RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 SPATA2LQ8IUW3 424 aaPredicted RBP18.06■□□□□ 0.48
COL7A1-202ENST00000422991 FUKQ8N0W3 1084 aa18.06■□□□□ 0.48
COL7A1-202ENST00000422991 TTC9BQ8N6N2 239 aa18.06■□□□□ 0.48
COL7A1-202ENST00000422991 SPPL2BQ8TCT7 592 aa18.06■□□□□ 0.48
COL7A1-202ENST00000422991 HDAC7Q8WUI4 952 aa18.06■□□□□ 0.48
COL7A1-202ENST00000422991 BAP1Q92560 729 aa18.06■□□□□ 0.48
COL7A1-202ENST00000422991 IQCDQ96DY2 449 aa18.06■□□□□ 0.48
COL7A1-202ENST00000422991 MRFAP1L1Q96HT8 127 aa18.06■□□□□ 0.48
COL7A1-202ENST00000422991 HEXIM2Q96MH2 286 aaKnown RBP18.06■□□□□ 0.48
COL7A1-202ENST00000422991 SPAG5Q96R06 1193 aa18.06■□□□□ 0.48
COL7A1-202ENST00000422991 NUP58Q9BVL2 599 aa18.06■□□□□ 0.48
COL7A1-202ENST00000422991 B3GNT5Q9BYG0 378 aa18.06■□□□□ 0.48
COL7A1-202ENST00000422991 RHOBTB2Q9BYZ6 727 aa18.06■□□□□ 0.48
COL7A1-202ENST00000422991 EDEM3Q9BZQ6 932 aa18.06■□□□□ 0.48
COL7A1-202ENST00000422991 PLEKHA4Q9H4M7 779 aa18.06■□□□□ 0.48
COL7A1-202ENST00000422991 PRDM6Q9NQX0 595 aa18.06■□□□□ 0.48
COL7A1-202ENST00000422991 HSFX1Q9UBD0 423 aa18.06■□□□□ 0.48
COL7A1-202ENST00000422991 ATP8B3O60423 1300 aa18.05■□□□□ 0.48
COL7A1-202ENST00000422991 A0A1W2PQJ5 194 aa18.05■□□□□ 0.48
COL7A1-202ENST00000422991 NCK2O43639 380 aa18.05■□□□□ 0.48
COL7A1-202ENST00000422991 MAGEA11P43364 429 aa18.05■□□□□ 0.48
COL7A1-202ENST00000422991 ADAM15Q13444 863 aa18.05■□□□□ 0.48
COL7A1-202ENST00000422991 CTC1Q2NKJ3 1217 aa18.05■□□□□ 0.48
COL7A1-202ENST00000422991 SGO2Q562F6 1265 aa18.05■□□□□ 0.48
COL7A1-202ENST00000422991 LIN9Q5TKA1 542 aa18.05■□□□□ 0.48
COL7A1-202ENST00000422991 TMEM184AQ6ZMB5 413 aa18.05■□□□□ 0.48
COL7A1-202ENST00000422991 PAQR9Q6ZVX9 377 aa18.05■□□□□ 0.48
COL7A1-202ENST00000422991 FAM35AQ86V20 835 aa18.05■□□□□ 0.48
COL7A1-202ENST00000422991 SLC2A14Q8TDB8 520 aa18.05■□□□□ 0.48
COL7A1-202ENST00000422991 ATXN2LQ8WWM7 1075 aaKnown RBP18.05■□□□□ 0.48
COL7A1-202ENST00000422991 CASP10Q92851 521 aa18.05■□□□□ 0.48
COL7A1-202ENST00000422991 ZNF518BQ9C0D4 1074 aa18.05■□□□□ 0.48
COL7A1-202ENST00000422991 CYP4F11Q9HBI6 524 aa18.05■□□□□ 0.48
COL7A1-202ENST00000422991 DZANK1Q9NVP4 752 aa18.05■□□□□ 0.48
COL7A1-202ENST00000422991 DPP7Q9UHL4 492 aa18.05■□□□□ 0.48
COL7A1-202ENST00000422991 KIAA1257Q9ULG3 409 aa18.05■□□□□ 0.48
COL7A1-202ENST00000422991 MYO6Q9UM54 1294 aa18.05■□□□□ 0.48
COL7A1-202ENST00000422991 XIRP2A4UGR9 3374 aa18.05■□□□□ 0.48
COL7A1-202ENST00000422991 MYH10P35580 1976 aa18.04■□□□□ 0.48
COL7A1-202ENST00000422991 GOLGA6L3A6NEY3 463 aa18.04■□□□□ 0.48
COL7A1-202ENST00000422991 CLDN5O00501 218 aa18.04■□□□□ 0.48
COL7A1-202ENST00000422991 PRRG1O14668 218 aa18.04■□□□□ 0.48
COL7A1-202ENST00000422991 CYP26A1O43174 497 aa18.04■□□□□ 0.48
COL7A1-202ENST00000422991 CALCAP01258 141 aa18.04■□□□□ 0.48
COL7A1-202ENST00000422991 GYPCP04921 128 aa18.04■□□□□ 0.48
COL7A1-202ENST00000422991 C8AP07357 584 aa18.04■□□□□ 0.48
COL7A1-202ENST00000422991 HAPLN1P10915 354 aaPredicted RBP18.04■□□□□ 0.48
COL7A1-202ENST00000422991 VDRP11473 427 aa18.04■□□□□ 0.48
COL7A1-202ENST00000422991 CD19P15391 556 aa18.04■□□□□ 0.48
COL7A1-202ENST00000422991 BRD2P25440 801 aaKnown RBP18.04■□□□□ 0.48
COL7A1-202ENST00000422991 ELF1P32519 619 aa18.04■□□□□ 0.48
COL7A1-202ENST00000422991 CLCN1P35523 988 aa18.04■□□□□ 0.48
COL7A1-202ENST00000422991 SOX5P35711 763 aa18.04■□□□□ 0.48
COL7A1-202ENST00000422991 STAT1P42224 750 aa18.04■□□□□ 0.48
COL7A1-202ENST00000422991 DUSP4Q13115 394 aa18.04■□□□□ 0.48
COL7A1-202ENST00000422991 SKIV2LQ15477 1246 aaKnown RBP18.04■□□□□ 0.48
COL7A1-202ENST00000422991 PPP1R26Q5T8A7 1209 aaPredicted RBP18.04■□□□□ 0.48
COL7A1-202ENST00000422991 ARHGAP17Q68EM7 881 aa18.04■□□□□ 0.48
COL7A1-202ENST00000422991 ELMSAN1Q6PJG2 1045 aa18.04■□□□□ 0.48
COL7A1-202ENST00000422991 CCDC149Q6ZUS6 474 aa18.04■□□□□ 0.48
COL7A1-202ENST00000422991 RTL10Q7L3V2 364 aa18.04■□□□□ 0.48
COL7A1-202ENST00000422991 SLC7A14Q8TBB6 771 aa18.04■□□□□ 0.48
COL7A1-202ENST00000422991 TFAP2BQ92481 460 aa18.04■□□□□ 0.48
COL7A1-202ENST00000422991 CYFIP2Q96F07 1278 aa18.04■□□□□ 0.48
COL7A1-202ENST00000422991 HNRNPABQ99729 332 aaKnown RBP18.04■□□□□ 0.48
COL7A1-202ENST00000422991 ZSWIM1Q9BR11 485 aa18.04■□□□□ 0.48
COL7A1-202ENST00000422991 ACP6Q9NPH0 428 aa18.04■□□□□ 0.48
COL7A1-202ENST00000422991 YIPF1Q9Y548 306 aa18.04■□□□□ 0.48
COL7A1-202ENST00000422991 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.04■□□□□ 0.48
COL7A1-202ENST00000422991 INSL5Q9Y5Q6 135 aa18.04■□□□□ 0.48
COL7A1-202ENST00000422991 O00370 1275 aa18.03■□□□□ 0.48
COL7A1-202ENST00000422991 TBX10O75333 385 aa18.03■□□□□ 0.48
COL7A1-202ENST00000422991 SRGAP2BP0DMP2 458 aa18.03■□□□□ 0.48
COL7A1-202ENST00000422991 BDNFP23560 247 aa18.03■□□□□ 0.48
COL7A1-202ENST00000422991 CYP2F1P24903 491 aa18.03■□□□□ 0.48
COL7A1-202ENST00000422991 ADORA2BP29275 332 aa18.03■□□□□ 0.48
COL7A1-202ENST00000422991 GNA15P30679 374 aa18.03■□□□□ 0.48
COL7A1-202ENST00000422991 TRIM14Q14142 442 aa18.03■□□□□ 0.48
COL7A1-202ENST00000422991 PABPC5Q96DU9 382 aaKnown RBP18.03■□□□□ 0.48
COL7A1-202ENST00000422991 SMARCD1Q96GM5 515 aa18.03■□□□□ 0.48
COL7A1-202ENST00000422991 SEPT5Q99719 369 aaPredicted RBP18.03■□□□□ 0.48
COL7A1-202ENST00000422991 MED10Q9BTT4 135 aa18.03■□□□□ 0.48
COL7A1-202ENST00000422991 GRPEL1Q9HAV7 217 aa18.03■□□□□ 0.48
COL7A1-202ENST00000422991 KRT82Q9NSB4 513 aa18.03■□□□□ 0.48
COL7A1-202ENST00000422991 TMEM30AQ9NV96 361 aa18.03■□□□□ 0.48
COL7A1-202ENST00000422991 CLDND1Q9NY35 253 aa18.03■□□□□ 0.48
COL7A1-202ENST00000422991 CAPN11Q9UMQ6 739 aa18.03■□□□□ 0.48
COL7A1-202ENST00000422991 SLC27A5Q9Y2P5 690 aa18.03■□□□□ 0.48
COL7A1-202ENST00000422991 CUL9Q8IWT3 2517 aa18.03■□□□□ 0.48
COL7A1-202ENST00000422991 LRRC53A6NM62 1247 aa18.02■□□□□ 0.48
COL7A1-202ENST00000422991 ZMYND10O75800 440 aa18.02■□□□□ 0.48
COL7A1-202ENST00000422991 SOAT2O75908 522 aa18.02■□□□□ 0.48
COL7A1-202ENST00000422991 GFPT2O94808 682 aa18.02■□□□□ 0.48
COL7A1-202ENST00000422991 HOXA9P31269 272 aa18.02■□□□□ 0.48
COL7A1-202ENST00000422991 TUFMP49411 452 aaKnown RBP18.02■□□□□ 0.48
COL7A1-202ENST00000422991 CACNA2D1P54289 1103 aa18.02■□□□□ 0.48
COL7A1-202ENST00000422991 BPIFB4P59827 614 aa18.02■□□□□ 0.48
COL7A1-202ENST00000422991 MRPS5P82675 430 aaKnown RBP18.02■□□□□ 0.48
COL7A1-202ENST00000422991 PTK2Q05397 1052 aa18.02■□□□□ 0.48
COL7A1-202ENST00000422991 MGAT5BQ3V5L5 792 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms