RNA–Protein interactions for RNA: ENST00000422622.3

SSPN-202, Transcript of sarcospan, humanhuman

TSL 2 BASIC

Gene SSPN, Length 4,348 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-202ENST00000422622 CD99L2Q8TCZ2 262 aa10.57□□□□□ -0.72
SSPN-202ENST00000422622 RAB3IPQ96QF0 476 aaPredicted RBP10.57□□□□□ -0.72
SSPN-202ENST00000422622 STRA6Q9BX79 667 aa10.57□□□□□ -0.72
SSPN-202ENST00000422622 GPATCH2LQ9NWQ4 482 aa10.57□□□□□ -0.72
SSPN-202ENST00000422622 F8VP50 259 aa10.57□□□□□ -0.72
SSPN-202ENST00000422622 PFDN1O60925 122 aa10.57□□□□□ -0.72
SSPN-202ENST00000422622 RALAP11233 206 aa10.57□□□□□ -0.72
SSPN-202ENST00000422622 TMED2Q15363 201 aa10.57□□□□□ -0.72
SSPN-202ENST00000422622 GOLGA7BQ2TAP0 167 aa10.57□□□□□ -0.72
SSPN-202ENST00000422622 ZC3H18Q86VM9 953 aaKnown RBP10.57□□□□□ -0.72
SSPN-202ENST00000422622 APBA2Q99767 749 aa10.57□□□□□ -0.72
SSPN-202ENST00000422622 IFT122Q9HBG6 1241 aa10.57□□□□□ -0.72
SSPN-202ENST00000422622 TNFSF13BQ9Y275 285 aa10.57□□□□□ -0.72
SSPN-202ENST00000422622 PCDHGC5Q9Y5F6 944 aa10.57□□□□□ -0.72
SSPN-202ENST00000422622 DNAH12Q6ZR08 3092 aa10.56□□□□□ -0.72
SSPN-202ENST00000422622 NOL3O60936 208 aaKnown RBP10.56□□□□□ -0.72
SSPN-202ENST00000422622 B3GAT3O94766 335 aa10.56□□□□□ -0.72
SSPN-202ENST00000422622 ATF2P15336 505 aa10.56□□□□□ -0.72
SSPN-202ENST00000422622 CACNB2Q08289 660 aaPredicted RBP10.56□□□□□ -0.72
SSPN-202ENST00000422622 ZC3H3Q8IXZ2 948 aaKnown RBP10.56□□□□□ -0.72
SSPN-202ENST00000422622 ABI1Q8IZP0 508 aa10.56□□□□□ -0.72
SSPN-202ENST00000422622 KATNAL1Q9BW62 490 aa10.56□□□□□ -0.72
SSPN-202ENST00000422622 NT5C1AQ9BXI3 368 aa10.56□□□□□ -0.72
SSPN-202ENST00000422622 GPR88Q9GZN0 384 aa10.56□□□□□ -0.72
SSPN-202ENST00000422622 PDLIM7Q9NR12 457 aa10.56□□□□□ -0.72
SSPN-202ENST00000422622 PARVAQ9NVD7 372 aa10.56□□□□□ -0.72
SSPN-202ENST00000422622 SAE1Q9UBE0 346 aaPredicted RBP10.56□□□□□ -0.72
SSPN-202ENST00000422622 TMEM88BA6NKF7 163 aa10.56□□□□□ -0.72
SSPN-202ENST00000422622 TSPAN1O60635 241 aa10.56□□□□□ -0.72
SSPN-202ENST00000422622 IL18RAPO95256 599 aa10.56□□□□□ -0.72
SSPN-202ENST00000422622 FAM153BP0C7A2 387 aa10.56□□□□□ -0.72
SSPN-202ENST00000422622 SAT1P21673 171 aa10.56□□□□□ -0.72
SSPN-202ENST00000422622 MLH1P40692 756 aa10.56□□□□□ -0.72
SSPN-202ENST00000422622 HADHQ16836 314 aaKnown RBP10.56□□□□□ -0.72
SSPN-202ENST00000422622 SLC10A6Q3KNW5 377 aa10.56□□□□□ -0.72
SSPN-202ENST00000422622 FAM153CQ494X1 144 aa10.56□□□□□ -0.72
SSPN-202ENST00000422622 CCNI2Q6ZMN8 369 aaPredicted RBP10.56□□□□□ -0.72
SSPN-202ENST00000422622 CEP128Q6ZU80 1094 aa10.56□□□□□ -0.72
SSPN-202ENST00000422622 SPDL1Q96EA4 605 aa10.56□□□□□ -0.72
SSPN-202ENST00000422622 TRIM11Q96F44 468 aa10.56□□□□□ -0.72
SSPN-202ENST00000422622 FAM193BQ96PV7 902 aaPredicted RBP10.56□□□□□ -0.72
SSPN-202ENST00000422622 DDX23Q9BUQ8 820 aaKnown RBP10.56□□□□□ -0.72
SSPN-202ENST00000422622 LRRC4Q9HBW1 653 aa10.56□□□□□ -0.72
SSPN-202ENST00000422622 SEPT10Q9P0V9 454 aa10.56□□□□□ -0.72
SSPN-202ENST00000422622 FAM153AQ9UHL3 310 aa10.56□□□□□ -0.72
SSPN-202ENST00000422622 CPSF3Q9UKF6 684 aaKnown RBP10.56□□□□□ -0.72
SSPN-202ENST00000422622 L1RE1Q9UN81 338 aa10.56□□□□□ -0.72
SSPN-202ENST00000422622 CDY2AQ9Y6F7 541 aa10.56□□□□□ -0.72
SSPN-202ENST00000422622 NRCAMQ92823 1304 aa10.56□□□□□ -0.72
SSPN-202ENST00000422622 ASS1P00966 412 aaKnown RBP10.56□□□□□ -0.72
SSPN-202ENST00000422622 PDGFRAP16234 1089 aa10.56□□□□□ -0.72
SSPN-202ENST00000422622 SP3Q02447 781 aa10.56□□□□□ -0.72
SSPN-202ENST00000422622 PTPN11Q06124 597 aaPredicted RBP10.56□□□□□ -0.72
SSPN-202ENST00000422622 NME3Q13232 169 aa10.56□□□□□ -0.72
SSPN-202ENST00000422622 SLC27A1Q6PCB7 646 aa10.56□□□□□ -0.72
SSPN-202ENST00000422622 SCUBE3Q8IX30 993 aa10.56□□□□□ -0.72
SSPN-202ENST00000422622 TFAP2BQ92481 460 aa10.56□□□□□ -0.72
SSPN-202ENST00000422622 CAPNS2Q96L46 248 aa10.56□□□□□ -0.72
SSPN-202ENST00000422622 FAM81BQ96LP2 452 aa10.56□□□□□ -0.72
SSPN-202ENST00000422622 SCINQ9Y6U3 715 aa10.56□□□□□ -0.72
SSPN-202ENST00000422622 TCRBV7S2A1N4TA0A589 114 aa10.55□□□□□ -0.72
SSPN-202ENST00000422622 H7C0C1 242 aa10.55□□□□□ -0.72
SSPN-202ENST00000422622 O00370 1275 aa10.55□□□□□ -0.72
SSPN-202ENST00000422622 ECEL1O95672 775 aa10.55□□□□□ -0.72
SSPN-202ENST00000422622 ATP5OP48047 213 aa10.55□□□□□ -0.72
SSPN-202ENST00000422622 NFIL3Q16649 462 aa10.55□□□□□ -0.72
SSPN-202ENST00000422622 SCN4BQ8IWT1 228 aa10.55□□□□□ -0.72
SSPN-202ENST00000422622 NETO2Q8NC67 525 aa10.55□□□□□ -0.72
SSPN-202ENST00000422622 ZSWIM1Q9BR11 485 aa10.55□□□□□ -0.72
SSPN-202ENST00000422622 NUF2Q9BZD4 464 aa10.55□□□□□ -0.72
SSPN-202ENST00000422622 MCM3APO60318 1980 aa10.55□□□□□ -0.72
SSPN-202ENST00000422622 MYH9P35579 1960 aaKnown RBP10.55□□□□□ -0.72
SSPN-202ENST00000422622 PASKQ96RG2 1323 aa10.55□□□□□ -0.72
SSPN-202ENST00000422622 XPOTO43592 962 aaKnown RBP10.55□□□□□ -0.72
SSPN-202ENST00000422622 CCDC130P13994 396 aa10.55□□□□□ -0.72
SSPN-202ENST00000422622 AP3M2P53677 418 aa10.55□□□□□ -0.72
SSPN-202ENST00000422622 CASKIN2Q8WXE0 1202 aa10.55□□□□□ -0.72
SSPN-202ENST00000422622 ABTB1Q969K4 478 aaPredicted RBP10.55□□□□□ -0.72
SSPN-202ENST00000422622 GLT1D1Q96MS3 346 aa10.55□□□□□ -0.72
SSPN-202ENST00000422622 G3BP2Q9UN86 482 aaKnown RBP10.55□□□□□ -0.72
SSPN-202ENST00000422622 FER1L6Q2WGJ9 1857 aa10.55□□□□□ -0.72
SSPN-202ENST00000422622 PRRC2BQ5JSZ5 2229 aaKnown RBP10.55□□□□□ -0.72
SSPN-202ENST00000422622 MIF4GDA9UHW6 222 aaKnown RBP10.55□□□□□ -0.72
SSPN-202ENST00000422622 ZBTB42B2RXF5 422 aa10.55□□□□□ -0.72
SSPN-202ENST00000422622 LGR5O75473 907 aa10.55□□□□□ -0.72
SSPN-202ENST00000422622 CALB1P05937 261 aa10.55□□□□□ -0.72
SSPN-202ENST00000422622 ASGR1P07306 291 aa10.55□□□□□ -0.72
SSPN-202ENST00000422622 MCF2P10911 925 aa10.55□□□□□ -0.72
SSPN-202ENST00000422622 CA4P22748 312 aa10.55□□□□□ -0.72
SSPN-202ENST00000422622 CD52P31358 61 aa10.55□□□□□ -0.72
SSPN-202ENST00000422622 MSH2P43246 934 aa10.55□□□□□ -0.72
SSPN-202ENST00000422622 MCL1Q07820 350 aa10.55□□□□□ -0.72
SSPN-202ENST00000422622 C1orf228Q6PIY5 440 aa10.55□□□□□ -0.72
SSPN-202ENST00000422622 TSHZ1Q6ZSZ6 1077 aa10.55□□□□□ -0.72
SSPN-202ENST00000422622 KIRREL3Q8IZU9 778 aa10.55□□□□□ -0.72
SSPN-202ENST00000422622 APPL2Q8NEU8 664 aa10.55□□□□□ -0.72
SSPN-202ENST00000422622 RSAD2Q8WXG1 361 aa10.55□□□□□ -0.72
SSPN-202ENST00000422622 CXCL16Q9H2A7 254 aa10.55□□□□□ -0.72
SSPN-202ENST00000422622 UVRAGQ9P2Y5 699 aa10.55□□□□□ -0.72
SSPN-202ENST00000422622 RNF14Q9UBS8 474 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms