RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 MAGEC2Q9UBF1 373 aaPredicted RBP26.74■■□□□ 1.87
HLA-C-204ENST00000415537 OBSL1O75147 1896 aa26.74■■□□□ 1.87
HLA-C-204ENST00000415537 ARNTLO00327 626 aa26.73■■□□□ 1.87
HLA-C-204ENST00000415537 PDGFRBP09619 1106 aa26.73■■□□□ 1.87
HLA-C-204ENST00000415537 WARSP23381 471 aaKnown RBP26.73■■□□□ 1.87
HLA-C-204ENST00000415537 LMO2P25791 158 aa26.73■■□□□ 1.87
HLA-C-204ENST00000415537 MLLT6P55198 1093 aaPredicted RBP26.73■■□□□ 1.87
HLA-C-204ENST00000415537 WDR72Q3MJ13 1102 aa26.73■■□□□ 1.87
HLA-C-204ENST00000415537 C1orf228Q6PIY5 440 aa26.73■■□□□ 1.87
HLA-C-204ENST00000415537 SCN4BQ8IWT1 228 aa26.73■■□□□ 1.87
HLA-C-204ENST00000415537 CMTM8Q8IZV2 173 aa26.73■■□□□ 1.87
HLA-C-204ENST00000415537 CELF5Q8N6W0 485 aaKnown RBP26.73■■□□□ 1.87
HLA-C-204ENST00000415537 MAB21L3Q8N8X9 362 aa26.73■■□□□ 1.87
HLA-C-204ENST00000415537 STKLD1Q8NE28 680 aa26.73■■□□□ 1.87
HLA-C-204ENST00000415537 MRPS31Q92665 395 aaKnown RBP26.73■■□□□ 1.87
HLA-C-204ENST00000415537 MSANTD3Q96H12 275 aa26.73■■□□□ 1.87
HLA-C-204ENST00000415537 THG1LQ9NWX6 298 aaKnown RBP26.73■■□□□ 1.87
HLA-C-204ENST00000415537 R4GN57 208 aa26.73■■□□□ 1.87
HLA-C-204ENST00000415537 SHISA7A6NL88 538 aa26.72■■□□□ 1.87
HLA-C-204ENST00000415537 ATP2C2O75185 946 aa26.72■■□□□ 1.87
HLA-C-204ENST00000415537 CLSTN1O94985 981 aa26.72■■□□□ 1.87
HLA-C-204ENST00000415537 PRAMEF12O95522 483 aa26.72■■□□□ 1.87
HLA-C-204ENST00000415537 RPN1P04843 607 aaKnown RBP26.72■■□□□ 1.87
HLA-C-204ENST00000415537 CCNE1P24864 410 aa26.72■■□□□ 1.87
HLA-C-204ENST00000415537 GNL1P36915 607 aaPredicted RBP26.72■■□□□ 1.87
HLA-C-204ENST00000415537 NDUFA8P51970 172 aa26.72■■□□□ 1.87
HLA-C-204ENST00000415537 PSMC1P62191 440 aaKnown RBP26.72■■□□□ 1.87
HLA-C-204ENST00000415537 ZNF516Q92618 1163 aa26.72■■□□□ 1.87
HLA-C-204ENST00000415537 C8orf33Q9H7E9 229 aaPredicted RBP26.72■■□□□ 1.87
HLA-C-204ENST00000415537 FBXO4Q9UKT5 387 aa26.72■■□□□ 1.87
HLA-C-204ENST00000415537 ZFHX2Q9C0A1 2572 aaPredicted RBP26.72■■□□□ 1.87
HLA-C-204ENST00000415537 SLC38A8A6NNN8 435 aa26.71■■□□□ 1.87
HLA-C-204ENST00000415537 ATICP31939 592 aa26.71■■□□□ 1.87
HLA-C-204ENST00000415537 MAGEA11P43364 429 aa26.71■■□□□ 1.87
HLA-C-204ENST00000415537 AP3M2P53677 418 aa26.71■■□□□ 1.87
HLA-C-204ENST00000415537 PLCB2Q00722 1185 aa26.71■■□□□ 1.87
HLA-C-204ENST00000415537 CYP27A1Q02318 531 aa26.71■■□□□ 1.87
HLA-C-204ENST00000415537 CSTF1Q05048 431 aaKnown RBP26.71■■□□□ 1.87
HLA-C-204ENST00000415537 FZD5Q13467 585 aa26.71■■□□□ 1.87
HLA-C-204ENST00000415537 CCDC142Q17RM4 750 aa26.71■■□□□ 1.87
HLA-C-204ENST00000415537 TMEM150AQ86TG1 271 aa26.71■■□□□ 1.87
HLA-C-204ENST00000415537 MAML2Q8IZL2 1156 aaPredicted RBP26.71■■□□□ 1.87
HLA-C-204ENST00000415537 OR6B3Q8NGW1 331 aa26.71■■□□□ 1.87
HLA-C-204ENST00000415537 SYAP1Q96A49 352 aaPredicted RBP26.71■■□□□ 1.87
HLA-C-204ENST00000415537 TRMT2BQ96GJ1 504 aaKnown RBP26.71■■□□□ 1.87
HLA-C-204ENST00000415537 ZFYVE19Q96K21 471 aa26.71■■□□□ 1.87
HLA-C-204ENST00000415537 LRRC3BQ96PB8 259 aa26.71■■□□□ 1.87
HLA-C-204ENST00000415537 SMG9Q9H0W8 520 aaKnown RBP26.71■■□□□ 1.87
HLA-C-204ENST00000415537 FANCMQ8IYD8 2048 aa26.7■■□□□ 1.87
HLA-C-204ENST00000415537 SOBPA7XYQ1 873 aa26.7■■□□□ 1.86
HLA-C-204ENST00000415537 PDXKO00764 312 aa26.7■■□□□ 1.86
HLA-C-204ENST00000415537 TACC1O75410 805 aa26.7■■□□□ 1.86
HLA-C-204ENST00000415537 NOL4O94818 638 aa26.7■■□□□ 1.86
HLA-C-204ENST00000415537 KIF20AO95235 890 aa26.7■■□□□ 1.86
HLA-C-204ENST00000415537 FAM163BP0C2L3 166 aa26.7■■□□□ 1.86
HLA-C-204ENST00000415537 CASP4P49662 377 aa26.7■■□□□ 1.86
HLA-C-204ENST00000415537 BIRC3Q13489 604 aa26.7■■□□□ 1.86
HLA-C-204ENST00000415537 ZNF528Q3MIS6 628 aa26.7■■□□□ 1.86
HLA-C-204ENST00000415537 TXNDC8Q6A555 127 aa26.7■■□□□ 1.86
HLA-C-204ENST00000415537 SLC9A9Q8IVB4 645 aa26.7■■□□□ 1.86
HLA-C-204ENST00000415537 FSIP1Q8NA03 581 aa26.7■■□□□ 1.86
HLA-C-204ENST00000415537 MYLPFQ96A32 169 aa26.7■■□□□ 1.86
HLA-C-204ENST00000415537 MRPL45Q9BRJ2 306 aaKnown RBP26.7■■□□□ 1.86
HLA-C-204ENST00000415537 LMAN1LQ9HAT1 526 aa26.7■■□□□ 1.86
HLA-C-204ENST00000415537 NXF1Q9UBU9 619 aaKnown RBP26.7■■□□□ 1.86
HLA-C-204ENST00000415537 F5P12259 2224 aa26.69■■□□□ 1.86
HLA-C-204ENST00000415537 FAM237AA0A1B0GTK4 181 aa26.69■■□□□ 1.86
HLA-C-204ENST00000415537 A0A1W2PQ27 194 aa26.69■■□□□ 1.86
HLA-C-204ENST00000415537 A0A1W2PQ64 194 aa26.69■■□□□ 1.86
HLA-C-204ENST00000415537 A0A1W2PQD8 194 aa26.69■■□□□ 1.86
HLA-C-204ENST00000415537 STAU1O95793 577 aaKnown RBP26.69■■□□□ 1.86
HLA-C-204ENST00000415537 LMNAP02545 664 aaKnown RBP26.69■■□□□ 1.86
HLA-C-204ENST00000415537 GRIK1P39086 918 aa26.69■■□□□ 1.86
HLA-C-204ENST00000415537 MYL6P60660 151 aa26.69■■□□□ 1.86
HLA-C-204ENST00000415537 BECN1Q14457 450 aa26.69■■□□□ 1.86
HLA-C-204ENST00000415537 VSTM1Q6UX27 236 aa26.69■■□□□ 1.86
HLA-C-204ENST00000415537 TTC8Q8TAM2 541 aa26.69■■□□□ 1.86
HLA-C-204ENST00000415537 PARD3BQ8TEW8 1205 aa26.69■■□□□ 1.86
HLA-C-204ENST00000415537 MYRFLQ96LU7 910 aa26.69■■□□□ 1.86
HLA-C-204ENST00000415537 GZF1Q9H116 711 aaPredicted RBP26.69■■□□□ 1.86
HLA-C-204ENST00000415537 KCTD10Q9H3F6 313 aa26.69■■□□□ 1.86
HLA-C-204ENST00000415537 CRTAC1Q9NQ79 661 aa26.69■■□□□ 1.86
HLA-C-204ENST00000415537 TDP1Q9NUW8 608 aa26.69■■□□□ 1.86
HLA-C-204ENST00000415537 DMAC2Q9NW81 257 aa26.69■■□□□ 1.86
HLA-C-204ENST00000415537 GTSE1Q9NYZ3 720 aa26.69■■□□□ 1.86
HLA-C-204ENST00000415537 KIF26AQ9ULI4 1882 aaPredicted RBP26.69■■□□□ 1.86
HLA-C-204ENST00000415537 GREB1Q4ZG55 1949 aa26.69■■□□□ 1.86
HLA-C-204ENST00000415537 VPS13AQ96RL7 3174 aa26.68■■□□□ 1.86
HLA-C-204ENST00000415537 CALUO43852 315 aaPredicted RBP26.68■■□□□ 1.86
HLA-C-204ENST00000415537 NR3C1P04150 777 aa26.68■■□□□ 1.86
HLA-C-204ENST00000415537 BDNFP23560 247 aa26.68■■□□□ 1.86
HLA-C-204ENST00000415537 ANXA13P27216 316 aa26.68■■□□□ 1.86
HLA-C-204ENST00000415537 MON1AQ86VX9 555 aa26.68■■□□□ 1.86
HLA-C-204ENST00000415537 RALGPS2Q86X27 583 aaPredicted RBP26.68■■□□□ 1.86
HLA-C-204ENST00000415537 ADSSL1Q8N142 457 aa26.68■■□□□ 1.86
HLA-C-204ENST00000415537 ZNF687Q8N1G0 1237 aa26.68■■□□□ 1.86
HLA-C-204ENST00000415537 MYCBPAPQ8TBZ2 947 aa26.68■■□□□ 1.86
HLA-C-204ENST00000415537 TMEM174Q8WUU8 243 aa26.68■■□□□ 1.86
HLA-C-204ENST00000415537 IER2Q9BTL4 223 aa26.68■■□□□ 1.86
HLA-C-204ENST00000415537 KIF9Q9HAQ2 790 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms