RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 VDRP11473 427 aa18.63■□□□□ 0.57
LINC00271-201ENST00000421378 EPCAMP16422 314 aa18.63■□□□□ 0.57
LINC00271-201ENST00000421378 GNA15P30679 374 aa18.63■□□□□ 0.57
LINC00271-201ENST00000421378 ELF1P32519 619 aa18.63■□□□□ 0.57
LINC00271-201ENST00000421378 LLGL2Q6P1M3 1020 aa18.63■□□□□ 0.57
LINC00271-201ENST00000421378 SPATA31D4Q6ZUB0 917 aa18.63■□□□□ 0.57
LINC00271-201ENST00000421378 FMNL3Q8IVF7 1028 aa18.63■□□□□ 0.57
LINC00271-201ENST00000421378 FUKQ8N0W3 1084 aa18.63■□□□□ 0.57
LINC00271-201ENST00000421378 KREMEN2Q8NCW0 462 aa18.63■□□□□ 0.57
LINC00271-201ENST00000421378 SLC22A17Q8WUG5 538 aa18.63■□□□□ 0.57
LINC00271-201ENST00000421378 CPLX3Q8WVH0 158 aa18.63■□□□□ 0.57
LINC00271-201ENST00000421378 CYFIP2Q96F07 1278 aa18.63■□□□□ 0.57
LINC00271-201ENST00000421378 B3GNT5Q9BYG0 378 aa18.63■□□□□ 0.57
LINC00271-201ENST00000421378 CYP4F11Q9HBI6 524 aa18.63■□□□□ 0.57
LINC00271-201ENST00000421378 ACP6Q9NPH0 428 aa18.63■□□□□ 0.57
LINC00271-201ENST00000421378 MAN1C1Q9NR34 630 aa18.63■□□□□ 0.57
LINC00271-201ENST00000421378 DPP7Q9UHL4 492 aa18.63■□□□□ 0.57
LINC00271-201ENST00000421378 LUC7L2Q9Y383 392 aaKnown RBP18.63■□□□□ 0.57
LINC00271-201ENST00000421378 PRRG1O14668 218 aa18.62■□□□□ 0.57
LINC00271-201ENST00000421378 CASP14P31944 242 aa18.62■□□□□ 0.57
LINC00271-201ENST00000421378 CLCN1P35523 988 aa18.62■□□□□ 0.57
LINC00271-201ENST00000421378 MRE11P49959 708 aa18.62■□□□□ 0.57
LINC00271-201ENST00000421378 BPIFB4P59827 614 aa18.62■□□□□ 0.57
LINC00271-201ENST00000421378 DUSP4Q13115 394 aa18.62■□□□□ 0.57
LINC00271-201ENST00000421378 PPP1R26Q5T8A7 1209 aaPredicted RBP18.62■□□□□ 0.57
LINC00271-201ENST00000421378 LIN9Q5TKA1 542 aa18.62■□□□□ 0.57
LINC00271-201ENST00000421378 ELMSAN1Q6PJG2 1045 aa18.62■□□□□ 0.57
LINC00271-201ENST00000421378 SLC47A2Q86VL8 602 aa18.62■□□□□ 0.57
LINC00271-201ENST00000421378 EFHBQ8N7U6 833 aa18.62■□□□□ 0.57
LINC00271-201ENST00000421378 HNRNPABQ99729 332 aaKnown RBP18.62■□□□□ 0.57
LINC00271-201ENST00000421378 MED10Q9BTT4 135 aa18.62■□□□□ 0.57
LINC00271-201ENST00000421378 RHOBTB2Q9BYZ6 727 aa18.62■□□□□ 0.57
LINC00271-201ENST00000421378 ZNF518BQ9C0D4 1074 aa18.62■□□□□ 0.57
LINC00271-201ENST00000421378 CRISPLD1Q9H336 500 aa18.62■□□□□ 0.57
LINC00271-201ENST00000421378 PLEKHA4Q9H4M7 779 aa18.62■□□□□ 0.57
LINC00271-201ENST00000421378 HSFX1Q9UBD0 423 aa18.62■□□□□ 0.57
LINC00271-201ENST00000421378 ATP8B3O60423 1300 aa18.62■□□□□ 0.57
LINC00271-201ENST00000421378 CLDN5O00501 218 aa18.61■□□□□ 0.57
LINC00271-201ENST00000421378 CALCAP01258 141 aa18.61■□□□□ 0.57
LINC00271-201ENST00000421378 BDNFP23560 247 aa18.61■□□□□ 0.57
LINC00271-201ENST00000421378 BRD2P25440 801 aaKnown RBP18.61■□□□□ 0.57
LINC00271-201ENST00000421378 ADORA2BP29275 332 aa18.61■□□□□ 0.57
LINC00271-201ENST00000421378 PDE6CP51160 858 aa18.61■□□□□ 0.57
LINC00271-201ENST00000421378 ZBED6P86452 979 aa18.61■□□□□ 0.57
LINC00271-201ENST00000421378 RBM10P98175 930 aaKnown RBP18.61■□□□□ 0.57
LINC00271-201ENST00000421378 ARID5AQ03989 594 aa18.61■□□□□ 0.57
LINC00271-201ENST00000421378 KCNC3Q14003 757 aa18.61■□□□□ 0.57
LINC00271-201ENST00000421378 MGAT5BQ3V5L5 792 aa18.61■□□□□ 0.57
LINC00271-201ENST00000421378 ARHGAP17Q68EM7 881 aa18.61■□□□□ 0.57
LINC00271-201ENST00000421378 CCDC149Q6ZUS6 474 aa18.61■□□□□ 0.57
LINC00271-201ENST00000421378 FAM35AQ86V20 835 aa18.61■□□□□ 0.57
LINC00271-201ENST00000421378 GPIHBP1Q8IV16 184 aa18.61■□□□□ 0.57
LINC00271-201ENST00000421378 TCEAL8Q8IYN2 117 aa18.61■□□□□ 0.57
LINC00271-201ENST00000421378 TTC9BQ8N6N2 239 aa18.61■□□□□ 0.57
LINC00271-201ENST00000421378 SLC7A14Q8TBB6 771 aa18.61■□□□□ 0.57
LINC00271-201ENST00000421378 TFAP2BQ92481 460 aa18.61■□□□□ 0.57
LINC00271-201ENST00000421378 SMARCD1Q96GM5 515 aa18.61■□□□□ 0.57
LINC00271-201ENST00000421378 SEPT5Q99719 369 aaPredicted RBP18.61■□□□□ 0.57
LINC00271-201ENST00000421378 NUCKS1Q9H1E3 243 aaKnown RBP18.61■□□□□ 0.57
LINC00271-201ENST00000421378 KRT82Q9NSB4 513 aa18.61■□□□□ 0.57
LINC00271-201ENST00000421378 SLC27A5Q9Y2P5 690 aa18.61■□□□□ 0.57
LINC00271-201ENST00000421378 PTPRDP23468 1912 aa18.61■□□□□ 0.57
LINC00271-201ENST00000421378 XIRP2A4UGR9 3374 aa18.61■□□□□ 0.57
LINC00271-201ENST00000421378 O00370 1275 aa18.6■□□□□ 0.57
LINC00271-201ENST00000421378 THAP12O43422 761 aa18.6■□□□□ 0.57
LINC00271-201ENST00000421378 SEC24AO95486 1093 aa18.6■□□□□ 0.57
LINC00271-201ENST00000421378 C8AP07357 584 aa18.6■□□□□ 0.57
LINC00271-201ENST00000421378 CCDC172P0C7W6 258 aa18.6■□□□□ 0.57
LINC00271-201ENST00000421378 SRGAP2BP0DMP2 458 aa18.6■□□□□ 0.57
LINC00271-201ENST00000421378 CYP11B1P15538 503 aa18.6■□□□□ 0.57
LINC00271-201ENST00000421378 CYP2F1P24903 491 aa18.6■□□□□ 0.57
LINC00271-201ENST00000421378 CDC25BP30305 580 aa18.6■□□□□ 0.57
LINC00271-201ENST00000421378 STILQ15468 1287 aa18.6■□□□□ 0.57
LINC00271-201ENST00000421378 VSTM1Q6UX27 236 aa18.6■□□□□ 0.57
LINC00271-201ENST00000421378 PAQR9Q6ZVX9 377 aa18.6■□□□□ 0.57
LINC00271-201ENST00000421378 DRC7Q8IY82 874 aa18.6■□□□□ 0.57
LINC00271-201ENST00000421378 VN1R2Q8NFZ6 395 aa18.6■□□□□ 0.57
LINC00271-201ENST00000421378 HDAC7Q8WUI4 952 aa18.6■□□□□ 0.57
LINC00271-201ENST00000421378 CASP10Q92851 521 aa18.6■□□□□ 0.57
LINC00271-201ENST00000421378 ZSWIM1Q9BR11 485 aa18.6■□□□□ 0.57
LINC00271-201ENST00000421378 TSPAN16Q9UKR8 245 aa18.6■□□□□ 0.57
LINC00271-201ENST00000421378 SPDYE4A6NLX3 237 aa18.59■□□□□ 0.57
LINC00271-201ENST00000421378 MED7O43513 233 aa18.59■□□□□ 0.57
LINC00271-201ENST00000421378 NCK2O43639 380 aa18.59■□□□□ 0.57
LINC00271-201ENST00000421378 GLP2RO95838 553 aa18.59■□□□□ 0.57
LINC00271-201ENST00000421378 FAM200BP0CF97 657 aa18.59■□□□□ 0.57
LINC00271-201ENST00000421378 FERP16591 822 aa18.59■□□□□ 0.57
LINC00271-201ENST00000421378 KRT9P35527 623 aa18.59■□□□□ 0.57
LINC00271-201ENST00000421378 MAGEA11P43364 429 aa18.59■□□□□ 0.57
LINC00271-201ENST00000421378 TUFMP49411 452 aaKnown RBP18.59■□□□□ 0.57
LINC00271-201ENST00000421378 SFMBT2Q5VUG0 894 aa18.59■□□□□ 0.57
LINC00271-201ENST00000421378 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.59■□□□□ 0.57
LINC00271-201ENST00000421378 EPS8L1Q8TE68 723 aa18.59■□□□□ 0.57
LINC00271-201ENST00000421378 ZNF606Q8WXB4 792 aa18.59■□□□□ 0.57
LINC00271-201ENST00000421378 HESX1Q9UBX0 185 aa18.59■□□□□ 0.57
LINC00271-201ENST00000421378 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.59■□□□□ 0.57
LINC00271-201ENST00000421378 YIPF1Q9Y548 306 aa18.59■□□□□ 0.57
LINC00271-201ENST00000421378 INSL5Q9Y5Q6 135 aa18.59■□□□□ 0.57
LINC00271-201ENST00000421378 MTCL1Q9Y4B5 1905 aaKnown RBP18.59■□□□□ 0.57
LINC00271-201ENST00000421378 LINC01565O15544 149 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms