RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 TAS1R3Q7RTX0 852 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 PALB2Q86YC2 1186 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 NAV2Q8IVL1 2488 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 ZBTB8OSQ8IWT0 167 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 CCDC65Q8IXS2 484 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 ZC3H3Q8IXZ2 948 aaKnown RBP9.35□□□□□ -0.91
HDAC1-202ENST00000428704 GSTCDQ8NEC7 633 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 KIFAP3Q92845 792 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 FGF13Q92913 245 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 ZFP42Q96MM3 310 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 GAD1Q99259 594 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 TUBGCP2Q9BSJ2 902 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 HERC2P3Q9BVR0 1158 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 EDEM3Q9BZQ6 932 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 C2orf40Q9H1Z8 148 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 VPS16Q9H269 839 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 LMAN1LQ9HAT1 526 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 PANK4Q9NVE7 773 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 MARCH5Q9NX47 278 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 MIOSQ9NXC5 875 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 TAB2Q9NYJ8 693 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 CAPN11Q9UMQ6 739 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 DNM3Q9UQ16 869 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 PPP2R2CQ9Y2T4 447 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 ZMYM2Q9UBW7 1377 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 VWA8A3KMH1 1905 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 CITO14578 2027 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 A0A1W2PQJ5 194 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 ARL5CA6NH57 179 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 F8W810 466 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 ACKR2O00590 384 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 DXOO77932 396 aaKnown RBP9.34□□□□□ -0.91
HDAC1-202ENST00000428704 PAPLNO95428 1278 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 GNA14O95837 355 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 EFEMP2O95967 443 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 POMCP01189 267 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 ALDH2P05091 517 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 CCDC175P0C221 793 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 JUNDP17535 347 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 AKAP5P24588 427 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 GUCY2CP25092 1073 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 NPTX2P47972 431 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 GLUD2P49448 558 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 SCNN1GP51170 649 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 NTHL1P78549 312 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 CDK17Q00537 523 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 PPP2R5AQ15172 486 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 COL28A1Q2UY09 1125 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 FAM26FQ5R3K3 315 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 DAB2IPQ5VWQ8 1189 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 ZNF662Q6ZS27 426 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 COLGALT2Q8IYK4 626 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 OR8K1Q8NGG5 319 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 DEPTORQ8TB45 409 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 ADAM32Q8TC27 787 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 URGCPQ8TCY9 931 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 LOXL4Q96JB6 756 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 CEP63Q96MT8 703 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 DNAJC7Q99615 494 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 EDEM2Q9BV94 578 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 APOL6Q9BWW8 343 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 TTYH3Q9C0H2 523 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 CXCL16Q9H2A7 254 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 SMOC1Q9H4F8 434 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 SLC39A2Q9NP94 309 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 ABHD10Q9NUJ1 306 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 ARHGAP28Q9P2N2 729 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 FAN1Q9Y2M0 1017 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 GPSM3Q9Y4H4 160 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 NEUROG3Q9Y4Z2 214 aa9.34□□□□□ -0.91
HDAC1-202ENST00000428704 LAMA5O15230 3695 aa9.33□□□□□ -0.92
HDAC1-202ENST00000428704 NPHP3-ACAD11A0A0J9YXS1 232 aa9.33□□□□□ -0.92
HDAC1-202ENST00000428704 CFAP99D6REC4 459 aa9.33□□□□□ -0.92
HDAC1-202ENST00000428704 ABLIM1O14639 778 aa9.33□□□□□ -0.92
HDAC1-202ENST00000428704 PTGESO14684 152 aa9.33□□□□□ -0.92
HDAC1-202ENST00000428704 NRP1O14786 923 aa9.33□□□□□ -0.92
HDAC1-202ENST00000428704 TGM5O43548 720 aa9.33□□□□□ -0.92
HDAC1-202ENST00000428704 EPN2O95208 641 aa9.33□□□□□ -0.92
HDAC1-202ENST00000428704 HNRNPH3P31942 346 aaKnown RBP9.33□□□□□ -0.92
HDAC1-202ENST00000428704 EFNA5P52803 228 aa9.33□□□□□ -0.92
HDAC1-202ENST00000428704 PEX3P56589 373 aa9.33□□□□□ -0.92
HDAC1-202ENST00000428704 FKBP3Q00688 224 aaKnown RBP9.33□□□□□ -0.92
HDAC1-202ENST00000428704 RAD51AP2Q09MP3 1159 aa9.33□□□□□ -0.92
HDAC1-202ENST00000428704 PRPF4BQ13523 1007 aaKnown RBP9.33□□□□□ -0.92
HDAC1-202ENST00000428704 MEA1Q16626 185 aa9.33□□□□□ -0.92
HDAC1-202ENST00000428704 MAPK6Q16659 721 aa9.33□□□□□ -0.92
HDAC1-202ENST00000428704 MAN2A1Q16706 1144 aa9.33□□□□□ -0.92
HDAC1-202ENST00000428704 EDRF1Q3B7T1 1238 aa9.33□□□□□ -0.92
HDAC1-202ENST00000428704 ARSHQ5FYA8 562 aa9.33□□□□□ -0.92
HDAC1-202ENST00000428704 MIIPQ5JXC2 388 aa9.33□□□□□ -0.92
HDAC1-202ENST00000428704 DYMQ7RTS9 669 aa9.33□□□□□ -0.92
HDAC1-202ENST00000428704 GLYCTKQ8IVS8 523 aa9.33□□□□□ -0.92
HDAC1-202ENST00000428704 RNF168Q8IYW5 571 aaPredicted RBP9.33□□□□□ -0.92
HDAC1-202ENST00000428704 IFT74Q96LB3 600 aa9.33□□□□□ -0.92
HDAC1-202ENST00000428704 CNOT6LQ96LI5 555 aaKnown RBP9.33□□□□□ -0.92
HDAC1-202ENST00000428704 BBC3Q96PG8 261 aaPredicted RBP9.33□□□□□ -0.92
HDAC1-202ENST00000428704 FAM193BQ96PV7 902 aaPredicted RBP9.33□□□□□ -0.92
HDAC1-202ENST00000428704 TSG101Q99816 390 aa9.33□□□□□ -0.92
HDAC1-202ENST00000428704 TMEM175Q9BSA9 504 aa9.33□□□□□ -0.92
HDAC1-202ENST00000428704 TRIM6Q9C030 488 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms