RNA–Protein interactions for RNA: ENST00000422875.5

TRAPPC10-203, Transcript of trafficking protein particle complex 10, humanhuman

TSL 1 (best)

Gene TRAPPC10, Length 5,267 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-203ENST00000422875 MTMR12Q9C0I1 747 aa18.23■□□□□ 0.51
TRAPPC10-203ENST00000422875 VPS33BQ9H267 617 aa18.23■□□□□ 0.51
TRAPPC10-203ENST00000422875 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.23■□□□□ 0.51
TRAPPC10-203ENST00000422875 ARMCX1Q9P291 453 aa18.23■□□□□ 0.51
TRAPPC10-203ENST00000422875 GLRBP48167 497 aa18.22■□□□□ 0.51
TRAPPC10-203ENST00000422875 TATDN2Q93075 761 aa18.22■□□□□ 0.51
TRAPPC10-203ENST00000422875 CTNNAL1Q9UBT7 734 aa18.22■□□□□ 0.51
TRAPPC10-203ENST00000422875 SIK3Q9Y2K2 1263 aa18.22■□□□□ 0.51
TRAPPC10-203ENST00000422875 PDAP1Q13442 181 aaKnown RBP18.22■□□□□ 0.51
TRAPPC10-203ENST00000422875 TRADDQ15628 312 aa18.22■□□□□ 0.51
TRAPPC10-203ENST00000422875 KIZQ2M2Z5 673 aa18.22■□□□□ 0.51
TRAPPC10-203ENST00000422875 ENTPD3O75355 529 aa18.22■□□□□ 0.51
TRAPPC10-203ENST00000422875 SREBF1P36956 1147 aa18.22■□□□□ 0.51
TRAPPC10-203ENST00000422875 RPL10AP62906 217 aaKnown RBP18.22■□□□□ 0.51
TRAPPC10-203ENST00000422875 KCTD17Q8N5Z5 321 aa18.22■□□□□ 0.51
TRAPPC10-203ENST00000422875 TCP10LQ8TDR4 215 aa18.22■□□□□ 0.51
TRAPPC10-203ENST00000422875 LPAR1Q92633 364 aa18.22■□□□□ 0.51
TRAPPC10-203ENST00000422875 CRAMP1Q96RY5 1269 aa18.22■□□□□ 0.51
TRAPPC10-203ENST00000422875 TMEM39BQ9GZU3 492 aa18.22■□□□□ 0.51
TRAPPC10-203ENST00000422875 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.22■□□□□ 0.51
TRAPPC10-203ENST00000422875 ITGB3P05106 788 aa18.22■□□□□ 0.51
TRAPPC10-203ENST00000422875 TMED10P49755 219 aaKnown RBP18.22■□□□□ 0.51
TRAPPC10-203ENST00000422875 ABCE1P61221 599 aaKnown RBP18.22■□□□□ 0.51
TRAPPC10-203ENST00000422875 SNRPFP62306 86 aaKnown RBP18.22■□□□□ 0.51
TRAPPC10-203ENST00000422875 PPATQ06203 517 aa18.22■□□□□ 0.51
TRAPPC10-203ENST00000422875 PRAMEF18Q5VWM3 479 aa18.22■□□□□ 0.51
TRAPPC10-203ENST00000422875 DENND5BQ6ZUT9 1274 aa18.22■□□□□ 0.51
TRAPPC10-203ENST00000422875 ADCK1Q86TW2 530 aa18.22■□□□□ 0.51
TRAPPC10-203ENST00000422875 SLC7A14Q8TBB6 771 aa18.22■□□□□ 0.51
TRAPPC10-203ENST00000422875 HPDLQ96IR7 371 aa18.22■□□□□ 0.51
TRAPPC10-203ENST00000422875 OLFML3Q9NRN5 406 aa18.22■□□□□ 0.51
TRAPPC10-203ENST00000422875 KRT16P08779 473 aa18.22■□□□□ 0.51
TRAPPC10-203ENST00000422875 HMOX2P30519 316 aa18.22■□□□□ 0.51
TRAPPC10-203ENST00000422875 ATPAF2Q8N5M1 289 aa18.22■□□□□ 0.51
TRAPPC10-203ENST00000422875 APPL2Q8NEU8 664 aa18.22■□□□□ 0.51
TRAPPC10-203ENST00000422875 PGM2Q96G03 612 aa18.22■□□□□ 0.51
TRAPPC10-203ENST00000422875 COG4Q9H9E3 785 aa18.22■□□□□ 0.51
TRAPPC10-203ENST00000422875 SNX13Q9Y5W8 968 aa18.22■□□□□ 0.51
TRAPPC10-203ENST00000422875 DEAF1O75398 565 aaPredicted RBP18.21■□□□□ 0.51
TRAPPC10-203ENST00000422875 TGM2P21980 687 aa18.21■□□□□ 0.51
TRAPPC10-203ENST00000422875 ELF3P78545 371 aaPredicted RBP18.21■□□□□ 0.51
TRAPPC10-203ENST00000422875 PKN2Q16513 984 aaKnown RBP18.21■□□□□ 0.51
TRAPPC10-203ENST00000422875 SPDYAQ5MJ70 313 aa18.21■□□□□ 0.51
TRAPPC10-203ENST00000422875 SPOCD1Q6ZMY3 1216 aa18.21■□□□□ 0.51
TRAPPC10-203ENST00000422875 PRUNE1Q86TP1 453 aa18.21■□□□□ 0.51
TRAPPC10-203ENST00000422875 CNPY4Q8N129 248 aa18.21■□□□□ 0.51
TRAPPC10-203ENST00000422875 EXD1Q8NHP7 514 aa18.21■□□□□ 0.51
TRAPPC10-203ENST00000422875 PCDHGC5Q9Y5F6 944 aa18.21■□□□□ 0.51
TRAPPC10-203ENST00000422875 GTPBP10A4D1E9 387 aaKnown RBP18.21■□□□□ 0.51
TRAPPC10-203ENST00000422875 RNF225M0QZC1 329 aaPredicted RBP18.21■□□□□ 0.51
TRAPPC10-203ENST00000422875 SHBGP04278 402 aa18.21■□□□□ 0.51
TRAPPC10-203ENST00000422875 GOLGA7BQ2TAP0 167 aa18.21■□□□□ 0.51
TRAPPC10-203ENST00000422875 SETD3Q86TU7 594 aaPredicted RBP18.21■□□□□ 0.51
TRAPPC10-203ENST00000422875 SLC26A11Q86WA9 606 aa18.21■□□□□ 0.51
TRAPPC10-203ENST00000422875 ASAP3Q8TDY4 903 aa18.21■□□□□ 0.51
TRAPPC10-203ENST00000422875 RIOX1Q9H6W3 641 aa18.21■□□□□ 0.51
TRAPPC10-203ENST00000422875 PPRC1Q5VV67 1664 aaKnown RBP18.21■□□□□ 0.51
TRAPPC10-203ENST00000422875 PIK3CDO00329 1044 aa18.21■□□□□ 0.51
TRAPPC10-203ENST00000422875 PECAM1P16284 738 aaPredicted RBP18.21■□□□□ 0.51
TRAPPC10-203ENST00000422875 HLA-DPA1P20036 260 aa18.21■□□□□ 0.51
TRAPPC10-203ENST00000422875 ATG4CQ96DT6 458 aa18.21■□□□□ 0.51
TRAPPC10-203ENST00000422875 MED15Q96RN5 788 aa18.21■□□□□ 0.51
TRAPPC10-203ENST00000422875 BEGAINQ9BUH8 593 aa18.21■□□□□ 0.51
TRAPPC10-203ENST00000422875 PNMA3Q9UL41 463 aa18.21■□□□□ 0.51
TRAPPC10-203ENST00000422875 TMEM247A6NEH6 219 aa18.21■□□□□ 0.5
TRAPPC10-203ENST00000422875 SHCBP1Q8NEM2 672 aa18.21■□□□□ 0.5
TRAPPC10-203ENST00000422875 ASIC4Q96FT7 647 aa18.21■□□□□ 0.5
TRAPPC10-203ENST00000422875 MMP19Q99542 508 aa18.21■□□□□ 0.5
TRAPPC10-203ENST00000422875 APOL2Q9BQE5 337 aa18.21■□□□□ 0.5
TRAPPC10-203ENST00000422875 NINJ2Q9NZG7 142 aa18.21■□□□□ 0.5
TRAPPC10-203ENST00000422875 FAM237AA0A1B0GTK4 181 aa18.2■□□□□ 0.5
TRAPPC10-203ENST00000422875 OPLAHO14841 1288 aa18.2■□□□□ 0.5
TRAPPC10-203ENST00000422875 CYTH3O43739 400 aa18.2■□□□□ 0.5
TRAPPC10-203ENST00000422875 SOX10P56693 466 aa18.2■□□□□ 0.5
TRAPPC10-203ENST00000422875 PLIN5Q00G26 463 aa18.2■□□□□ 0.5
TRAPPC10-203ENST00000422875 DMC1Q14565 340 aa18.2■□□□□ 0.5
TRAPPC10-203ENST00000422875 FRMD8Q9BZ67 464 aaPredicted RBP18.2■□□□□ 0.5
TRAPPC10-203ENST00000422875 PIM2Q9P1W9 311 aa18.2■□□□□ 0.5
TRAPPC10-203ENST00000422875 SLC24A2Q9UI40 661 aa18.2■□□□□ 0.5
TRAPPC10-203ENST00000422875 POLIQ9UNA4 740 aa18.2■□□□□ 0.5
TRAPPC10-203ENST00000422875 C16orf96A6NNT2 1141 aa18.2■□□□□ 0.5
TRAPPC10-203ENST00000422875 M0R3G1 203 aa18.2■□□□□ 0.5
TRAPPC10-203ENST00000422875 SERPINB10P48595 397 aa18.2■□□□□ 0.5
TRAPPC10-203ENST00000422875 POU5F2Q8N7G0 328 aa18.2■□□□□ 0.5
TRAPPC10-203ENST00000422875 ZNF555Q8NEP9 628 aa18.2■□□□□ 0.5
TRAPPC10-203ENST00000422875 ATXN2LQ8WWM7 1075 aaKnown RBP18.2■□□□□ 0.5
TRAPPC10-203ENST00000422875 PRPF18Q99633 342 aaKnown RBP18.2■□□□□ 0.5
TRAPPC10-203ENST00000422875 PALMDQ9NP74 551 aa18.2■□□□□ 0.5
TRAPPC10-203ENST00000422875 CHST7Q9NS84 486 aa18.2■□□□□ 0.5
TRAPPC10-203ENST00000422875 FCHO1O14526 889 aa18.2■□□□□ 0.5
TRAPPC10-203ENST00000422875 AMHR2Q16671 573 aa18.2■□□□□ 0.5
TRAPPC10-203ENST00000422875 TKFCQ3LXA3 575 aa18.2■□□□□ 0.5
TRAPPC10-203ENST00000422875 ISLR2Q6UXK2 745 aa18.2■□□□□ 0.5
TRAPPC10-203ENST00000422875 EP400NLQ6ZTU2 488 aa18.2■□□□□ 0.5
TRAPPC10-203ENST00000422875 ARHGEF19Q8IW93 802 aa18.2■□□□□ 0.5
TRAPPC10-203ENST00000422875 OR9Q1Q8NGQ5 310 aa18.2■□□□□ 0.5
TRAPPC10-203ENST00000422875 ADGRA2Q96PE1 1338 aa18.2■□□□□ 0.5
TRAPPC10-203ENST00000422875 C1orf167Q5SNV9 1468 aa18.2■□□□□ 0.5
TRAPPC10-203ENST00000422875 GLRA3O75311 464 aa18.2■□□□□ 0.5
TRAPPC10-203ENST00000422875 PMPCBO75439 489 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms