RNA–Protein interactions for RNA: ENST00000418454.2

HMGA1P6-201, Transcript of high mobility group AT-hook 1 pseudogene 6, humanhuman

BASIC

Gene HMGA1P6, Length 391 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P6-201ENST00000418454 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.69□□□□□ -0.7
HMGA1P6-201ENST00000418454 OR6C75A6NL08 312 aa10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 EFCAB8A8MWE9 144 aa10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 H7C4K7 107 aa10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 CTIFO43310 598 aaKnown RBP10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 BUB1O43683 1085 aa10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 BUB1BO60566 1050 aaPredicted RBP10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 DDHD2O94830 711 aa10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 FBXO21O94952 628 aa10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 EFEMP2O95967 443 aa10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 MYCP01106 439 aaPredicted RBP10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 FGFR1P11362 822 aa10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 KRT3P12035 628 aa10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 PAFAH1B1P43034 410 aa10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 AFF1P51825 1210 aaKnown RBP10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 CCL23P55773 120 aa10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 PDCLQ13371 301 aa10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 NFE2Q16621 373 aaPredicted RBP10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 CFAP221Q4G0U5 840 aa10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 PPP1R26Q5T8A7 1209 aaPredicted RBP10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 WSCD1Q658N2 575 aa10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 DENND1BQ6P3S1 775 aa10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 C4orf50Q6ZRC1 276 aa10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 BEND5Q7L4P6 421 aa10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 DCP1BQ8IZD4 617 aaKnown RBP10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 PHOSPHO2Q8TCD6 241 aa10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 ACTRT1Q8TDG2 376 aa10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 DIS3LQ8TF46 1054 aaKnown RBP10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 ARHGEF26Q96DR7 871 aa10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 FUBP3Q96I24 572 aaKnown RBP eCLIP10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 OSBPL9Q96SU4 736 aa10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 TRIM62Q9BVG3 475 aa10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 NRDE2Q9H7Z3 1164 aa10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 OSGEPQ9NPF4 335 aa10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 COMMD8Q9NX08 183 aa10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 HSFX1Q9UBD0 423 aa10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 PRKAG2Q9UGJ0 569 aa10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 ADAM28Q9UKQ2 775 aa10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 COG5Q9UP83 839 aa10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 PCDHA3Q9Y5H8 950 aa10.68□□□□□ -0.7
HMGA1P6-201ENST00000418454 SF3B1O75533 1304 aaKnown RBP eCLIP10.67□□□□□ -0.7
HMGA1P6-201ENST00000418454 TRIM43BA6NCK2 446 aa10.67□□□□□ -0.7
HMGA1P6-201ENST00000418454 CASTOR2A6NHX0 329 aa10.67□□□□□ -0.7
HMGA1P6-201ENST00000418454 M0QYV0 167 aa10.67□□□□□ -0.7
HMGA1P6-201ENST00000418454 NRP1O14786 923 aa10.67□□□□□ -0.7
HMGA1P6-201ENST00000418454 FANCGO15287 622 aa10.67□□□□□ -0.7
HMGA1P6-201ENST00000418454 PROSCO94903 275 aa10.67□□□□□ -0.7
HMGA1P6-201ENST00000418454 ATP1A1P05023 1023 aaKnown RBP10.67□□□□□ -0.7
HMGA1P6-201ENST00000418454 GALTP07902 379 aa10.67□□□□□ -0.7
HMGA1P6-201ENST00000418454 NPR3P17342 541 aa10.67□□□□□ -0.7
HMGA1P6-201ENST00000418454 FGFR3P22607 806 aa10.67□□□□□ -0.7
HMGA1P6-201ENST00000418454 LMO2P25791 158 aa10.67□□□□□ -0.7
HMGA1P6-201ENST00000418454 ALDH7A1P49419 539 aaKnown RBP10.67□□□□□ -0.7
HMGA1P6-201ENST00000418454 TSPY1Q01534 308 aa10.67□□□□□ -0.7
HMGA1P6-201ENST00000418454 YWHAHQ04917 246 aaPredicted RBP10.67□□□□□ -0.7
HMGA1P6-201ENST00000418454 INTS6LQ5JSJ4 861 aaKnown RBP10.67□□□□□ -0.7
HMGA1P6-201ENST00000418454 EFHC1Q5JVL4 640 aa10.67□□□□□ -0.7
HMGA1P6-201ENST00000418454 OVOS1Q6IE37 1185 aa10.67□□□□□ -0.7
HMGA1P6-201ENST00000418454 DNAJC24Q6P3W2 148 aa10.67□□□□□ -0.7
HMGA1P6-201ENST00000418454 MMS22LQ6ZRQ5 1243 aa10.67□□□□□ -0.7
HMGA1P6-201ENST00000418454 ZNF280BQ86YH2 543 aa10.67□□□□□ -0.7
HMGA1P6-201ENST00000418454 RASGEF1CQ8N431 466 aa10.67□□□□□ -0.7
HMGA1P6-201ENST00000418454 C3orf58Q8NDZ4 430 aa10.67□□□□□ -0.7
HMGA1P6-201ENST00000418454 CD101Q93033 1021 aa10.67□□□□□ -0.7
HMGA1P6-201ENST00000418454 ELMO3Q96BJ8 720 aa10.67□□□□□ -0.7
HMGA1P6-201ENST00000418454 TRIM43Q96BQ3 446 aaPredicted RBP10.67□□□□□ -0.7
HMGA1P6-201ENST00000418454 VWCEQ96DN2 955 aa10.67□□□□□ -0.7
HMGA1P6-201ENST00000418454 SCLYQ96I15 445 aa10.67□□□□□ -0.7
HMGA1P6-201ENST00000418454 SYT15Q9BQS2 421 aa10.67□□□□□ -0.7
HMGA1P6-201ENST00000418454 PPP1R12CQ9BZL4 782 aa10.67□□□□□ -0.7
HMGA1P6-201ENST00000418454 SYNCQ9H7C4 482 aa10.67□□□□□ -0.7
HMGA1P6-201ENST00000418454 RRN3Q9NYV6 651 aa10.67□□□□□ -0.7
HMGA1P6-201ENST00000418454 TFR2Q9UP52 801 aa10.67□□□□□ -0.7
HMGA1P6-201ENST00000418454 INPP5FQ9Y2H2 1132 aa10.67□□□□□ -0.7
HMGA1P6-201ENST00000418454 TANC1Q9C0D5 1861 aa10.67□□□□□ -0.7
HMGA1P6-201ENST00000418454 CTAGE15A4D2H0 777 aa10.66□□□□□ -0.7
HMGA1P6-201ENST00000418454 RIOK3O14730 519 aaKnown RBP10.66□□□□□ -0.7
HMGA1P6-201ENST00000418454 PSTPIP1O43586 416 aa10.66□□□□□ -0.7
HMGA1P6-201ENST00000418454 C1RP00736 705 aa10.66□□□□□ -0.7
HMGA1P6-201ENST00000418454 CFHP08603 1231 aa10.66□□□□□ -0.7
HMGA1P6-201ENST00000418454 PDGFRBP09619 1106 aa10.66□□□□□ -0.7
HMGA1P6-201ENST00000418454 FAM200BP0CF97 657 aa10.66□□□□□ -0.7
HMGA1P6-201ENST00000418454 CTAGE8P0CG41 777 aa10.66□□□□□ -0.7
HMGA1P6-201ENST00000418454 CTNNA1P35221 906 aaKnown RBP10.66□□□□□ -0.7
HMGA1P6-201ENST00000418454 PCK1P35558 622 aa10.66□□□□□ -0.7
HMGA1P6-201ENST00000418454 MAGEA11P43364 429 aa10.66□□□□□ -0.7
HMGA1P6-201ENST00000418454 OR1G1P47890 313 aa10.66□□□□□ -0.7
HMGA1P6-201ENST00000418454 PEX5P50542 639 aa10.66□□□□□ -0.7
HMGA1P6-201ENST00000418454 PSMC1P62191 440 aaKnown RBP10.66□□□□□ -0.7
HMGA1P6-201ENST00000418454 SLC6A3Q01959 620 aa10.66□□□□□ -0.7
HMGA1P6-201ENST00000418454 GOLGA7BQ2TAP0 167 aa10.66□□□□□ -0.7
HMGA1P6-201ENST00000418454 PTPN20Q4JDL3 420 aa10.66□□□□□ -0.7
HMGA1P6-201ENST00000418454 GLE1Q53GS7 698 aaKnown RBP10.66□□□□□ -0.7
HMGA1P6-201ENST00000418454 PSRC1Q6PGN9 363 aaPredicted RBP10.66□□□□□ -0.7
HMGA1P6-201ENST00000418454 DCUN1D2Q6PH85 259 aa10.66□□□□□ -0.7
HMGA1P6-201ENST00000418454 VSTM1Q6UX27 236 aa10.66□□□□□ -0.7
HMGA1P6-201ENST00000418454 ANKS3Q6ZW76 656 aa10.66□□□□□ -0.7
HMGA1P6-201ENST00000418454 POLNQ7Z5Q5 900 aa10.66□□□□□ -0.7
HMGA1P6-201ENST00000418454 CTAGE6Q86UF2 777 aa10.66□□□□□ -0.7
HMGA1P6-201ENST00000418454 OSTM1Q86WC4 334 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms