RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 HMGXB4Q9UGU5 601 aa14.56□□□□□ -0.08
SNX3-204ENST00000426155 CDH9Q9ULB4 789 aa14.56□□□□□ -0.08
SNX3-204ENST00000426155 CA14Q9ULX7 337 aa14.56□□□□□ -0.08
SNX3-204ENST00000426155 CTNND2Q9UQB3 1225 aa14.56□□□□□ -0.08
SNX3-204ENST00000426155 PATJQ8NI35 1801 aa14.56□□□□□ -0.08
SNX3-204ENST00000426155 MYO16Q9Y6X6 1858 aa14.56□□□□□ -0.08
SNX3-204ENST00000426155 HELZP42694 1942 aaKnown RBP14.56□□□□□ -0.08
SNX3-204ENST00000426155 A8MXQ7 604 aa14.55□□□□□ -0.08
SNX3-204ENST00000426155 PPP1R3GB7ZBB8 358 aa14.55□□□□□ -0.08
SNX3-204ENST00000426155 IKBKBO14920 756 aa14.55□□□□□ -0.08
SNX3-204ENST00000426155 ASS1P00966 412 aaKnown RBP14.55□□□□□ -0.08
SNX3-204ENST00000426155 EPB41P11171 864 aaKnown RBP14.55□□□□□ -0.08
SNX3-204ENST00000426155 HMGA1P17096 107 aaKnown RBP14.55□□□□□ -0.08
SNX3-204ENST00000426155 CCNE1P24864 410 aa14.55□□□□□ -0.08
SNX3-204ENST00000426155 GNL1P36915 607 aaPredicted RBP14.55□□□□□ -0.08
SNX3-204ENST00000426155 VIPR2P41587 438 aa14.55□□□□□ -0.08
SNX3-204ENST00000426155 ASPAP45381 313 aa14.55□□□□□ -0.08
SNX3-204ENST00000426155 CACNA2D1P54289 1103 aa14.55□□□□□ -0.08
SNX3-204ENST00000426155 GPC5P78333 572 aa14.55□□□□□ -0.08
SNX3-204ENST00000426155 GRM2Q14416 872 aa14.55□□□□□ -0.08
SNX3-204ENST00000426155 DCAF17Q5H9S7 520 aaPredicted RBP14.55□□□□□ -0.08
SNX3-204ENST00000426155 BMP8AQ7Z5Y6 402 aa14.55□□□□□ -0.08
SNX3-204ENST00000426155 ITIH5Q86UX2 942 aa14.55□□□□□ -0.08
SNX3-204ENST00000426155 SCN4BQ8IWT1 228 aa14.55□□□□□ -0.08
SNX3-204ENST00000426155 LEMD2Q8NC56 503 aa14.55□□□□□ -0.08
SNX3-204ENST00000426155 ZSCAN18Q8TBC5 510 aaPredicted RBP14.55□□□□□ -0.08
SNX3-204ENST00000426155 PCED1BQ96HM7 432 aa14.55□□□□□ -0.08
SNX3-204ENST00000426155 ASB16Q96NS5 453 aa14.55□□□□□ -0.08
SNX3-204ENST00000426155 DUSP9Q99956 384 aaKnown RBP14.55□□□□□ -0.08
SNX3-204ENST00000426155 ATXN3LQ9H3M9 355 aa14.55□□□□□ -0.08
SNX3-204ENST00000426155 SLITRK6Q9H5Y7 841 aa14.55□□□□□ -0.08
SNX3-204ENST00000426155 TMEM30AQ9NV96 361 aa14.55□□□□□ -0.08
SNX3-204ENST00000426155 FBXL21Q9UKT6 434 aa14.55□□□□□ -0.08
SNX3-204ENST00000426155 MAGED2Q9UNF1 606 aaPredicted RBP14.55□□□□□ -0.08
SNX3-204ENST00000426155 ASB3Q9Y575 518 aa14.55□□□□□ -0.08
SNX3-204ENST00000426155 MIA3Q5JRA6 1907 aa14.54□□□□□ -0.08
SNX3-204ENST00000426155 KRBA1A5PL33 1030 aa14.54□□□□□ -0.08
SNX3-204ENST00000426155 CLDN5O00501 218 aa14.54□□□□□ -0.08
SNX3-204ENST00000426155 PSMA7O14818 248 aa14.54□□□□□ -0.08
SNX3-204ENST00000426155 MICAL2O94851 1124 aa14.54□□□□□ -0.08
SNX3-204ENST00000426155 PTPN1P18031 435 aaKnown RBP14.54□□□□□ -0.08
SNX3-204ENST00000426155 BDNFP23560 247 aa14.54□□□□□ -0.08
SNX3-204ENST00000426155 MXI1P50539 228 aa14.54□□□□□ -0.08
SNX3-204ENST00000426155 STX17P56962 302 aa14.54□□□□□ -0.08
SNX3-204ENST00000426155 FKBP3Q00688 224 aaKnown RBP14.54□□□□□ -0.08
SNX3-204ENST00000426155 LRRC63Q05C16 580 aa14.54□□□□□ -0.08
SNX3-204ENST00000426155 STIM1Q13586 685 aa14.54□□□□□ -0.08
SNX3-204ENST00000426155 SGSM1Q2NKQ1 1148 aa14.54□□□□□ -0.08
SNX3-204ENST00000426155 CFAP221Q4G0U5 840 aa14.54□□□□□ -0.08
SNX3-204ENST00000426155 TCERG1LQ5VWI1 586 aa14.54□□□□□ -0.08
SNX3-204ENST00000426155 CWF19L1Q69YN2 538 aaKnown RBP14.54□□□□□ -0.08
SNX3-204ENST00000426155 TMEM150AQ86TG1 271 aa14.54□□□□□ -0.08
SNX3-204ENST00000426155 SIX5Q8N196 739 aa14.54□□□□□ -0.08
SNX3-204ENST00000426155 FBXL6Q8N531 539 aa14.54□□□□□ -0.08
SNX3-204ENST00000426155 MYCBPAPQ8TBZ2 947 aa14.54□□□□□ -0.08
SNX3-204ENST00000426155 NELFBQ8WX92 580 aa14.54□□□□□ -0.08
SNX3-204ENST00000426155 SEMA4DQ92854 862 aa14.54□□□□□ -0.08
SNX3-204ENST00000426155 NXPE3Q969Y0 559 aa14.54□□□□□ -0.08
SNX3-204ENST00000426155 RSPRY1Q96DX4 576 aa14.54□□□□□ -0.08
SNX3-204ENST00000426155 TMEM8AQ9HCN3 771 aa14.54□□□□□ -0.08
SNX3-204ENST00000426155 ABCB6Q9NP58 842 aa14.54□□□□□ -0.08
SNX3-204ENST00000426155 MUC6Q6W4X9 2439 aa14.54□□□□□ -0.08
SNX3-204ENST00000426155 SLC38A8A6NNN8 435 aa14.53□□□□□ -0.08
SNX3-204ENST00000426155 SLC16A3O15427 465 aaKnown RBP14.53□□□□□ -0.08
SNX3-204ENST00000426155 ECI2O75521 394 aa14.53□□□□□ -0.08
SNX3-204ENST00000426155 TADA3O75528 432 aa14.53□□□□□ -0.08
SNX3-204ENST00000426155 PRAMEF12O95522 483 aa14.53□□□□□ -0.08
SNX3-204ENST00000426155 NPR3P17342 541 aa14.53□□□□□ -0.08
SNX3-204ENST00000426155 NOP14P78316 857 aaKnown RBP14.53□□□□□ -0.08
SNX3-204ENST00000426155 TAF12Q16514 161 aa14.53□□□□□ -0.08
SNX3-204ENST00000426155 CBWD6Q4V339 395 aa14.53□□□□□ -0.08
SNX3-204ENST00000426155 CBWD3Q5JTY5 395 aa14.53□□□□□ -0.08
SNX3-204ENST00000426155 CBWD5Q5RIA9 395 aa14.53□□□□□ -0.08
SNX3-204ENST00000426155 GPR158Q5T848 1215 aa14.53□□□□□ -0.08
SNX3-204ENST00000426155 TTI2Q6NXR4 508 aa14.53□□□□□ -0.08
SNX3-204ENST00000426155 VITQ6UXI7 678 aa14.53□□□□□ -0.08
SNX3-204ENST00000426155 C4orf50Q6ZRC1 276 aa14.53□□□□□ -0.08
SNX3-204ENST00000426155 SUGP1Q8IWZ8 645 aaKnown RBP14.53□□□□□ -0.08
SNX3-204ENST00000426155 B3GALNT2Q8NCR0 500 aa14.53□□□□□ -0.08
SNX3-204ENST00000426155 FLCNQ8NFG4 579 aa14.53□□□□□ -0.08
SNX3-204ENST00000426155 SMARCD2Q92925 531 aa14.53□□□□□ -0.08
SNX3-204ENST00000426155 DHTKD1Q96HY7 919 aaPredicted RBP14.53□□□□□ -0.08
SNX3-204ENST00000426155 FUBP3Q96I24 572 aaKnown RBP eCLIP14.53□□□□□ -0.08
SNX3-204ENST00000426155 TWNKQ96RR1 684 aa14.53□□□□□ -0.08
SNX3-204ENST00000426155 B3GNT5Q9BYG0 378 aa14.53□□□□□ -0.08
SNX3-204ENST00000426155 ZNF518BQ9C0D4 1074 aa14.53□□□□□ -0.08
SNX3-204ENST00000426155 SMG9Q9H0W8 520 aaKnown RBP14.53□□□□□ -0.08
SNX3-204ENST00000426155 MAGEC2Q9UBF1 373 aaPredicted RBP14.53□□□□□ -0.08
SNX3-204ENST00000426155 CD58P19256 250 aa14.52□□□□□ -0.09
SNX3-204ENST00000426155 NDST1P52848 882 aa14.52□□□□□ -0.09
SNX3-204ENST00000426155 USP46P62068 366 aa14.52□□□□□ -0.09
SNX3-204ENST00000426155 RPL10AP62906 217 aaKnown RBP14.52□□□□□ -0.09
SNX3-204ENST00000426155 KRT39Q6A163 491 aa14.52□□□□□ -0.09
SNX3-204ENST00000426155 ACOT1Q86TX2 421 aa14.52□□□□□ -0.09
SNX3-204ENST00000426155 TMEM105Q8N8V8 129 aa14.52□□□□□ -0.09
SNX3-204ENST00000426155 TAF4BQ92750 862 aa14.52□□□□□ -0.09
SNX3-204ENST00000426155 ELSPBP1Q96BH3 223 aa14.52□□□□□ -0.09
SNX3-204ENST00000426155 MFSD1Q9H3U5 465 aa14.52□□□□□ -0.09
SNX3-204ENST00000426155 CLSTN2Q9H4D0 955 aa14.52□□□□□ -0.09
SNX3-204ENST00000426155 ZFP14Q9HCL3 533 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms