RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 FBF1Q8TES7 1133 aa12.06□□□□□ -0.48
CECR3-201ENST00000428828 NCSTNQ92542 709 aa12.06□□□□□ -0.48
CECR3-201ENST00000428828 BADQ92934 168 aa12.06□□□□□ -0.48
CECR3-201ENST00000428828 CCDC42Q96M95 316 aa12.06□□□□□ -0.48
CECR3-201ENST00000428828 CEP63Q96MT8 703 aa12.06□□□□□ -0.48
CECR3-201ENST00000428828 RAB3IPQ96QF0 476 aaPredicted RBP12.06□□□□□ -0.48
CECR3-201ENST00000428828 DNAAF2Q9NVR5 837 aaKnown RBP12.06□□□□□ -0.48
CECR3-201ENST00000428828 SNTG2Q9NY99 539 aa12.06□□□□□ -0.48
CECR3-201ENST00000428828 CIDEBQ9UHD4 219 aa12.06□□□□□ -0.48
CECR3-201ENST00000428828 PCDHA13Q9Y5I0 950 aa12.06□□□□□ -0.48
CECR3-201ENST00000428828 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.06□□□□□ -0.48
CECR3-201ENST00000428828 DUSP10Q9Y6W6 482 aa12.06□□□□□ -0.48
CECR3-201ENST00000428828 FAM189A1O60320 539 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 STAG3L1P0CL83 205 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 CXCL8P10145 99 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 SP100P23497 879 aaPredicted RBP12.05□□□□□ -0.48
CECR3-201ENST00000428828 AKAP5P24588 427 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 PSMC2P35998 433 aaKnown RBP12.05□□□□□ -0.48
CECR3-201ENST00000428828 MTIF2P46199 727 aaKnown RBP12.05□□□□□ -0.48
CECR3-201ENST00000428828 DEUP1Q05D60 604 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 MYBPC3Q14896 1274 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 OR52E8Q6IFG1 317 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 HOOK3Q86VS8 718 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 IRF2BP1Q8IU81 584 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 FAM114A1Q8IWE2 563 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 ENDOVQ8N8Q3 282 aaKnown RBP12.05□□□□□ -0.48
CECR3-201ENST00000428828 LINC01599Q8WXQ3 324 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 LPPQ93052 612 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 VCX3BQ9H321 246 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 MMADHCQ9H3L0 296 aaPredicted RBP12.05□□□□□ -0.48
CECR3-201ENST00000428828 MMRN2Q9H8L6 949 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 VCX3AQ9NNX9 186 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 CHST12Q9NRB3 414 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 FAM105AQ9NUU6 356 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 PCMTD2Q9NV79 361 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 RBAKQ9NYW8 714 aaPredicted RBP12.05□□□□□ -0.48
CECR3-201ENST00000428828 CTTNBP2NLQ9P2B4 639 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 ZNF232Q9UNY5 417 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 PLAGL2Q9UPG8 496 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 AGAP1Q9UPQ3 857 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 IPPQ9Y573 584 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 FNDC1Q4ZHG4 1894 aaPredicted RBP12.05□□□□□ -0.48
CECR3-201ENST00000428828 ZNF263O14978 683 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 SLC16A3O15427 465 aaKnown RBP12.05□□□□□ -0.48
CECR3-201ENST00000428828 PARNO95453 639 aaKnown RBP12.05□□□□□ -0.48
CECR3-201ENST00000428828 LDHAP00338 332 aaKnown RBP12.05□□□□□ -0.48
CECR3-201ENST00000428828 CXCL10P02778 98 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 CCNB1P14635 433 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 CALB2P22676 271 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 MMP13P45452 471 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 TTC3P53804 2025 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 MAGOHP61326 146 aaKnown RBP12.05□□□□□ -0.48
CECR3-201ENST00000428828 KCNJ2P63252 427 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 TMED1Q13445 227 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 DSC3Q14574 896 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 TSNAXIP1Q2TAA8 658 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 TCERG1LQ5VWI1 586 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 FOXR2Q6PJQ5 311 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 RTN4RL1Q86UN2 441 aaPredicted RBP12.05□□□□□ -0.48
CECR3-201ENST00000428828 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.05□□□□□ -0.48
CECR3-201ENST00000428828 ATXN2LQ8WWM7 1075 aaKnown RBP12.05□□□□□ -0.48
CECR3-201ENST00000428828 MAGOHBQ96A72 148 aaKnown RBP12.05□□□□□ -0.48
CECR3-201ENST00000428828 CCDC127Q96BQ5 260 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 KLHL29Q96CT2 875 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 PGM2Q96G03 612 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 NOX5Q96PH1 765 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 SYT15Q9BQS2 421 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 FAM167BQ9BTA0 163 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 IQCGQ9H095 443 aaKnown RBP12.05□□□□□ -0.48
CECR3-201ENST00000428828 ECT2Q9H8V3 914 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 RNPEPL1Q9HAU8 725 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 RNF19AQ9NV58 838 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 PARP2Q9UGN5 583 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 NOVA2Q9UNW9 492 aaKnown RBP12.05□□□□□ -0.48
CECR3-201ENST00000428828 TFR2Q9UP52 801 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 PCDHB2Q9Y5E7 798 aa12.05□□□□□ -0.48
CECR3-201ENST00000428828 TNRC18O15417 2968 aaPredicted RBP12.05□□□□□ -0.48
CECR3-201ENST00000428828 MEIS3P2A8K0S8 358 aa12.04□□□□□ -0.48
CECR3-201ENST00000428828 KIAA0391O15091 583 aaKnown RBP12.04□□□□□ -0.48
CECR3-201ENST00000428828 SART1O43290 800 aaKnown RBP12.04□□□□□ -0.48
CECR3-201ENST00000428828 TRIM49P0CI25 452 aa12.04□□□□□ -0.48
CECR3-201ENST00000428828 TRIM49CP0CI26 452 aa12.04□□□□□ -0.48
CECR3-201ENST00000428828 DLATP10515 647 aaKnown RBP12.04□□□□□ -0.48
CECR3-201ENST00000428828 KRT13P13646 458 aa12.04□□□□□ -0.48
CECR3-201ENST00000428828 RFC2P35250 354 aa12.04□□□□□ -0.48
CECR3-201ENST00000428828 PDE6CP51160 858 aa12.04□□□□□ -0.48
CECR3-201ENST00000428828 WNT7BP56706 349 aa12.04□□□□□ -0.48
CECR3-201ENST00000428828 CCDC15Q0P6D6 951 aa12.04□□□□□ -0.48
CECR3-201ENST00000428828 MYBPC2Q14324 1141 aa12.04□□□□□ -0.48
CECR3-201ENST00000428828 KLHDC7AQ5VTJ3 777 aa12.04□□□□□ -0.48
CECR3-201ENST00000428828 ARMC3Q5W041 872 aa12.04□□□□□ -0.48
CECR3-201ENST00000428828 LMBRD2Q68DH5 695 aaPredicted RBP12.04□□□□□ -0.48
CECR3-201ENST00000428828 SMG8Q8ND04 991 aaKnown RBP12.04□□□□□ -0.48
CECR3-201ENST00000428828 SEC14L1Q92503 715 aa12.04□□□□□ -0.48
CECR3-201ENST00000428828 APBB2Q92870 758 aa12.04□□□□□ -0.48
CECR3-201ENST00000428828 AZIN2Q96A70 460 aa12.04□□□□□ -0.48
CECR3-201ENST00000428828 FAM84AQ96KN4 292 aa12.04□□□□□ -0.48
CECR3-201ENST00000428828 ERGIC2Q96RQ1 377 aa12.04□□□□□ -0.48
CECR3-201ENST00000428828 FTHL17Q9BXU8 183 aa12.04□□□□□ -0.48
CECR3-201ENST00000428828 RNF39Q9H2S5 420 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms