RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 SNAPC2Q13487 334 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 ACVR2BQ13705 512 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 EIF4A2Q14240 407 aaKnown RBP4.07□□□□□ -1.76
SF3B1-205ENST00000424674 MMEL1Q495T6 779 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 BTBD8Q5XKL5 378 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 ACAD10Q6JQN1 1059 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 ZNF585AQ6P3V2 769 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 ALKBH5Q6P6C2 394 aaKnown RBP4.07□□□□□ -1.76
SF3B1-205ENST00000424674 CRTC1Q6UUV9 634 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 FAM47EQ6ZV65 393 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 MOGAT3Q86VF5 341 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 ZZZ3Q8IYH5 903 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 TRMT2AQ8IZ69 625 aaKnown RBP4.07□□□□□ -1.76
SF3B1-205ENST00000424674 NLGN4XQ8N0W4 816 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 TXLNBQ8N3L3 684 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 LRRC71Q8N4P6 559 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 RNF152Q8N8N0 203 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 SPC24Q8NBT2 197 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 OR10H5Q8NGA6 315 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 CEP70Q8NHQ1 597 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 GOT1L1Q8NHS2 421 aaPredicted RBP4.07□□□□□ -1.76
SF3B1-205ENST00000424674 PPP1R14CQ8TAE6 165 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 KLHDC4Q8TBB5 520 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 SH3RF3Q8TEJ3 882 aaPredicted RBP4.07□□□□□ -1.76
SF3B1-205ENST00000424674 TGFBRAP1Q8WUH2 860 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 ZUFSPQ96AP4 578 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 BICD1Q96G01 975 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 PIGSQ96S52 555 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 C7orf25Q9BPX7 421 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 TACO1Q9BSH4 297 aaKnown RBP4.07□□□□□ -1.76
SF3B1-205ENST00000424674 HGH1Q9BTY7 390 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 AGXT2Q9BYV1 514 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 KATNBL1Q9H079 304 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 SIL1Q9H173 461 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 SEC61A2Q9H9S3 476 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 SLC39A2Q9NP94 309 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 SAYSD1Q9NPB0 183 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 TM7SF3Q9NS93 570 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 RIC8BQ9NVN3 520 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 INTS10Q9NVR2 710 aaKnown RBP4.07□□□□□ -1.76
SF3B1-205ENST00000424674 DKK3Q9UBP4 350 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 ADD3Q9UEY8 706 aaKnown RBP4.07□□□□□ -1.76
SF3B1-205ENST00000424674 SERPINB13Q9UIV8 391 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 MOSPD1Q9UJG1 213 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 TUBD1Q9UJT1 453 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 SLC39A10Q9ULF5 831 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 TCAF1Q9Y4C2 921 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 hCG_1807616A0A1W2PRN6 198 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 MAN2B1O00754 1011 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 WNT9AO14904 365 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 MUSKO15146 869 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 SLC7A4O43246 635 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 PTP4A3O75365 173 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 USP1O94782 785 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 GUCA1CO95843 209 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 IL18BPO95998 194 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 CYP17A1P05093 508 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 QDPRP09417 244 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 NR2F1P10589 423 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 C6P13671 934 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 OSMP13725 252 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 PTPN1P18031 435 aaKnown RBP4.06□□□□□ -1.76
SF3B1-205ENST00000424674 CD40P25942 277 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 RAB1AP62820 205 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 AKAP17AQ02040 695 aaKnown RBP4.06□□□□□ -1.76
SF3B1-205ENST00000424674 ADCY2Q08462 1091 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 DBPQ10586 325 aaPredicted RBP4.06□□□□□ -1.76
SF3B1-205ENST00000424674 CHAF1BQ13112 559 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 USP10Q14694 798 aaKnown RBP4.06□□□□□ -1.76
SF3B1-205ENST00000424674 PDCD1Q15116 288 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 DLGAP5Q15398 846 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 SEC23AQ15436 765 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 GPR19Q15760 415 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 SMAD1Q15797 465 aaKnown RBP4.06□□□□□ -1.76
SF3B1-205ENST00000424674 FSCN1Q16658 493 aaKnown RBP4.06□□□□□ -1.76
SF3B1-205ENST00000424674 TSTQ16762 297 aaKnown RBP4.06□□□□□ -1.76
SF3B1-205ENST00000424674 TIGD6Q17RP2 521 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 ZNF568Q3ZCX4 644 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 CCDC157Q569K6 752 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 MUM1L1Q5H9M0 696 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 FIGNQ5HY92 759 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 TOR2AQ5JU69 321 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 THEMIS2Q5TEJ8 643 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 KAZNQ674X7 775 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 IRGCQ6NXR0 463 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 IL27RAQ6UWB1 636 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 BTNL9Q6UXG8 535 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 ZNF783Q6ZMS7 281 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 TMTC3Q6ZXV5 915 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 SPRED1Q7Z699 444 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 DNAJB7Q7Z6W7 309 aaPredicted RBP4.06□□□□□ -1.76
SF3B1-205ENST00000424674 PALM2Q8IXS6 379 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 CCDC170Q8IYT3 715 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 NGEFQ8N5V2 710 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 TMCO5AQ8N6Q1 288 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 FAM71BQ8TC56 605 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 UTP15Q8TED0 518 aaKnown RBP4.06□□□□□ -1.76
SF3B1-205ENST00000424674 CREB3L4Q8TEY5 395 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 GIMAP1Q8WWP7 306 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 ST8SIA4Q92187 359 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms