RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 ADORA2BP29275 332 aa16.68■□□□□ 0.26
DDX55-203ENST00000421670 PTK2Q05397 1052 aa16.68■□□□□ 0.26
DDX55-203ENST00000421670 RAB33AQ14088 237 aa16.68■□□□□ 0.26
DDX55-203ENST00000421670 TAF3Q5VWG9 929 aa16.68■□□□□ 0.26
DDX55-203ENST00000421670 IRF2BP2Q7Z5L9 587 aa16.68■□□□□ 0.26
DDX55-203ENST00000421670 FUKQ8N0W3 1084 aa16.68■□□□□ 0.26
DDX55-203ENST00000421670 TTC9BQ8N6N2 239 aa16.68■□□□□ 0.26
DDX55-203ENST00000421670 ATAD1Q8NBU5 361 aa16.68■□□□□ 0.26
DDX55-203ENST00000421670 SLC20A1Q8WUM9 679 aa16.68■□□□□ 0.26
DDX55-203ENST00000421670 CYFIP2Q96F07 1278 aa16.68■□□□□ 0.26
DDX55-203ENST00000421670 DNAJC7Q99615 494 aa16.68■□□□□ 0.26
DDX55-203ENST00000421670 MED10Q9BTT4 135 aa16.68■□□□□ 0.26
DDX55-203ENST00000421670 ZNF518BQ9C0D4 1074 aa16.68■□□□□ 0.26
DDX55-203ENST00000421670 DNAI2Q9GZS0 605 aa16.68■□□□□ 0.26
DDX55-203ENST00000421670 CRISPLD1Q9H336 500 aa16.68■□□□□ 0.26
DDX55-203ENST00000421670 AIPL1Q9NZN9 384 aa16.68■□□□□ 0.26
DDX55-203ENST00000421670 ZNF638Q14966 1978 aaKnown RBP16.68■□□□□ 0.26
DDX55-203ENST00000421670 O00370 1275 aa16.68■□□□□ 0.26
DDX55-203ENST00000421670 TGM5O43548 720 aa16.68■□□□□ 0.26
DDX55-203ENST00000421670 CFHP08603 1231 aa16.68■□□□□ 0.26
DDX55-203ENST00000421670 SPATA31D3P0C874 917 aa16.68■□□□□ 0.26
DDX55-203ENST00000421670 SKILP12757 684 aa16.68■□□□□ 0.26
DDX55-203ENST00000421670 ADCY1Q08828 1119 aa16.68■□□□□ 0.26
DDX55-203ENST00000421670 ADGRE1Q14246 886 aa16.68■□□□□ 0.26
DDX55-203ENST00000421670 ARID5BQ14865 1188 aa16.68■□□□□ 0.26
DDX55-203ENST00000421670 MAPRE1Q15691 268 aaKnown RBP16.68■□□□□ 0.26
DDX55-203ENST00000421670 NFE2Q16621 373 aaPredicted RBP16.68■□□□□ 0.26
DDX55-203ENST00000421670 GOLGA7BQ2TAP0 167 aa16.68■□□□□ 0.26
DDX55-203ENST00000421670 SPATA31D4Q6ZUB0 917 aa16.68■□□□□ 0.26
DDX55-203ENST00000421670 PAQR9Q6ZVX9 377 aa16.68■□□□□ 0.26
DDX55-203ENST00000421670 FAM35AQ86V20 835 aa16.68■□□□□ 0.26
DDX55-203ENST00000421670 SPATA2LQ8IUW3 424 aaPredicted RBP16.68■□□□□ 0.26
DDX55-203ENST00000421670 OR8K1Q8NGG5 319 aa16.68■□□□□ 0.26
DDX55-203ENST00000421670 ZNF606Q8WXB4 792 aa16.68■□□□□ 0.26
DDX55-203ENST00000421670 NUCKS1Q9H1E3 243 aaKnown RBP16.68■□□□□ 0.26
DDX55-203ENST00000421670 IMPACTQ9P2X3 320 aa16.68■□□□□ 0.26
DDX55-203ENST00000421670 NOCTQ9UK39 431 aaKnown RBP16.68■□□□□ 0.26
DDX55-203ENST00000421670 TSPAN16Q9UKR8 245 aa16.68■□□□□ 0.26
DDX55-203ENST00000421670 CLASP2O75122 1294 aaKnown RBP16.67■□□□□ 0.26
DDX55-203ENST00000421670 ABLIM3O94929 683 aa16.67■□□□□ 0.26
DDX55-203ENST00000421670 BDNFP23560 247 aa16.67■□□□□ 0.26
DDX55-203ENST00000421670 CYP2F1P24903 491 aa16.67■□□□□ 0.26
DDX55-203ENST00000421670 NRIP1P48552 1158 aa16.67■□□□□ 0.26
DDX55-203ENST00000421670 CLCN4P51793 760 aa16.67■□□□□ 0.26
DDX55-203ENST00000421670 CACNA2D1P54289 1103 aa16.67■□□□□ 0.26
DDX55-203ENST00000421670 BPIFB4P59827 614 aa16.67■□□□□ 0.26
DDX55-203ENST00000421670 WDR59Q6PJI9 974 aa16.67■□□□□ 0.26
DDX55-203ENST00000421670 C4orf50Q6ZRC1 276 aa16.67■□□□□ 0.26
DDX55-203ENST00000421670 ZNF461Q8TAF7 563 aa16.67■□□□□ 0.26
DDX55-203ENST00000421670 DDX1Q92499 740 aaKnown RBP16.67■□□□□ 0.26
DDX55-203ENST00000421670 SYN2Q92777 582 aaPredicted RBP16.67■□□□□ 0.26
DDX55-203ENST00000421670 KRT82Q9NSB4 513 aa16.67■□□□□ 0.26
DDX55-203ENST00000421670 TMEM30AQ9NV96 361 aa16.67■□□□□ 0.26
DDX55-203ENST00000421670 AFF4Q9UHB7 1163 aaKnown RBP16.67■□□□□ 0.26
DDX55-203ENST00000421670 KIAA1257Q9ULG3 409 aa16.67■□□□□ 0.26
DDX55-203ENST00000421670 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.67■□□□□ 0.26
DDX55-203ENST00000421670 PCDHB5Q9Y5E4 795 aa16.67■□□□□ 0.26
DDX55-203ENST00000421670 FAM170AA1A519 330 aa16.66■□□□□ 0.26
DDX55-203ENST00000421670 M0QYV0 167 aa16.66■□□□□ 0.26
DDX55-203ENST00000421670 SOAT2O75908 522 aa16.66■□□□□ 0.26
DDX55-203ENST00000421670 GLUD1P00367 558 aa16.66■□□□□ 0.26
DDX55-203ENST00000421670 PLEKP08567 350 aaPredicted RBP16.66■□□□□ 0.26
DDX55-203ENST00000421670 GTF2F1P35269 517 aaKnown RBP eCLIP16.66■□□□□ 0.26
DDX55-203ENST00000421670 RBM10P98175 930 aaKnown RBP16.66■□□□□ 0.26
DDX55-203ENST00000421670 KLHL30Q0D2K2 578 aa16.66■□□□□ 0.26
DDX55-203ENST00000421670 DUSP4Q13115 394 aa16.66■□□□□ 0.26
DDX55-203ENST00000421670 TDRD12Q587J7 1177 aaKnown RBP16.66■□□□□ 0.26
DDX55-203ENST00000421670 TPGS2Q68CL5 300 aa16.66■□□□□ 0.26
DDX55-203ENST00000421670 HGSNATQ68CP4 663 aa16.66■□□□□ 0.26
DDX55-203ENST00000421670 ARHGAP17Q68EM7 881 aa16.66■□□□□ 0.26
DDX55-203ENST00000421670 SMYD5Q6GMV2 418 aa16.66■□□□□ 0.26
DDX55-203ENST00000421670 PASD1Q8IV76 773 aa16.66■□□□□ 0.26
DDX55-203ENST00000421670 FMNL3Q8IVF7 1028 aa16.66■□□□□ 0.26
DDX55-203ENST00000421670 HNRNPABQ99729 332 aaKnown RBP16.66■□□□□ 0.26
DDX55-203ENST00000421670 NSUN3Q9H649 340 aaKnown RBP16.66■□□□□ 0.26
DDX55-203ENST00000421670 HAUS4Q9H6D7 363 aa16.66■□□□□ 0.26
DDX55-203ENST00000421670 TLE6Q9H808 572 aa16.66■□□□□ 0.26
DDX55-203ENST00000421670 SLC27A5Q9Y2P5 690 aa16.66■□□□□ 0.26
DDX55-203ENST00000421670 C2orf16Q68DN1 1984 aa16.66■□□□□ 0.26
DDX55-203ENST00000421670 GOLGA6L6A8MZA4 724 aa16.65■□□□□ 0.26
DDX55-203ENST00000421670 MICAL2O94851 1124 aa16.65■□□□□ 0.26
DDX55-203ENST00000421670 SEC24AO95486 1093 aa16.65■□□□□ 0.26
DDX55-203ENST00000421670 MMEP08473 750 aa16.65■□□□□ 0.26
DDX55-203ENST00000421670 CCDC172P0C7W6 258 aa16.65■□□□□ 0.26
DDX55-203ENST00000421670 ATF2P15336 505 aa16.65■□□□□ 0.26
DDX55-203ENST00000421670 EPCAMP16422 314 aa16.65■□□□□ 0.26
DDX55-203ENST00000421670 CHRNB2P17787 502 aa16.65■□□□□ 0.26
DDX55-203ENST00000421670 IGFBP4P22692 258 aa16.65■□□□□ 0.26
DDX55-203ENST00000421670 HNRNPH3P31942 346 aaKnown RBP16.65■□□□□ 0.26
DDX55-203ENST00000421670 PRKCIP41743 596 aa16.65■□□□□ 0.26
DDX55-203ENST00000421670 DUSP6Q16828 381 aa16.65■□□□□ 0.26
DDX55-203ENST00000421670 CFAP221Q4G0U5 840 aa16.65■□□□□ 0.26
DDX55-203ENST00000421670 TCEAL5Q5H9L2 206 aa16.65■□□□□ 0.26
DDX55-203ENST00000421670 LLGL2Q6P1M3 1020 aa16.65■□□□□ 0.26
DDX55-203ENST00000421670 LILRA6Q6PI73 481 aa16.65■□□□□ 0.26
DDX55-203ENST00000421670 TTC30AQ86WT1 665 aa16.65■□□□□ 0.26
DDX55-203ENST00000421670 SPPL2BQ8TCT7 592 aa16.65■□□□□ 0.26
DDX55-203ENST00000421670 SMARCD1Q96GM5 515 aa16.65■□□□□ 0.26
DDX55-203ENST00000421670 SEPT5Q99719 369 aaPredicted RBP16.65■□□□□ 0.26
DDX55-203ENST00000421670 CYP4F11Q9HBI6 524 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms