RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 DNAJB2P25686 324 aa14.48□□□□□ -0.09
RPL28-202ENST00000426763 TRMT10CQ7L0Y3 403 aaKnown RBP14.48□□□□□ -0.09
RPL28-202ENST00000426763 CDK5RAP1Q96SZ6 601 aaKnown RBP14.48□□□□□ -0.09
RPL28-202ENST00000426763 SLC13A1Q9BZW2 595 aa14.48□□□□□ -0.09
RPL28-202ENST00000426763 SENP1Q9P0U3 644 aa14.48□□□□□ -0.09
RPL28-202ENST00000426763 MAFO75444 373 aaPredicted RBP14.48□□□□□ -0.09
RPL28-202ENST00000426763 ESRRBO95718 433 aa14.48□□□□□ -0.09
RPL28-202ENST00000426763 ETFBP38117 255 aa14.48□□□□□ -0.09
RPL28-202ENST00000426763 PTGER2P43116 358 aa14.48□□□□□ -0.09
RPL28-202ENST00000426763 KPNA1P52294 538 aaPredicted RBP14.48□□□□□ -0.09
RPL28-202ENST00000426763 MUM1Q2TAK8 710 aa14.48□□□□□ -0.09
RPL28-202ENST00000426763 NAPEPLDQ6IQ20 393 aa14.48□□□□□ -0.09
RPL28-202ENST00000426763 SLFN11Q7Z7L1 901 aa14.48□□□□□ -0.09
RPL28-202ENST00000426763 SLC47A2Q86VL8 602 aa14.48□□□□□ -0.09
RPL28-202ENST00000426763 JAMLQ86YT9 394 aa14.48□□□□□ -0.09
RPL28-202ENST00000426763 IL31RAQ8NI17 732 aa14.48□□□□□ -0.09
RPL28-202ENST00000426763 SNX19Q92543 992 aa14.48□□□□□ -0.09
RPL28-202ENST00000426763 APOBEC2Q9Y235 224 aaKnown RBP14.48□□□□□ -0.09
RPL28-202ENST00000426763 MRPS6P82932 125 aaKnown RBP14.48□□□□□ -0.09
RPL28-202ENST00000426763 PLD1Q13393 1074 aa14.48□□□□□ -0.09
RPL28-202ENST00000426763 E2F4Q16254 413 aa14.48□□□□□ -0.09
RPL28-202ENST00000426763 IPMKQ8NFU5 416 aa14.48□□□□□ -0.09
RPL28-202ENST00000426763 FAM172AQ8WUF8 416 aa14.48□□□□□ -0.09
RPL28-202ENST00000426763 TATDN2Q93075 761 aa14.48□□□□□ -0.09
RPL28-202ENST00000426763 CNPY3Q9BT09 278 aa14.48□□□□□ -0.09
RPL28-202ENST00000426763 FAM208AQ9UK61 1670 aaKnown RBP14.48□□□□□ -0.09
RPL28-202ENST00000426763 BTBD19C9JJ37 291 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 NDUFS3O75489 264 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 AKT1P31749 480 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 TKTL1P51854 596 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 NDST1P52848 882 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 GCNT1Q02742 428 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 FAM171A1Q5VUB5 890 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 ABRAQ8N0Z2 381 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 USP38Q8NB14 1042 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 CALML6Q8TD86 181 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 TSPAN17Q96FV3 270 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 SUDS3Q9H7L9 328 aaPredicted RBP14.47□□□□□ -0.09
RPL28-202ENST00000426763 CYP4F11Q9HBI6 524 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 CDY2AQ9Y6F7 541 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 PPP2R2AP63151 447 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 CLEC16AQ2KHT3 1053 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 SYTL3Q4VX76 610 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 FSCBQ5H9T9 825 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 UCMAQ8WVF2 138 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 PTPRN2Q92932 1015 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 TIMM13Q9Y5L4 95 aaPredicted RBP14.47□□□□□ -0.09
RPL28-202ENST00000426763 CASZ1Q86V15 1759 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 A0A0G2JND7 137 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 ONECUT3O60422 494 aaPredicted RBP14.47□□□□□ -0.09
RPL28-202ENST00000426763 DCTN3O75935 186 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 ANXA9O76027 345 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 ESRRAP11474 423 aaPredicted RBP14.47□□□□□ -0.09
RPL28-202ENST00000426763 GLRA2P23416 452 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 EFEMP1Q12805 493 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 THEMIS2Q5TEJ8 643 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 NUDCD3Q8IVD9 361 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 TTC30BQ8N4P2 665 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 ATXN7L3BQ96GX2 97 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 ZBTB45Q96K62 511 aaPredicted RBP14.47□□□□□ -0.09
RPL28-202ENST00000426763 Q9H521 79 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 VCX3AQ9NNX9 186 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 ARHGEF38Q9NXL2 777 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 NSMCE4AQ9NXX6 385 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 SPAG6O75602 509 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 SNHG28P0DPA3 235 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 GTF2A1P52655 376 aaPredicted RBP14.47□□□□□ -0.09
RPL28-202ENST00000426763 SLC13A5Q86YT5 568 aaPredicted RBP14.47□□□□□ -0.09
RPL28-202ENST00000426763 FGD4Q96M96 766 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 FAM118BQ9BPY3 351 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 MAF1Q9H063 256 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 FBXO44Q9H4M3 255 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 TLR8Q9NR97 1041 aaKnown RBP14.47□□□□□ -0.09
RPL28-202ENST00000426763 RBM12Q9NTZ6 932 aaKnown RBP14.47□□□□□ -0.09
RPL28-202ENST00000426763 SLC12A8A0AV02 714 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 ZNF197O14709 1029 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 STIP1P31948 543 aaKnown RBP14.47□□□□□ -0.09
RPL28-202ENST00000426763 SLC25A41Q8N5S1 370 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 SERPINI1Q99574 410 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 EFHD1Q9BUP0 239 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 TSR3Q9UJK0 312 aaKnown RBP14.47□□□□□ -0.09
RPL28-202ENST00000426763 CNTNAP2Q9UHC6 1331 aa14.47□□□□□ -0.09
RPL28-202ENST00000426763 TADA3O75528 432 aa14.46□□□□□ -0.09
RPL28-202ENST00000426763 RECQL4O94761 1208 aa14.46□□□□□ -0.09
RPL28-202ENST00000426763 ITGB5P18084 799 aa14.46□□□□□ -0.09
RPL28-202ENST00000426763 EIF4BP23588 611 aaKnown RBP14.46□□□□□ -0.09
RPL28-202ENST00000426763 AVPR1AP37288 418 aa14.46□□□□□ -0.09
RPL28-202ENST00000426763 LINC00523Q86TU6 105 aa14.46□□□□□ -0.09
RPL28-202ENST00000426763 USP13Q92995 863 aaPredicted RBP14.46□□□□□ -0.09
RPL28-202ENST00000426763 KLHL29Q96CT2 875 aa14.46□□□□□ -0.09
RPL28-202ENST00000426763 EMILIN2Q9BXX0 1053 aa14.46□□□□□ -0.09
RPL28-202ENST00000426763 FRMD8Q9BZ67 464 aaPredicted RBP14.46□□□□□ -0.09
RPL28-202ENST00000426763 GOLPH3Q9H4A6 298 aa14.46□□□□□ -0.09
RPL28-202ENST00000426763 LRRIQ3A6PVS8 624 aaPredicted RBP14.46□□□□□ -0.09
RPL28-202ENST00000426763 RALBP11234 206 aa14.46□□□□□ -0.09
RPL28-202ENST00000426763 SERPINB9P50453 376 aa14.46□□□□□ -0.09
RPL28-202ENST00000426763 PDAP1Q13442 181 aaKnown RBP14.46□□□□□ -0.09
RPL28-202ENST00000426763 ACSF2Q96CM8 615 aaPredicted RBP14.46□□□□□ -0.09
RPL28-202ENST00000426763 TNFSF13BQ9Y275 285 aa14.46□□□□□ -0.09
RPL28-202ENST00000426763 ANKRD63C9JTQ0 380 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms