Q6ZVX9 377 aa28.03■■■□□ 2.08
TMEM248-205ENST00000433271 KIAA1328Q86T90 577 aa28.03■■■□□ 2.08
TMEM248-205ENST00000433271 DCP1BQ8IZD4 617 aaKnown RBP28.03■■■□□ 2.08
TMEM248-205ENST00000433271 VPS52Q8N1B4 723 aa28.03■■■□□ 2.08
TMEM248-205ENST00000433271 TXLNBQ8N3L3 684 aa28.03■■■□□ 2.08
TMEM248-205ENST00000433271 MTRRQ9UBK8 725 aa28.03■■■□□ 2.08
TMEM248-205ENST00000433271 INTUQ9ULD6 942 aa28.03■■■□□ 2.08
TMEM248-205ENST00000433271 BACE2Q9Y5Z0 518 aa28.03■■■□□ 2.08
TMEM248-205ENST00000433271 H2AFZP0C0S5 128 aa28.03■■■□□ 2.08
TMEM248-205ENST00000433271 CTNNB1P35222 781 aa28.03■■■□□ 2.08
TMEM248-205ENST00000433271 GPD2P43304 727 aa28.03■■■□□ 2.08
TMEM248-205ENST00000433271 PRSS55Q6UWB4 352 aaPredicted RBP28.03■■■□□ 2.08
TMEM248-205ENST00000433271 H2AFVQ71UI9 128 aa28.03■■■□□ 2.08
TMEM248-205ENST00000433271 TTC30AQ86WT1 665 aa28.03■■■□□ 2.08
TMEM248-205ENST00000433271 GPR65Q8IYL9 337 aa28.03■■■□□ 2.08
TMEM248-205ENST00000433271 UBA3Q8TBC4 463 aa28.03■■■□□ 2.08
TMEM248-205ENST00000433271 ATP8B3O60423 1300 aa28.03■■■□□ 2.08
TMEM248-205ENST00000433271 CA3P07451 260 aa28.02■■■□□ 2.08
TMEM248-205ENST00000433271 C1orf131Q8NDD1 294 aaKnown RBP28.02■■■□□ 2.08
TMEM248-205ENST00000433271 MED10Q9BTT4 135 aa28.02■■■□□ 2.08
TMEM248-205ENST00000433271 TMLHEQ9NVH6 421 aa28.02■■■□□ 2.08
TMEM248-205ENST00000433271 TNRC18O15417 2968 aaPredicted RBP28.02■■■□□ 2.08
TMEM248-205ENST00000433271 RANBP2P49792 3224 aaKnown RBP28.02■■■□□ 2.08
TMEM248-205ENST00000433271 C5orf67F2Z3F1 127 aa28.01■■■□□ 2.07
TMEM248-205ENST00000433271 CLDN5O00501 218 aa28.01■■■□□ 2.07
TMEM248-205ENST00000433271 BCAT1P54687 386 aa28.01■■■□□ 2.07
TMEM248-205ENST00000433271 GALCP54803 685 aa28.01■■■□□ 2.07
TMEM248-205ENST00000433271 PSMD5Q16401 504 aa28.01■■■□□ 2.07
TMEM248-205ENST00000433271 NFE2Q16621 373 aaPredicted RBP28.01■■■□□ 2.07
TMEM248-205ENST00000433271 RSPO2Q6UXX9 243 aaPredicted RBP28.01■■■□□ 2.07
TMEM248-205ENST00000433271 DNAAF5Q86Y56 855 aa28.01■■■□□ 2.07
TMEM248-205ENST00000433271 PHF13Q86YI8 300 aaPredicted RBP28.01■■■□□ 2.07
TMEM248-205ENST00000433271 SECISBP2LQ93073 1101 aaKnown RBP28.01■■■□□ 2.07
TMEM248-205ENST00000433271 MYLPFQ96A32 169 aa28.01■■■□□ 2.07
TMEM248-205ENST00000433271 C17orf80Q9BSJ5 609 aa28.01■■■□□ 2.07
TMEM248-205ENST00000433271 PACSIN1Q9BY11 444 aa28.01■■■□□ 2.07
TMEM248-205ENST00000433271 DUSP16Q9BY84 665 aa28.01■■■□□ 2.07
TMEM248-205ENST00000433271 TRMT1Q9NXH9 659 aaKnown RBP28.01■■■□□ 2.07
TMEM248-205ENST00000433271 LZTS1Q9Y250 596 aa28.01■■■□□ 2.07
TMEM248-205ENST00000433271 ANKRD62A6NC57 917 aa28■■■□□ 2.07
TMEM248-205ENST00000433271 CAPN15O75808 1086 aa28■■■□□ 2.07
TMEM248-205ENST00000433271 URODP06132 367 aa28■■■□□ 2.07
TMEM248-205ENST00000433271 RB1P06400 928 aa28■■■□□ 2.07
TMEM248-205ENST00000433271 SETSIPP0DME0 302 aa28■■■□□ 2.07
TMEM248-205ENST00000433271 BST2Q10589 180 aaKnown RBP28■■■□□ 2.07
TMEM248-205ENST00000433271 C4orf50Q6ZRC1 276 aa28■■■□□ 2.07
TMEM248-205ENST00000433271 ZNF662Q6ZS27 426 aa28■■■□□ 2.07
TMEM248-205ENST00000433271 C17orf53Q8N3J3 647 aaPredicted RBP28■■■□□ 2.07
TMEM248-205ENST00000433271 SLC35F5Q8WV83 523 aa28■■■□□ 2.07
TMEM248-205ENST00000433271 RCCD1A6NED2 376 aa28■■■□□ 2.07
TMEM248-205ENST00000433271 C2CD2LO14523 706 aa28■■■□□ 2.07
TMEM248-205ENST00000433271 PJA2O43164 708 aa28■■■□□ 2.07
TMEM248-205ENST00000433271 ARHGEF15O94989 841 aa28■■■□□ 2.07
TMEM248-205ENST00000433271 OR4Q2P0C623 313 aa28■■■□□ 2.07
TMEM248-205ENST00000433271 MMP8P22894 467 aa28■■■□□ 2.07
TMEM248-205ENST00000433271 MSNP26038 577 aaKnown RBP28■■■□□ 2.07
TMEM248-205ENST00000433271 SLC8A3P57103 927 aa28■■■□□ 2.07
TMEM248-205ENST00000433271 SLC39A12Q504Y0 691 aa28■■■□□ 2.07
TMEM248-205ENST00000433271 SLC8B1Q6J4K2 584 aa28■■■□□ 2.07
TMEM248-205ENST00000433271 FAM35AQ86V20 835 aa28■■■□□ 2.07
TMEM248-205ENST00000433271 REXO1L1PQ8IX06 675 aa28■■■□□ 2.07
TMEM248-205ENST00000433271 FBXO22Q8NEZ5 403 aa28■■■□□ 2.07
TMEM248-205ENST00000433271 VCPIP1Q96JH7 1222 aa28■■■□□ 2.07
TMEM248-205ENST00000433271 SAMD11Q96NU1 681 aa28■■■□□ 2.07
TMEM248-205ENST00000433271 NOX5Q96PH1 765 aa28■■■□□ 2.07
TMEM248-205ENST00000433271 MRPL17Q9NRX2 175 aaKnown RBP28■■■□□ 2.07
TMEM248-205ENST00000433271 CYTH4Q9UIA0 394 aa28■■■□□ 2.07
TMEM248-205ENST00000433271 YBX2Q9Y2T7 364 aaKnown RBP28■■■□□ 2.07
TMEM248-205ENST00000433271 PDE4DIPQ5VU43 2346 aa27.99■■■□□ 2.07
TMEM248-205ENST00000433271 FAM170AA1A519 330 aa27.99■■■□□ 2.07
TMEM248-205ENST00000433271 USP27XA6NNY8 438 aa27.99■■■□□ 2.07
TMEM248-205ENST00000433271 FAM200BP0CF97 657 aa27.99■■■□□ 2.07
TMEM248-205ENST00000433271 NPR3P17342 541 aa27.99■■■□□ 2.07
TMEM248-205ENST00000433271 PDE4CQ08493 712 aa27.99■■■□□ 2.07
TMEM248-205ENST00000433271 SMARCB1Q12824 385 aa27.99■■■□□ 2.07
TMEM248-205ENST00000433271 KIF5AQ12840 1032 aa27.99■■■□□ 2.07
TMEM248-205ENST00000433271 GPR17Q13304 367 aa27.99■■■□□ 2.07
TMEM248-205ENST00000433271 MON1BQ7L1V2 547 aa27.99■■■□□ 2.07
TMEM248-205ENST00000433271 SPATA2LQ8IUW3 424 aaPredicted RBP27.99■■■□□ 2.07
TMEM248-205ENST00000433271 TDHQ8IZJ6 230 aa27.99■■■□□ 2.07
TMEM248-205ENST00000433271 MCOLN2Q8IZK6 566 aa27.99■■■□□ 2.07
TMEM248-205ENST00000433271 STK32AQ8WU08 396 aa27.99■■■□□ 2.07
TMEM248-205ENST00000433271 SMARCD1Q96GM5 515 aa27.99■■■□□ 2.07
TMEM248-205ENST00000433271 PPP1R13BQ96KQ4 1090 aa27.99■■■□□ 2.07
TMEM248-205ENST00000433271 TGS1Q96RS0 853 aaKnown RBP27.99■■■□□ 2.07
TMEM248-205ENST00000433271 PBX4Q9BYU1 374 aa27.99■■■□□ 2.07
TMEM248-205ENST00000433271 LACRTQ9GZZ8 138 aa27.99■■■□□ 2.07
TMEM248-205ENST00000433271 ZBP1Q9H171 429 aa27.99■■■□□ 2.07
TMEM248-205ENST00000433271 KRT82Q9NSB4 513 aa27.99■■■□□ 2.07
TMEM248-205ENST00000433271 TFR2Q9UP52 801 aa27.99■■■□□ 2.07
TMEM248-205ENST00000433271 CDY1Q9Y6F8 540 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms