RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 LY75O60449 1722 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 GYG2O15488 501 aa7.9□□□□□ -1.15
SMARCC1-202ENST00000425518 LPXNO60711 386 aa7.9□□□□□ -1.15
SMARCC1-202ENST00000425518 RGS20O76081 388 aa7.9□□□□□ -1.15
SMARCC1-202ENST00000425518 HAUS5O94927 633 aa7.9□□□□□ -1.15
SMARCC1-202ENST00000425518 ITGAVP06756 1048 aa7.9□□□□□ -1.15
SMARCC1-202ENST00000425518 CD48P09326 243 aa7.9□□□□□ -1.15
SMARCC1-202ENST00000425518 SERPINB3P29508 390 aa7.9□□□□□ -1.15
SMARCC1-202ENST00000425518 YWHAGP61981 247 aaKnown RBP eCLIP7.9□□□□□ -1.15
SMARCC1-202ENST00000425518 PIGHQ14442 188 aaPredicted RBP7.9□□□□□ -1.15
SMARCC1-202ENST00000425518 SLFN12LQ6IEE8 588 aa7.9□□□□□ -1.15
SMARCC1-202ENST00000425518 DRICH1Q6PGQ1 229 aaPredicted RBP7.9□□□□□ -1.15
SMARCC1-202ENST00000425518 UNC45BQ8IWX7 931 aa7.9□□□□□ -1.15
SMARCC1-202ENST00000425518 CTAGE3PQ8IX95 158 aa7.9□□□□□ -1.15
SMARCC1-202ENST00000425518 RDM1Q8NG50 284 aa7.9□□□□□ -1.15
SMARCC1-202ENST00000425518 TFAP2BQ92481 460 aa7.9□□□□□ -1.15
SMARCC1-202ENST00000425518 HSPH1Q92598 858 aa7.9□□□□□ -1.15
SMARCC1-202ENST00000425518 NKD2Q969F2 451 aaPredicted RBP7.9□□□□□ -1.15
SMARCC1-202ENST00000425518 GPRASP2Q96D09 838 aa7.9□□□□□ -1.15
SMARCC1-202ENST00000425518 PRR11Q96HE9 360 aaPredicted RBP7.9□□□□□ -1.15
SMARCC1-202ENST00000425518 CGRRF1Q99675 332 aa7.9□□□□□ -1.15
SMARCC1-202ENST00000425518 MIPEPQ99797 713 aa7.9□□□□□ -1.15
SMARCC1-202ENST00000425518 TSSK1BQ9BXA7 367 aa7.9□□□□□ -1.15
SMARCC1-202ENST00000425518 CADM1Q9BY67 442 aaKnown RBP7.9□□□□□ -1.15
SMARCC1-202ENST00000425518 CISHQ9NSE2 258 aa7.9□□□□□ -1.15
SMARCC1-202ENST00000425518 ZFATQ9P243 1243 aa7.9□□□□□ -1.15
SMARCC1-202ENST00000425518 ZNRF3Q9ULT6 936 aa7.9□□□□□ -1.15
SMARCC1-202ENST00000425518 LRRC37AA6NMS7 1700 aa7.9□□□□□ -1.15
SMARCC1-202ENST00000425518 UBR3Q6ZT12 1888 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 TTLL13PA6NNM8 815 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 VWA5AO00534 786 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 LDHAP00338 332 aaKnown RBP7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 KRT3P12035 628 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 BGNP21810 368 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 CPA2P48052 419 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 HIRAP54198 1017 aaPredicted RBP7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 CLDN10P78369 228 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 ZC3H18Q86VM9 953 aaKnown RBP7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 KCTD6Q8NC69 237 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 ARMC2Q8NEN0 867 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 JOSD2Q8TAC2 188 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 SLC35B2Q8TB61 432 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 NSUN6Q8TEA1 469 aaKnown RBP7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 DNAJC9Q8WXX5 260 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 SLC7A3Q8WY07 619 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 AKT1S1Q96B36 256 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 DDX56Q9NY93 547 aaKnown RBP7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 KANSL3Q9P2N6 904 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 LRRC42Q9Y546 428 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 WNT10BO00744 389 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 EDN1P05305 212 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 IL1R2P27930 398 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 SLC18A1P54219 525 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 PSMC1P62191 440 aaKnown RBP7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 TSNAXIP1Q2TAA8 658 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 KLHL38Q2WGJ6 581 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 WASHC2DQ5SRD0 308 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 LRRC38Q5VT99 294 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 ANO7Q6IWH7 933 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 PCGF5Q86SE9 256 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 WDTC1Q8N5D0 677 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 ZNF526Q8TF50 670 aaPredicted RBP7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 GMLQ99445 158 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 ARMCX1Q9P291 453 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 CORO1CQ9ULV4 474 aaPredicted RBP7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 SNCAIPQ9Y6H5 919 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 A0A0B4J269 797 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 CCDC189A1A4V9 331 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 DPPA5A6NC42 116 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 CCDC22O60826 627 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 TMEM63AO94886 807 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 INHBAP08476 426 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 KRT19P08727 400 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 SRGAP2CP0DJJ0 459 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 PYGBP11216 843 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 ESRRAP11474 423 aaPredicted RBP7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 ELK3P41970 407 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 CCNG1P51959 295 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 EIF3EP60228 445 aaKnown RBP7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 FAAP100Q0VG06 881 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 KPNB1Q14974 876 aaKnown RBP7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 RCN1Q15293 331 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 TAF5Q15542 800 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 HADHQ16836 314 aaKnown RBP7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 TMEM132AQ24JP5 1023 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 DENND1BQ6P3S1 775 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 ADGRD1Q6QNK2 874 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 ABHD15Q6UXT9 468 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 C4orf50Q6ZRC1 276 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 CDR2LQ86X02 465 aaPredicted RBP7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 IGDCC3Q8IVU1 814 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 NSL1Q96IY1 281 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 TMEM120AQ9BXJ8 343 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 ACSS3Q9H6R3 686 aa7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 MAP3K20Q9NYL2 800 aaKnown RBP7.89□□□□□ -1.15
SMARCC1-202ENST00000425518 AVILO75366 819 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 KRT36O76013 467 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 RBP3P10745 1247 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 RTP1P59025 263 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 SP2Q02086 613 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms