RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 RFWD2Q8NHY2 731 aa12.49□□□□□ -0.41
LIMK1-202ENST00000418310 TMEM174Q8WUU8 243 aa12.49□□□□□ -0.41
LIMK1-202ENST00000418310 NIF3L1Q9GZT8 377 aa12.49□□□□□ -0.41
LIMK1-202ENST00000418310 DHX33Q9H6R0 707 aaKnown RBP12.49□□□□□ -0.41
LIMK1-202ENST00000418310 NOP53Q9NZM5 478 aaKnown RBP12.49□□□□□ -0.41
LIMK1-202ENST00000418310 CCDC195A0A1B0GUA6 201 aa12.49□□□□□ -0.41
LIMK1-202ENST00000418310 LRCH4O75427 683 aa12.49□□□□□ -0.41
LIMK1-202ENST00000418310 UNC5CO95185 931 aa12.49□□□□□ -0.41
LIMK1-202ENST00000418310 PRKCBP05771 671 aa12.49□□□□□ -0.41
LIMK1-202ENST00000418310 RPL22P35268 128 aaKnown RBP12.49□□□□□ -0.41
LIMK1-202ENST00000418310 CLCN3P51790 818 aa12.49□□□□□ -0.41
LIMK1-202ENST00000418310 IRX4P78413 519 aa12.49□□□□□ -0.41
LIMK1-202ENST00000418310 LMNB2Q03252 620 aa12.49□□□□□ -0.41
LIMK1-202ENST00000418310 LRRC6Q86X45 466 aa12.49□□□□□ -0.41
LIMK1-202ENST00000418310 NETO2Q8NC67 525 aa12.49□□□□□ -0.41
LIMK1-202ENST00000418310 PPP1R13LQ8WUF5 828 aa12.49□□□□□ -0.41
LIMK1-202ENST00000418310 CPT1BQ92523 772 aa12.49□□□□□ -0.41
LIMK1-202ENST00000418310 PRR11Q96HE9 360 aaPredicted RBP12.49□□□□□ -0.41
LIMK1-202ENST00000418310 CPXM1Q96SM3 734 aa12.49□□□□□ -0.41
LIMK1-202ENST00000418310 PCYT2Q99447 389 aa12.49□□□□□ -0.41
LIMK1-202ENST00000418310 PSMC3IPQ9P2W1 217 aaPredicted RBP12.49□□□□□ -0.41
LIMK1-202ENST00000418310 XPO7Q9UIA9 1087 aaKnown RBP12.49□□□□□ -0.41
LIMK1-202ENST00000418310 ZMYND8Q9ULU4 1186 aaPredicted RBP12.49□□□□□ -0.41
LIMK1-202ENST00000418310 HEY1Q9Y5J3 304 aa12.49□□□□□ -0.41
LIMK1-202ENST00000418310 MYH9P35579 1960 aaKnown RBP12.49□□□□□ -0.41
LIMK1-202ENST00000418310 CFAP69A5D8W1 941 aa12.49□□□□□ -0.41
LIMK1-202ENST00000418310 H0YCG3 227 aa12.49□□□□□ -0.41
LIMK1-202ENST00000418310 LDHAP00338 332 aaKnown RBP12.49□□□□□ -0.41
LIMK1-202ENST00000418310 CPA2P48052 419 aa12.49□□□□□ -0.41
LIMK1-202ENST00000418310 RGS7P49802 495 aa12.49□□□□□ -0.41
LIMK1-202ENST00000418310 LONP2Q86WA8 852 aa12.49□□□□□ -0.41
LIMK1-202ENST00000418310 ARFGAP1Q8N6T3 406 aa12.49□□□□□ -0.41
LIMK1-202ENST00000418310 GBP7Q8N8V2 638 aaPredicted RBP12.49□□□□□ -0.41
LIMK1-202ENST00000418310 TTC8Q8TAM2 541 aa12.49□□□□□ -0.41
LIMK1-202ENST00000418310 TWNKQ96RR1 684 aa12.49□□□□□ -0.41
LIMK1-202ENST00000418310 C15orf41Q9Y2V0 281 aa12.49□□□□□ -0.41
LIMK1-202ENST00000418310 NUMBLQ9Y6R0 609 aa12.49□□□□□ -0.41
LIMK1-202ENST00000418310 SPDYE16A6NNV3 312 aaPredicted RBP12.48□□□□□ -0.41
LIMK1-202ENST00000418310 ADCY3O60266 1144 aa12.48□□□□□ -0.41
LIMK1-202ENST00000418310 ENTPD5O75356 428 aa12.48□□□□□ -0.41
LIMK1-202ENST00000418310 RBP3P10745 1247 aa12.48□□□□□ -0.41
LIMK1-202ENST00000418310 PAX7P23759 505 aa12.48□□□□□ -0.41
LIMK1-202ENST00000418310 EIF3EP60228 445 aaKnown RBP12.48□□□□□ -0.41
LIMK1-202ENST00000418310 ZBTB16Q05516 673 aa12.48□□□□□ -0.41
LIMK1-202ENST00000418310 OASLQ15646 514 aaKnown RBP12.48□□□□□ -0.41
LIMK1-202ENST00000418310 DUOXA2Q1HG44 320 aa12.48□□□□□ -0.41
LIMK1-202ENST00000418310 C15orf59Q2T9L4 293 aaPredicted RBP12.48□□□□□ -0.41
LIMK1-202ENST00000418310 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.48□□□□□ -0.41
LIMK1-202ENST00000418310 TEX2Q8IWB9 1127 aa12.48□□□□□ -0.41
LIMK1-202ENST00000418310 REPS2Q8NFH8 660 aa12.48□□□□□ -0.41
LIMK1-202ENST00000418310 MICAL1Q8TDZ2 1067 aa12.48□□□□□ -0.41
LIMK1-202ENST00000418310 ZNF75CPQ92670 426 aaPredicted RBP12.48□□□□□ -0.41
LIMK1-202ENST00000418310 COPS5Q92905 334 aa12.48□□□□□ -0.41
LIMK1-202ENST00000418310 PTPRN2Q92932 1015 aa12.48□□□□□ -0.41
LIMK1-202ENST00000418310 CDHR1Q96JP9 859 aa12.48□□□□□ -0.41
LIMK1-202ENST00000418310 SMYD3Q9H7B4 428 aa12.48□□□□□ -0.41
LIMK1-202ENST00000418310 SLC24A3Q9HC58 644 aa12.48□□□□□ -0.41
LIMK1-202ENST00000418310 ARHGEF3Q9NR81 526 aa12.48□□□□□ -0.41
LIMK1-202ENST00000418310 EURLQ9NYK6 297 aa12.48□□□□□ -0.41
LIMK1-202ENST00000418310 GINS2Q9Y248 185 aa12.48□□□□□ -0.41
LIMK1-202ENST00000418310 H7C0C1 242 aa12.48□□□□□ -0.41
LIMK1-202ENST00000418310 ARL2P36404 184 aa12.48□□□□□ -0.41
LIMK1-202ENST00000418310 ATP5OP48047 213 aa12.48□□□□□ -0.41
LIMK1-202ENST00000418310 HSDL1Q3SXM5 330 aa12.48□□□□□ -0.41
LIMK1-202ENST00000418310 FAM102AQ5T9C2 384 aaPredicted RBP12.48□□□□□ -0.41
LIMK1-202ENST00000418310 NLRP9Q7RTR0 991 aa12.48□□□□□ -0.41
LIMK1-202ENST00000418310 IGDCC3Q8IVU1 814 aa12.48□□□□□ -0.41
LIMK1-202ENST00000418310 BRSK2Q8IWQ3 736 aa12.48□□□□□ -0.41
LIMK1-202ENST00000418310 SPATA18Q8TC71 538 aa12.48□□□□□ -0.41
LIMK1-202ENST00000418310 ZBED3Q96IU2 234 aaPredicted RBP12.48□□□□□ -0.41
LIMK1-202ENST00000418310 PIWIL1Q96J94 861 aaKnown RBP12.48□□□□□ -0.41
LIMK1-202ENST00000418310 ZNF570Q96NI8 536 aa12.48□□□□□ -0.41
LIMK1-202ENST00000418310 FAM111AQ96PZ2 611 aa12.48□□□□□ -0.41
LIMK1-202ENST00000418310 WDR83Q9BRX9 315 aaKnown RBP12.48□□□□□ -0.41
LIMK1-202ENST00000418310 FBXO6Q9NRD1 293 aaPredicted RBP12.48□□□□□ -0.41
LIMK1-202ENST00000418310 NR2E3Q9Y5X4 410 aa12.48□□□□□ -0.41
LIMK1-202ENST00000418310 USH1CQ9Y6N9 552 aa12.48□□□□□ -0.41
LIMK1-202ENST00000418310 M0QYV0 167 aa12.47□□□□□ -0.41
LIMK1-202ENST00000418310 NOP56O00567 594 aaKnown RBP12.47□□□□□ -0.41
LIMK1-202ENST00000418310 MAFGO15525 162 aa12.47□□□□□ -0.41
LIMK1-202ENST00000418310 KITP10721 976 aa12.47□□□□□ -0.41
LIMK1-202ENST00000418310 MORF4L2Q15014 288 aa12.47□□□□□ -0.41
LIMK1-202ENST00000418310 PLEKHG4Q58EX7 1191 aa12.47□□□□□ -0.41
LIMK1-202ENST00000418310 TREML2Q5T2D2 321 aa12.47□□□□□ -0.41
LIMK1-202ENST00000418310 DARS2Q6PI48 645 aaKnown RBP12.47□□□□□ -0.41
LIMK1-202ENST00000418310 CCDC125Q86Z20 511 aa12.47□□□□□ -0.41
LIMK1-202ENST00000418310 MAP3K20Q9NYL2 800 aaKnown RBP12.47□□□□□ -0.41
LIMK1-202ENST00000418310 MARCOQ9UEW3 520 aaPredicted RBP12.47□□□□□ -0.41
LIMK1-202ENST00000418310 ZFP69BQ9UJL9 534 aa12.47□□□□□ -0.41
LIMK1-202ENST00000418310 EDF1O60869 148 aaKnown RBP12.47□□□□□ -0.41
LIMK1-202ENST00000418310 ARL4CP56559 192 aa12.47□□□□□ -0.41
LIMK1-202ENST00000418310 GEMIN4P57678 1058 aaKnown RBP12.47□□□□□ -0.41
LIMK1-202ENST00000418310 CLDN10P78369 228 aa12.47□□□□□ -0.41
LIMK1-202ENST00000418310 GHRHRQ02643 423 aa12.47□□□□□ -0.41
LIMK1-202ENST00000418310 MAP3K10Q02779 954 aa12.47□□□□□ -0.41
LIMK1-202ENST00000418310 LAMTOR4Q0VGL1 99 aa12.47□□□□□ -0.41
LIMK1-202ENST00000418310 GJC2Q5T442 439 aaPredicted RBP12.47□□□□□ -0.41
LIMK1-202ENST00000418310 VCPIP1Q96JH7 1222 aa12.47□□□□□ -0.41
LIMK1-202ENST00000418310 MRPL4Q9BYD3 311 aaKnown RBP12.47□□□□□ -0.41
LIMK1-202ENST00000418310 AS3MTQ9HBK9 375 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms