RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 TMEM74BQ9NUR3 256 aa2.98□□□□□ -1.93
PTPRC-208ENST00000427110 CTTNBP2NLQ9P2B4 639 aa2.98□□□□□ -1.93
PTPRC-208ENST00000427110 TLK1Q9UKI8 766 aa2.98□□□□□ -1.93
PTPRC-208ENST00000427110 AGAP1Q9UPQ3 857 aa2.98□□□□□ -1.93
PTPRC-208ENST00000427110 TMX2Q9Y320 296 aa2.98□□□□□ -1.93
PTPRC-208ENST00000427110 PCSK5Q92824 1860 aa2.98□□□□□ -1.93
PTPRC-208ENST00000427110 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 CCDC195A0A1B0GUA6 201 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 POM121BA6NF01 834 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 PRSS29PA6NIE9 313 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 MASP2O00187 686 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 RASSF9O75901 435 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 DNAJB5O75953 348 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 THP07101 528 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 KCNA2P16389 499 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 GATA3P23771 443 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 RPS16P62249 146 aaKnown RBP2.97□□□□□ -1.93
PTPRC-208ENST00000427110 KRT17Q04695 432 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 DAG1Q14118 895 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 ZNF169Q14929 603 aaPredicted RBP2.97□□□□□ -1.93
PTPRC-208ENST00000427110 FAM160B1Q5W0V3 765 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 SP5Q6BEB4 398 aaPredicted RBP2.97□□□□□ -1.93
PTPRC-208ENST00000427110 XRRA1Q6P2D8 792 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 MORC1Q86VD1 984 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 SESTD1Q86VW0 696 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 ARHGEF25Q86VW2 580 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 COLGALT2Q8IYK4 626 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 DNAJC5GQ8N7S2 189 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 BOLLQ8N9W6 283 aaKnown RBP2.97□□□□□ -1.93
PTPRC-208ENST00000427110 VPS37AQ8NEZ2 397 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 RAPGEF4Q8WZA2 1011 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 TFAP2BQ92481 460 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 LPIN2Q92539 896 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 PMM1Q92871 262 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 GJA10Q969M2 543 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 FUBP1Q96AE4 644 aaKnown RBP2.97□□□□□ -1.93
PTPRC-208ENST00000427110 ZNF764Q96H86 408 aaPredicted RBP2.97□□□□□ -1.93
PTPRC-208ENST00000427110 RIPOR3Q96MK2 946 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 SLC46A1Q96NT5 459 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 STK31Q9BXU1 1019 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 ZNF518BQ9C0D4 1074 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 ZNF700Q9H0M5 742 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 CERS4Q9HA82 394 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 ASB6Q9NWX5 421 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 ZSCAN32Q9NX65 697 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 KCTD5Q9NXV2 234 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 STK32BQ9NY57 414 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 FOXJ2Q9P0K8 574 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 PTGFRNQ9P2B2 879 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 LRIT1Q9P2V4 623 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 XPR1Q9UBH6 696 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 ITGB1BP2Q9UKP3 347 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 HDAC9Q9UKV0 1011 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 DMTF1Q9Y222 760 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.97□□□□□ -1.93
PTPRC-208ENST00000427110 DAAM1Q9Y4D1 1078 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 PAXBP1Q9Y5B6 917 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 RAD54BQ9Y620 910 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 COMMD10Q9Y6G5 202 aa2.97□□□□□ -1.93
PTPRC-208ENST00000427110 PRAMEF33A0A0G2JMD5 474 aa2.96□□□□□ -1.94
PTPRC-208ENST00000427110 MYADML2A6NDP7 307 aa2.96□□□□□ -1.94
PTPRC-208ENST00000427110 TMEM233B4DJY2 109 aa2.96□□□□□ -1.94
PTPRC-208ENST00000427110 F8W8V4 182 aa2.96□□□□□ -1.94
PTPRC-208ENST00000427110 PYCARD-AS1I3L0S3 204 aa2.96□□□□□ -1.94
PTPRC-208ENST00000427110 YY2O15391 372 aa2.96□□□□□ -1.94
PTPRC-208ENST00000427110 PEX1O43933 1283 aa2.96□□□□□ -1.94
PTPRC-208ENST00000427110 PRAMEF10O60809 474 aa2.96□□□□□ -1.94
PTPRC-208ENST00000427110 SUN1O94901 812 aa2.96□□□□□ -1.94
PTPRC-208ENST00000427110 IL18RAPO95256 599 aa2.96□□□□□ -1.94
PTPRC-208ENST00000427110 CHRM2P08172 466 aa2.96□□□□□ -1.94
PTPRC-208ENST00000427110 XRCC6P12956 609 aaKnown RBP eCLIP2.96□□□□□ -1.94
PTPRC-208ENST00000427110 ZNF37AP17032 561 aaPredicted RBP2.96□□□□□ -1.94
PTPRC-208ENST00000427110 ITGALP20701 1170 aa2.96□□□□□ -1.94
PTPRC-208ENST00000427110 TNFSF4P23510 183 aa2.96□□□□□ -1.94
PTPRC-208ENST00000427110 STT3AP46977 705 aa2.96□□□□□ -1.94
PTPRC-208ENST00000427110 SLC11A2P49281 568 aa2.96□□□□□ -1.94
PTPRC-208ENST00000427110 CASP5P51878 434 aa2.96□□□□□ -1.94
PTPRC-208ENST00000427110 BLOC1S1P78537 153 aa2.96□□□□□ -1.94
PTPRC-208ENST00000427110 FPGSQ05932 587 aa2.96□□□□□ -1.94
PTPRC-208ENST00000427110 IQCB1Q15051 598 aa2.96□□□□□ -1.94
PTPRC-208ENST00000427110 LONRF3Q496Y0 759 aa2.96□□□□□ -1.94
PTPRC-208ENST00000427110 DCAF12L1Q5VU92 463 aa2.96□□□□□ -1.94
PTPRC-208ENST00000427110 CLNKQ7Z7G1 428 aa2.96□□□□□ -1.94
PTPRC-208ENST00000427110 DPP9Q86TI2 863 aa2.96□□□□□ -1.94
PTPRC-208ENST00000427110 SKAP1Q86WV1 359 aa2.96□□□□□ -1.94
PTPRC-208ENST00000427110 PRIMA1Q86XR5 153 aa2.96□□□□□ -1.94
PTPRC-208ENST00000427110 ADGRG5Q8IZF4 528 aa2.96□□□□□ -1.94
PTPRC-208ENST00000427110 OR2C3Q8N628 320 aa2.96□□□□□ -1.94
PTPRC-208ENST00000427110 FAM98AQ8NCA5 519 aaKnown RBP2.96□□□□□ -1.94
PTPRC-208ENST00000427110 PSD4Q8NDX1 1056 aa2.96□□□□□ -1.94
PTPRC-208ENST00000427110 TOR1AIP2Q8NFQ8 470 aa2.96□□□□□ -1.94
PTPRC-208ENST00000427110 IPCEF1Q8WWN9 437 aaPredicted RBP2.96□□□□□ -1.94
PTPRC-208ENST00000427110 MAML1Q92585 1016 aa2.96□□□□□ -1.94
PTPRC-208ENST00000427110 SPSB4Q96A44 273 aa2.96□□□□□ -1.94
PTPRC-208ENST00000427110 NMD3Q96D46 503 aaKnown RBP2.96□□□□□ -1.94
PTPRC-208ENST00000427110 IQCDQ96DY2 449 aa2.96□□□□□ -1.94
PTPRC-208ENST00000427110 FBXL20Q96IG2 436 aa2.96□□□□□ -1.94
PTPRC-208ENST00000427110 MOGAT1Q96PD6 335 aa2.96□□□□□ -1.94
PTPRC-208ENST00000427110 MED15Q96RN5 788 aa2.96□□□□□ -1.94
PTPRC-208ENST00000427110 DUSP26Q9BV47 211 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms