RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 FLCNQ8NFG4 579 aa10.48□□□□□ -0.73
HDAC6-207ENST00000430858 MYCBPAPQ8TBZ2 947 aa10.48□□□□□ -0.73
HDAC6-207ENST00000430858 DEPDC1BQ8WUY9 529 aa10.48□□□□□ -0.73
HDAC6-207ENST00000430858 MYLPFQ96A32 169 aa10.48□□□□□ -0.73
HDAC6-207ENST00000430858 PCED1BQ96HM7 432 aa10.48□□□□□ -0.73
HDAC6-207ENST00000430858 DHTKD1Q96HY7 919 aaPredicted RBP10.48□□□□□ -0.73
HDAC6-207ENST00000430858 ZSWIM3Q96MP5 696 aa10.48□□□□□ -0.73
HDAC6-207ENST00000430858 IMPG2Q9BZV3 1241 aa10.48□□□□□ -0.73
HDAC6-207ENST00000430858 TASP1Q9H6P5 420 aa10.48□□□□□ -0.73
HDAC6-207ENST00000430858 IL21Q9HBE4 155 aa10.48□□□□□ -0.73
HDAC6-207ENST00000430858 TMEM8AQ9HCN3 771 aa10.48□□□□□ -0.73
HDAC6-207ENST00000430858 CRTAC1Q9NQ79 661 aa10.48□□□□□ -0.73
HDAC6-207ENST00000430858 ARHGEF3Q9NR81 526 aa10.48□□□□□ -0.73
HDAC6-207ENST00000430858 UXTQ9UBK9 157 aaPredicted RBP10.48□□□□□ -0.73
HDAC6-207ENST00000430858 MAN1B1Q9UKM7 699 aa10.48□□□□□ -0.73
HDAC6-207ENST00000430858 CA14Q9ULX7 337 aa10.48□□□□□ -0.73
HDAC6-207ENST00000430858 SOBPA7XYQ1 873 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 TRIM66O15016 1216 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 SLC16A3O15427 465 aaKnown RBP10.47□□□□□ -0.73
HDAC6-207ENST00000430858 STX10O60499 249 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 NOL4O94818 638 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 HLA-DRAP01903 254 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 PSMC3P17980 439 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 PTPN1P18031 435 aaKnown RBP10.47□□□□□ -0.73
HDAC6-207ENST00000430858 RFX1P22670 979 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 BDNFP23560 247 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 CCNE1P24864 410 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 DDX6P26196 483 aaKnown RBP eCLIP10.47□□□□□ -0.736e-6■■■■□ 19.3
HDAC6-207ENST00000430858 WEE1P30291 646 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 GRIK1P39086 918 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 GCLMP48507 274 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 PMS1P54277 932 aaKnown RBP10.47□□□□□ -0.73
HDAC6-207ENST00000430858 CDH8P55286 799 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 CYP27A1Q02318 531 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 PRKCQQ04759 706 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 PPP3CAQ08209 521 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 CCDC142Q17RM4 750 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 MDH1BQ5I0G3 518 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 GPR158Q5T848 1215 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 SDHAF4Q5VUM1 108 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 CWF19L1Q69YN2 538 aaKnown RBP10.47□□□□□ -0.73
HDAC6-207ENST00000430858 KRT39Q6A163 491 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 ISM2Q6H9L7 571 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 PHLDB3Q6NSJ2 640 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 ARID3BQ8IVW6 561 aaPredicted RBP10.47□□□□□ -0.73
HDAC6-207ENST00000430858 MFSD6LQ8IWD5 586 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 SCN4BQ8IWT1 228 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 B3GALNT2Q8NCR0 500 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 CCDC150Q8NCX0 1101 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 DNASE1L2Q92874 299 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 EEF2KMTQ96G04 330 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 TRMT2BQ96GJ1 504 aaKnown RBP10.47□□□□□ -0.73
HDAC6-207ENST00000430858 SHDQ96IW2 340 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 TNIP3Q96KP6 325 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 SPATA17Q96L03 361 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 MYRFLQ96LU7 910 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 TRMT61BQ9BVS5 477 aaKnown RBP10.47□□□□□ -0.73
HDAC6-207ENST00000430858 PLA2G2FQ9BZM2 168 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 ELOVL4Q9GZR5 314 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 SMYD3Q9H7B4 428 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 OBP2AQ9NY56 170 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 MAGED2Q9UNF1 606 aaPredicted RBP10.47□□□□□ -0.73
HDAC6-207ENST00000430858 NME7Q9Y5B8 376 aa10.47□□□□□ -0.73
HDAC6-207ENST00000430858 TRIM49BA6NDI0 452 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 SLC38A8A6NNN8 435 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 HEPACAM2A8MVW5 462 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 STK25O00506 426 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 DPYSL4O14531 572 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 F11P03951 625 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 TRIM21P19474 475 aaKnown RBP10.46□□□□□ -0.73
HDAC6-207ENST00000430858 AOC1P19801 751 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 ANXA13P27216 316 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 VIPR2P41587 438 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 RAP1GAPP47736 663 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 NLRP12P59046 1061 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 STARD6P59095 220 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 NOP14P78316 857 aaKnown RBP10.46□□□□□ -0.73
HDAC6-207ENST00000430858 CYP4F8P98187 520 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 MORC3Q14149 939 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 GRM2Q14416 872 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 MLF2Q15773 248 aaPredicted RBP10.46□□□□□ -0.73
HDAC6-207ENST00000430858 SLC44A4Q53GD3 710 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 STXBP5Q5T5C0 1151 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 IER5LQ5T953 404 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 FOXR2Q6PJQ5 311 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 VITQ6UXI7 678 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 SCARA5Q6ZMJ2 495 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 TMEM150AQ86TG1 271 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 UNC93AQ86WB7 457 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 TMEM105Q8N8V8 129 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 TRIML1Q8N9V2 468 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 TAS1R2Q8TE23 839 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 MRPS31Q92665 395 aaKnown RBP10.46□□□□□ -0.73
HDAC6-207ENST00000430858 IRF7Q92985 503 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 FAXDC2Q96IV6 333 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 C8orf48Q96LL4 319 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 CEP63Q96MT8 703 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 SDCBP2Q9H190 292 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 DPEP3Q9H4B8 488 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 MMRN2Q9H8L6 949 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms