RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 SV2CQ496J9 727 aa13.94□□□□□ -0.18
VRK3-203ENST00000424804 ARHGAP15Q53QZ3 475 aa13.94□□□□□ -0.18
VRK3-203ENST00000424804 DGKKQ5KSL6 1271 aa13.94□□□□□ -0.18
VRK3-203ENST00000424804 FAM26FQ5R3K3 315 aa13.94□□□□□ -0.18
VRK3-203ENST00000424804 UNC13DQ70J99 1090 aa13.94□□□□□ -0.18
VRK3-203ENST00000424804 METTL23Q86XA0 190 aa13.94□□□□□ -0.18
VRK3-203ENST00000424804 GPR161Q8N6U8 529 aaKnown RBP13.94□□□□□ -0.18
VRK3-203ENST00000424804 C7orf25Q9BPX7 421 aa13.94□□□□□ -0.18
VRK3-203ENST00000424804 ACBD6Q9BR61 282 aa13.94□□□□□ -0.18
VRK3-203ENST00000424804 PI4K2AQ9BTU6 479 aa13.94□□□□□ -0.18
VRK3-203ENST00000424804 PCIF1Q9H4Z3 704 aa13.94□□□□□ -0.18
VRK3-203ENST00000424804 FBRSL1Q9HCM7 1045 aaKnown RBP13.94□□□□□ -0.18
VRK3-203ENST00000424804 PDE11AQ9HCR9 933 aa13.94□□□□□ -0.18
VRK3-203ENST00000424804 GDAP2Q9NXN4 497 aa13.94□□□□□ -0.18
VRK3-203ENST00000424804 ABI2Q9NYB9 513 aaPredicted RBP13.94□□□□□ -0.18
VRK3-203ENST00000424804 PCDHB5Q9Y5E4 795 aa13.94□□□□□ -0.18
VRK3-203ENST00000424804 SPAG17Q6Q759 2223 aa13.94□□□□□ -0.18
VRK3-203ENST00000424804 PTPRDP23468 1912 aa13.94□□□□□ -0.18
VRK3-203ENST00000424804 ACTN4O43707 911 aaKnown RBP13.93□□□□□ -0.18
VRK3-203ENST00000424804 SLFN14P0C7P3 912 aa13.93□□□□□ -0.18
VRK3-203ENST00000424804 ACAT1P24752 427 aaKnown RBP13.93□□□□□ -0.18
VRK3-203ENST00000424804 CYP2F1P24903 491 aa13.93□□□□□ -0.18
VRK3-203ENST00000424804 DDR2Q16832 855 aa13.93□□□□□ -0.18
VRK3-203ENST00000424804 SOWAHAQ2M3V2 549 aa13.93□□□□□ -0.18
VRK3-203ENST00000424804 NAIF1Q69YI7 327 aaPredicted RBP13.93□□□□□ -0.18
VRK3-203ENST00000424804 TXNDC8Q6A555 127 aa13.93□□□□□ -0.18
VRK3-203ENST00000424804 TRIM68Q6AZZ1 485 aa13.93□□□□□ -0.18
VRK3-203ENST00000424804 FSTL4Q6MZW2 842 aa13.93□□□□□ -0.18
VRK3-203ENST00000424804 C1orf228Q6PIY5 440 aa13.93□□□□□ -0.18
VRK3-203ENST00000424804 MON1AQ86VX9 555 aa13.93□□□□□ -0.18
VRK3-203ENST00000424804 NELFCDQ8IXH7 590 aa13.93□□□□□ -0.18
VRK3-203ENST00000424804 DCP1BQ8IZD4 617 aaKnown RBP13.93□□□□□ -0.18
VRK3-203ENST00000424804 LRRC52Q8N7C0 313 aa13.93□□□□□ -0.18
VRK3-203ENST00000424804 MAB21L3Q8N8X9 362 aa13.93□□□□□ -0.18
VRK3-203ENST00000424804 FAM200AQ8TCP9 573 aa13.93□□□□□ -0.18
VRK3-203ENST00000424804 PAGE5Q96GU1 130 aa13.93□□□□□ -0.18
VRK3-203ENST00000424804 MYRFLQ96LU7 910 aa13.93□□□□□ -0.18
VRK3-203ENST00000424804 SLC22A12Q96S37 553 aa13.93□□□□□ -0.18
VRK3-203ENST00000424804 TMEM206Q9H813 350 aa13.93□□□□□ -0.18
VRK3-203ENST00000424804 SLC39A2Q9NP94 309 aa13.93□□□□□ -0.18
VRK3-203ENST00000424804 MYO16Q9Y6X6 1858 aa13.93□□□□□ -0.18
VRK3-203ENST00000424804 SOBPA7XYQ1 873 aa13.92□□□□□ -0.18
VRK3-203ENST00000424804 DPYSL4O14531 572 aa13.92□□□□□ -0.18
VRK3-203ENST00000424804 EXTL3O43909 919 aa13.92□□□□□ -0.18
VRK3-203ENST00000424804 NOL4O94818 638 aa13.92□□□□□ -0.18
VRK3-203ENST00000424804 LDHAP00338 332 aaKnown RBP13.92□□□□□ -0.18
VRK3-203ENST00000424804 PNPLA4P41247 253 aa13.92□□□□□ -0.18
VRK3-203ENST00000424804 TFAMQ00059 246 aaKnown RBP13.92□□□□□ -0.18
VRK3-203ENST00000424804 PLCB2Q00722 1185 aa13.92□□□□□ -0.18
VRK3-203ENST00000424804 LRRC32Q14392 662 aa13.92□□□□□ -0.18
VRK3-203ENST00000424804 VEPH1Q14D04 833 aa13.92□□□□□ -0.18
VRK3-203ENST00000424804 ITPRIPL2Q3MIP1 535 aa13.92□□□□□ -0.18
VRK3-203ENST00000424804 TMEM196Q5HYL7 178 aa13.92□□□□□ -0.18
VRK3-203ENST00000424804 INTS6LQ5JSJ4 861 aaKnown RBP13.92□□□□□ -0.18
VRK3-203ENST00000424804 LAIR1Q6GTX8 287 aa13.92□□□□□ -0.18
VRK3-203ENST00000424804 FAM171BQ6P995 826 aa13.92□□□□□ -0.18
VRK3-203ENST00000424804 CSGALNACT2Q8N6G5 542 aa13.92□□□□□ -0.18
VRK3-203ENST00000424804 OR5B17Q8NGF7 314 aa13.92□□□□□ -0.18
VRK3-203ENST00000424804 KBTBD7Q8WVZ9 684 aa13.92□□□□□ -0.18
VRK3-203ENST00000424804 EZH1Q92800 747 aaPredicted RBP13.92□□□□□ -0.18
VRK3-203ENST00000424804 ZNF560Q96MR9 790 aa13.92□□□□□ -0.18
VRK3-203ENST00000424804 GOLPH3LQ9H4A5 285 aa13.92□□□□□ -0.18
VRK3-203ENST00000424804 EXOC1Q9NV70 894 aa13.92□□□□□ -0.18
VRK3-203ENST00000424804 POLR3BQ9NW08 1133 aaPredicted RBP13.92□□□□□ -0.18
VRK3-203ENST00000424804 DDX43Q9NXZ2 648 aaKnown RBP13.92□□□□□ -0.18
VRK3-203ENST00000424804 RBAKQ9NYW8 714 aaPredicted RBP13.92□□□□□ -0.18
VRK3-203ENST00000424804 GTF3C4Q9UKN8 822 aa13.92□□□□□ -0.18
VRK3-203ENST00000424804 NME7Q9Y5B8 376 aa13.92□□□□□ -0.18
VRK3-203ENST00000424804 KIAA1549LQ6ZVL6 1849 aa13.92□□□□□ -0.18
VRK3-203ENST00000424804 TRDMT1O14717 391 aaKnown RBP13.91□□□□□ -0.18
VRK3-203ENST00000424804 ATP2C2O75185 946 aa13.91□□□□□ -0.18
VRK3-203ENST00000424804 PRPF40AO75400 957 aaKnown RBP13.91□□□□□ -0.18
VRK3-203ENST00000424804 RETP07949 1114 aa13.91□□□□□ -0.18
VRK3-203ENST00000424804 ARSAP15289 507 aa13.91□□□□□ -0.18
VRK3-203ENST00000424804 LMO2P25791 158 aa13.91□□□□□ -0.18
VRK3-203ENST00000424804 DDX6P26196 483 aaKnown RBP eCLIP13.91□□□□□ -0.18
VRK3-203ENST00000424804 SPEM2Q0P670 501 aa13.91□□□□□ -0.18
VRK3-203ENST00000424804 RUNX3Q13761 415 aa13.91□□□□□ -0.18
VRK3-203ENST00000424804 ZNF268Q14587 947 aaPredicted RBP13.91□□□□□ -0.18
VRK3-203ENST00000424804 LMBRD2Q68DH5 695 aaPredicted RBP13.91□□□□□ -0.18
VRK3-203ENST00000424804 EPM2AIP1Q7L775 607 aaPredicted RBP13.91□□□□□ -0.18
VRK3-203ENST00000424804 WDR5BQ86VZ2 330 aa13.91□□□□□ -0.18
VRK3-203ENST00000424804 LONP2Q86WA8 852 aa13.91□□□□□ -0.18
VRK3-203ENST00000424804 TMEM86AQ8N2M4 240 aa13.91□□□□□ -0.18
VRK3-203ENST00000424804 SYNPOQ8N3V7 929 aa13.91□□□□□ -0.18
VRK3-203ENST00000424804 TRMT2BQ96GJ1 504 aaKnown RBP13.91□□□□□ -0.18
VRK3-203ENST00000424804 CYP2S1Q96SQ9 504 aa13.91□□□□□ -0.18
VRK3-203ENST00000424804 MTMR12Q9C0I1 747 aa13.91□□□□□ -0.18
VRK3-203ENST00000424804 GZF1Q9H116 711 aaPredicted RBP13.91□□□□□ -0.18
VRK3-203ENST00000424804 ABCB6Q9NP58 842 aa13.91□□□□□ -0.18
VRK3-203ENST00000424804 TDP1Q9NUW8 608 aa13.91□□□□□ -0.18
VRK3-203ENST00000424804 INTS13Q9NVM9 706 aa13.91□□□□□ -0.18
VRK3-203ENST00000424804 GCNT4Q9P109 453 aa13.91□□□□□ -0.18
VRK3-203ENST00000424804 USP25Q9UHP3 1055 aa13.91□□□□□ -0.18
VRK3-203ENST00000424804 ITGA11Q9UKX5 1188 aa13.91□□□□□ -0.18
VRK3-203ENST00000424804 HPSEQ9Y251 543 aa13.91□□□□□ -0.18
VRK3-203ENST00000424804 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.91□□□□□ -0.18
VRK3-203ENST00000424804 CNOT1A5YKK6 2376 aaKnown RBP13.9□□□□□ -0.18
VRK3-203ENST00000424804 A0A1W2PQ27 194 aa13.9□□□□□ -0.18
VRK3-203ENST00000424804 A0A1W2PQ64 194 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms