RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 Q3C1V9 767 aa14.05□□□□□ -0.16
USP42-203ENST00000426246 FYB2Q5VWT5 728 aa14.05□□□□□ -0.16
USP42-203ENST00000426246 ANKRD22Q5VYY1 191 aa14.05□□□□□ -0.16
USP42-203ENST00000426246 ECHDC2Q86YB7 292 aa14.05□□□□□ -0.16
USP42-203ENST00000426246 DNERQ8NFT8 737 aa14.05□□□□□ -0.16
USP42-203ENST00000426246 ZNF302Q9NR11 478 aa14.05□□□□□ -0.16
USP42-203ENST00000426246 FAM49BQ9NUQ9 324 aa14.05□□□□□ -0.16
USP42-203ENST00000426246 NOP53Q9NZM5 478 aaKnown RBP14.05□□□□□ -0.16
USP42-203ENST00000426246 PROSCO94903 275 aa14.05□□□□□ -0.16
USP42-203ENST00000426246 TJP3O95049 919 aa14.05□□□□□ -0.16
USP42-203ENST00000426246 APRTP07741 180 aa14.05□□□□□ -0.16
USP42-203ENST00000426246 RFC1P35251 1148 aaPredicted RBP14.05□□□□□ -0.16
USP42-203ENST00000426246 ZNF699Q32M78 642 aa14.05□□□□□ -0.16
USP42-203ENST00000426246 CENPUQ71F23 418 aa14.05□□□□□ -0.16
USP42-203ENST00000426246 FEZF2Q8TBJ5 459 aa14.05□□□□□ -0.16
USP42-203ENST00000426246 SMYD3Q9H7B4 428 aa14.05□□□□□ -0.16
USP42-203ENST00000426246 ZNF395Q9H8N7 513 aaPredicted RBP14.05□□□□□ -0.16
USP42-203ENST00000426246 SOWAHBA6NEL2 793 aa14.05□□□□□ -0.16
USP42-203ENST00000426246 INHBAP08476 426 aa14.05□□□□□ -0.16
USP42-203ENST00000426246 GDF10P55107 478 aa14.05□□□□□ -0.16
USP42-203ENST00000426246 LY6KQ17RY6 165 aa14.05□□□□□ -0.16
USP42-203ENST00000426246 MAP1SQ66K74 1059 aaPredicted RBP14.05□□□□□ -0.16
USP42-203ENST00000426246 ZCCHC23Q6ZST2 131 aa14.05□□□□□ -0.16
USP42-203ENST00000426246 C4orf19Q8IY42 314 aa14.05□□□□□ -0.16
USP42-203ENST00000426246 EFCAB3Q8N7B9 438 aa14.05□□□□□ -0.16
USP42-203ENST00000426246 FBXO36Q8NEA4 188 aa14.05□□□□□ -0.16
USP42-203ENST00000426246 KDM4CQ9H3R0 1056 aa14.05□□□□□ -0.16
USP42-203ENST00000426246 NFASCO94856 1347 aa14.05□□□□□ -0.16
USP42-203ENST00000426246 KRT3P12035 628 aa14.04□□□□□ -0.16
USP42-203ENST00000426246 WDR4P57081 412 aaKnown RBP14.04□□□□□ -0.16
USP42-203ENST00000426246 KRT81Q14533 505 aa14.04□□□□□ -0.16
USP42-203ENST00000426246 FAM102AQ5T9C2 384 aaPredicted RBP14.04□□□□□ -0.16
USP42-203ENST00000426246 SH3PXD2AQ5TCZ1 1133 aa14.04□□□□□ -0.16
USP42-203ENST00000426246 PRPF31Q8WWY3 499 aaKnown RBP14.04□□□□□ -0.16
USP42-203ENST00000426246 MECRQ9BV79 373 aa14.04□□□□□ -0.16
USP42-203ENST00000426246 KIAA1586Q9HCI6 787 aa14.04□□□□□ -0.16
USP42-203ENST00000426246 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.04□□□□□ -0.16
USP42-203ENST00000426246 IL1RAPL1Q9NZN1 696 aa14.04□□□□□ -0.16
USP42-203ENST00000426246 SLC17A7Q9P2U7 560 aa14.04□□□□□ -0.16
USP42-203ENST00000426246 PACSIN3Q9UKS6 424 aa14.04□□□□□ -0.16
USP42-203ENST00000426246 UBE4BO95155 1302 aa14.04□□□□□ -0.16
USP42-203ENST00000426246 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.04□□□□□ -0.16
USP42-203ENST00000426246 ARHGAP42A6NI28 874 aa14.04□□□□□ -0.16
USP42-203ENST00000426246 CLCN3P51790 818 aa14.04□□□□□ -0.16
USP42-203ENST00000426246 CDH6P55285 790 aa14.04□□□□□ -0.16
USP42-203ENST00000426246 MS4A4AQ96JQ5 239 aa14.04□□□□□ -0.16
USP42-203ENST00000426246 TTC1Q99614 292 aa14.04□□□□□ -0.16
USP42-203ENST00000426246 ZNF408Q9H9D4 720 aa14.04□□□□□ -0.16
USP42-203ENST00000426246 CYP1A2P05177 515 aa14.04□□□□□ -0.16
USP42-203ENST00000426246 RBP3P10745 1247 aa14.04□□□□□ -0.16
USP42-203ENST00000426246 ICAM3P32942 547 aa14.04□□□□□ -0.16
USP42-203ENST00000426246 JAK3P52333 1124 aa14.04□□□□□ -0.16
USP42-203ENST00000426246 CRADDP78560 199 aa14.04□□□□□ -0.16
USP42-203ENST00000426246 ZNF568Q3ZCX4 644 aa14.04□□□□□ -0.16
USP42-203ENST00000426246 RAB6CQ53S08 254 aa14.04□□□□□ -0.16
USP42-203ENST00000426246 PDCD7Q8N8D1 485 aaKnown RBP14.04□□□□□ -0.16
USP42-203ENST00000426246 JOSD2Q8TAC2 188 aa14.04□□□□□ -0.16
USP42-203ENST00000426246 OSBPL1AQ9BXW6 950 aa14.04□□□□□ -0.16
USP42-203ENST00000426246 RAB6CQ9H0N0 254 aa14.04□□□□□ -0.16
USP42-203ENST00000426246 CYP4F11Q9HBI6 524 aa14.04□□□□□ -0.16
USP42-203ENST00000426246 XPNPEP1Q9NQW7 623 aa14.04□□□□□ -0.16
USP42-203ENST00000426246 PPARGC1AQ9UBK2 798 aaKnown RBP14.04□□□□□ -0.16
USP42-203ENST00000426246 ZMYND8Q9ULU4 1186 aaPredicted RBP14.04□□□□□ -0.16
USP42-203ENST00000426246 M0QYV0 167 aa14.03□□□□□ -0.16
USP42-203ENST00000426246 SOCS7O14512 581 aa14.03□□□□□ -0.16
USP42-203ENST00000426246 B4GALT5O43286 388 aa14.03□□□□□ -0.16
USP42-203ENST00000426246 TOM1L1O75674 476 aa14.03□□□□□ -0.16
USP42-203ENST00000426246 RNF8O76064 485 aa14.03□□□□□ -0.16
USP42-203ENST00000426246 SFNP31947 248 aa14.03□□□□□ -0.16
USP42-203ENST00000426246 ABCG1P45844 678 aa14.03□□□□□ -0.16
USP42-203ENST00000426246 CFAP61Q8NHU2 1237 aa14.03□□□□□ -0.16
USP42-203ENST00000426246 SPATA18Q8TC71 538 aa14.03□□□□□ -0.16
USP42-203ENST00000426246 TCP10LQ8TDR4 215 aa14.03□□□□□ -0.16
USP42-203ENST00000426246 FAF2Q96CS3 445 aa14.03□□□□□ -0.16
USP42-203ENST00000426246 SERPINB12Q96P63 405 aa14.03□□□□□ -0.16
USP42-203ENST00000426246 RAB6BQ9NRW1 208 aa14.03□□□□□ -0.16
USP42-203ENST00000426246 CISHQ9NSE2 258 aa14.03□□□□□ -0.16
USP42-203ENST00000426246 PARVAQ9NVD7 372 aa14.03□□□□□ -0.16
USP42-203ENST00000426246 XPO7Q9UIA9 1087 aaKnown RBP14.03□□□□□ -0.16
USP42-203ENST00000426246 MCM3APO60318 1980 aa14.03□□□□□ -0.16
USP42-203ENST00000426246 TCRBV7S3A2A0A539 114 aa14.03□□□□□ -0.16
USP42-203ENST00000426246 DGAT1O75907 488 aa14.03□□□□□ -0.16
USP42-203ENST00000426246 ENO1P06733 434 aaKnown RBP14.03□□□□□ -0.16
USP42-203ENST00000426246 ATP2A2P16615 1042 aaKnown RBP14.03□□□□□ -0.16
USP42-203ENST00000426246 BPIFB4P59827 614 aa14.03□□□□□ -0.16
USP42-203ENST00000426246 C15orf59Q2T9L4 293 aaPredicted RBP14.03□□□□□ -0.16
USP42-203ENST00000426246 MROH9Q5TGP6 573 aa14.03□□□□□ -0.16
USP42-203ENST00000426246 YTHDF3Q7Z739 585 aaKnown RBP14.03□□□□□ -0.16
USP42-203ENST00000426246 MAP4K3Q8IVH8 894 aa14.03□□□□□ -0.16
USP42-203ENST00000426246 HEY2Q9UBP5 337 aa14.03□□□□□ -0.16
USP42-203ENST00000426246 DNAJC25-GNG10A0A024R161 153 aa14.03□□□□□ -0.16
USP42-203ENST00000426246 UNCXA6NJT0 531 aa14.03□□□□□ -0.16
USP42-203ENST00000426246 FSCN2O14926 492 aa14.03□□□□□ -0.16
USP42-203ENST00000426246 MAPK13O15264 365 aa14.03□□□□□ -0.16
USP42-203ENST00000426246 BGNP21810 368 aa14.03□□□□□ -0.16
USP42-203ENST00000426246 ANXA13P27216 316 aa14.03□□□□□ -0.16
USP42-203ENST00000426246 EIF3EP60228 445 aaKnown RBP14.03□□□□□ -0.16
USP42-203ENST00000426246 PDIK1LQ8N165 341 aa14.03□□□□□ -0.16
USP42-203ENST00000426246 TMEM35BQ8NCS4 154 aa14.03□□□□□ -0.16
USP42-203ENST00000426246 RDM1Q8NG50 284 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms