RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 HEXIM2Q96MH2 286 aaKnown RBP9.55□□□□□ -0.88
LINCMD1-201ENST00000418518 PPP1R10Q96QC0 940 aaKnown RBP9.55□□□□□ -0.88
LINCMD1-201ENST00000418518 FMO2Q99518 471 aa9.55□□□□□ -0.88
LINCMD1-201ENST00000418518 MRPL45Q9BRJ2 306 aaKnown RBP9.55□□□□□ -0.88
LINCMD1-201ENST00000418518 TRAIPQ9BWF2 469 aa9.55□□□□□ -0.88
LINCMD1-201ENST00000418518 DPH5Q9H2P9 285 aa9.55□□□□□ -0.88
LINCMD1-201ENST00000418518 PLEKHA4Q9H4M7 779 aa9.55□□□□□ -0.88
LINCMD1-201ENST00000418518 SPC25Q9HBM1 224 aa9.55□□□□□ -0.88
LINCMD1-201ENST00000418518 CHST12Q9NRB3 414 aa9.55□□□□□ -0.88
LINCMD1-201ENST00000418518 CHST7Q9NS84 486 aa9.55□□□□□ -0.88
LINCMD1-201ENST00000418518 TJP2Q9UDY2 1190 aa9.55□□□□□ -0.88
LINCMD1-201ENST00000418518 FEZ2Q9UHY8 353 aaPredicted RBP9.55□□□□□ -0.88
LINCMD1-201ENST00000418518 ADAM21Q9UKJ8 722 aa9.55□□□□□ -0.88
LINCMD1-201ENST00000418518 TSPAN16Q9UKR8 245 aa9.55□□□□□ -0.88
LINCMD1-201ENST00000418518 GINS2Q9Y248 185 aa9.55□□□□□ -0.88
LINCMD1-201ENST00000418518 HES2Q9Y543 173 aa9.55□□□□□ -0.88
LINCMD1-201ENST00000418518 CDY2AQ9Y6F7 541 aa9.55□□□□□ -0.88
LINCMD1-201ENST00000418518 NLRC5Q86WI3 1866 aa9.55□□□□□ -0.88
LINCMD1-201ENST00000418518 hCG_1818297A0A087WSY0 165 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 C3orf70A6NLC5 250 aaPredicted RBP9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 C2CD4BA6NLJ0 364 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 F8VP50 259 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 M0QZ92 97 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 PTGESO14684 152 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 TP73O15350 636 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 LRCH4O75427 683 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 ECM2O94769 699 aaPredicted RBP9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 KRT1P04264 644 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 KRT7P08729 469 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 NUDT17P0C025 328 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 WARSP23381 471 aaKnown RBP9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 PSMA2P25787 234 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 RFC1P35251 1148 aaPredicted RBP9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 PCK1P35558 622 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 FLT3P36888 993 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 HSD17B3P37058 310 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 CDKN2BP42772 138 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 TAF6P49848 677 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 PRKCZQ05513 592 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 SOX4Q06945 474 aaPredicted RBP9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 CACNB2Q08289 660 aaPredicted RBP9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 DMTNQ08495 405 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 ORC1Q13415 861 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 SOWAHAQ2M3V2 549 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 GOLGA7BQ2TAP0 167 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 GLIPR1L2Q4G1C9 344 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 GNASQ5JWF2 1037 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 MAP3K21Q5TCX8 1036 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 DAB2IPQ5VWQ8 1189 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 GDF6Q6KF10 455 aaPredicted RBP9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 RHBDF2Q6PJF5 856 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 MFSD7Q6UXD7 560 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 ARCQ7LC44 396 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 ANKS1BQ7Z6G8 1248 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 MRPL10Q7Z7H8 261 aaKnown RBP9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 TMEM110Q86TL2 294 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 TTC30AQ86WT1 665 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 CCDC105Q8IYK2 499 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 TOP6BLQ8N6T0 577 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 ARFGAP1Q8N6T3 406 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 ARRDC4Q8NCT1 418 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 ATL2Q8NHH9 583 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 RIN2Q8WYP3 895 aaPredicted RBP9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 RUFY1Q96T51 708 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 CNPY3Q9BT09 278 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 FRMD8P1Q9BZ68 369 aaPredicted RBP9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 RNF39Q9H2S5 420 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 EPB41L4BQ9H329 900 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 METTL5Q9NRN9 209 aaKnown RBP9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 VPS18Q9P253 973 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 ABT1Q9ULW3 272 aaKnown RBP9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 USTQ9Y2C2 406 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 R3HDM2Q9Y2K5 976 aaKnown RBP9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 SNX9Q9Y5X1 595 aa9.54□□□□□ -0.88
LINCMD1-201ENST00000418518 KPNA7A9QM74 516 aa9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 GOLGA8SH3BPF8 625 aa9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 SPTLC1O15269 473 aa9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 ZNF623O75123 536 aa9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 RPS6KA5O75582 802 aa9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 ENDOD1O94919 500 aa9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 GAS8O95995 478 aa9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 AKAP5P24588 427 aa9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 KCNJ1P48048 391 aa9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 ZNF143P52747 638 aaPredicted RBP9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 CAP1Q01518 475 aa9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 CAV1Q03135 178 aa9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 KRT17Q04695 432 aa9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 DSC3Q14574 896 aa9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 HADHQ16836 314 aaKnown RBP9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 TTMPQ5BVD1 217 aa9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 FAM26DQ5JW98 314 aa9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 GLRA4Q5JXX5 417 aa9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 PPP1R26Q5T8A7 1209 aaPredicted RBP9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 OLFML1Q6UWY5 402 aa9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 CXCL17Q6UXB2 119 aa9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 FAM183BPQ6ZVS7 135 aa9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 BBS12Q6ZW61 710 aa9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 VSIG1Q86XK7 387 aa9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 ZDHHC17Q8IUH5 632 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms