RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 STXBP5LQ9Y2K9 1186 aa7.04□□□□□ -1.28
HDAC8-211ENST00000415409 GIT1Q9Y2X7 761 aa7.04□□□□□ -1.28
HDAC8-211ENST00000415409 SNX9Q9Y5X1 595 aa7.04□□□□□ -1.28
HDAC8-211ENST00000415409 ALG6Q9Y672 507 aa7.04□□□□□ -1.28
HDAC8-211ENST00000415409 ARID2Q68CP9 1835 aa7.04□□□□□ -1.28
HDAC8-211ENST00000415409 TNRC18O15417 2968 aaPredicted RBP7.03□□□□□ -1.28
HDAC8-211ENST00000415409 FAM170AA1A519 330 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 KPNA7A9QM74 516 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 MYO1FO00160 1098 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 ARVCFO00192 962 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 PIRO00625 290 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 CEP104O60308 925 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 HUS1O60921 280 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 ZNF623O75123 536 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 FAM163BP0C2L3 166 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 BMP2P12643 396 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 MMP8P22894 467 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 RRM1P23921 792 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 MCM3P25205 808 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 LRPAP1P30533 357 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 CDH5P33151 784 aaPredicted RBP7.03□□□□□ -1.28
HDAC8-211ENST00000415409 SLC1A1P43005 524 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 TAF6P49848 677 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 NDST1P52848 882 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 RAD23BP54727 409 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 SNX16P57768 344 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 TAP1Q03518 808 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 INCA1Q0VD86 236 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 LPIN1Q14693 890 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 MESDQ14696 234 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 NAA30Q147X3 362 aaPredicted RBP7.03□□□□□ -1.28
HDAC8-211ENST00000415409 CNGA2Q16280 664 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 QPCTQ16769 361 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 TRIM71Q2Q1W2 868 aaKnown RBP7.03□□□□□ -1.28
HDAC8-211ENST00000415409 ZNF618Q5T7W0 954 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 DENND1BQ6P3S1 775 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 DNAJC24Q6P3W2 148 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 MMS22LQ6ZRQ5 1243 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 FAM43BQ6ZT52 329 aaPredicted RBP7.03□□□□□ -1.28
HDAC8-211ENST00000415409 MON1BQ7L1V2 547 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 MTERF4Q7Z6M4 381 aaKnown RBP7.03□□□□□ -1.28
HDAC8-211ENST00000415409 UNC93AQ86WB7 457 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 SLC43A3Q8NBI5 491 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 SLC4A11Q8NBS3 891 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 OR6B3Q8NGW1 331 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 WHAMMQ8TF30 809 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 TFAP2BQ92481 460 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 HES6Q96HZ4 224 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 NAP1L3Q99457 506 aaPredicted RBP7.03□□□□□ -1.28
HDAC8-211ENST00000415409 C11orf70Q9BRQ4 267 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 TRAIPQ9BWF2 469 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 ELOVL4Q9GZR5 314 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 MIS12Q9H081 205 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 SDCBP2Q9H190 292 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 TRPV6Q9H1D0 765 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 SNX25Q9H3E2 840 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 SYNCQ9H7C4 482 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 AGO3Q9H9G7 860 aaKnown RBP7.03□□□□□ -1.28
HDAC8-211ENST00000415409 LIMD1Q9UGP4 676 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 ANAPC7Q9UJX3 599 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 STRIP2Q9ULQ0 834 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 PACSIN2Q9UNF0 486 aaPredicted RBP7.03□□□□□ -1.28
HDAC8-211ENST00000415409 COG5Q9UP83 839 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 PTPN22Q9Y2R2 807 aa7.03□□□□□ -1.28
HDAC8-211ENST00000415409 DOCK5Q9H7D0 1870 aa7.02□□□□□ -1.28
HDAC8-211ENST00000415409 A0A0U1RQF3 1178 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 CCDC66A2RUB6 948 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 ARL5CA6NH57 179 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 A8MXQ7 604 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 M0QYV0 167 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 PGRMC1O00264 195 aaKnown RBP7.02□□□□□ -1.29
HDAC8-211ENST00000415409 DNM1LO00429 736 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 PPEF2O14830 753 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 MICAL2O94851 1124 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 TFRCP02786 760 aaKnown RBP7.02□□□□□ -1.29
HDAC8-211ENST00000415409 THP07101 528 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 CKBP12277 381 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 COMTP21964 271 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 PAX3P23760 479 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 FSHRP23945 695 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 CTNNA2P26232 953 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 RPL9P32969 192 aaKnown RBP7.02□□□□□ -1.29
HDAC8-211ENST00000415409 MLH1P40692 756 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 MAMLD1Q13495 774 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 BFSP2Q13515 415 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 DSC3Q14574 896 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 PTPROQ16827 1216 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 GLE1Q53GS7 698 aaKnown RBP7.02□□□□□ -1.29
HDAC8-211ENST00000415409 C4orf48Q5BLP8 95 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 PLEKHA7Q6IQ23 1121 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 DCUN1D2Q6PH85 259 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 VASH1Q7L8A9 365 aaPredicted RBP7.02□□□□□ -1.29
HDAC8-211ENST00000415409 DPH6Q7L8W6 267 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 TMEM130Q8N3G9 435 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 PDCL2Q8N4E4 241 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 MMGT1Q8N4V1 131 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 TOP6BLQ8N6T0 577 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 RNF169Q8NCN4 708 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 C1orf131Q8NDD1 294 aaKnown RBP7.02□□□□□ -1.29
HDAC8-211ENST00000415409 APPL2Q8NEU8 664 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms