RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 NUCKS1Q9H1E3 243 aaKnown RBP13.93□□□□□ -0.18
CNOT4-204ENST00000414802 HAUS4Q9H6D7 363 aa13.93□□□□□ -0.18
CNOT4-204ENST00000414802 ABI2Q9NYB9 513 aaPredicted RBP13.93□□□□□ -0.18
CNOT4-204ENST00000414802 MTMR11A4FU01 709 aa13.92□□□□□ -0.18
CNOT4-204ENST00000414802 O00370 1275 aa13.92□□□□□ -0.18
CNOT4-204ENST00000414802 PTMAP06454 111 aaKnown RBP13.92□□□□□ -0.18
CNOT4-204ENST00000414802 VDRP11473 427 aa13.92□□□□□ -0.18
CNOT4-204ENST00000414802 CHRNB2P17787 502 aa13.92□□□□□ -0.18
CNOT4-204ENST00000414802 NDUFV1P49821 464 aa13.92□□□□□ -0.18
CNOT4-204ENST00000414802 CCDC173Q0VFZ6 552 aa13.92□□□□□ -0.18
CNOT4-204ENST00000414802 ZNF571Q7Z3V5 609 aaPredicted RBP13.92□□□□□ -0.18
CNOT4-204ENST00000414802 DCP1BQ8IZD4 617 aaKnown RBP13.92□□□□□ -0.18
CNOT4-204ENST00000414802 FUKQ8N0W3 1084 aa13.92□□□□□ -0.18
CNOT4-204ENST00000414802 OLIG1Q8TAK6 271 aa13.92□□□□□ -0.18
CNOT4-204ENST00000414802 MYCBPAPQ8TBZ2 947 aa13.92□□□□□ -0.18
CNOT4-204ENST00000414802 ZNF606Q8WXB4 792 aa13.92□□□□□ -0.18
CNOT4-204ENST00000414802 DDX1Q92499 740 aaKnown RBP13.92□□□□□ -0.18
CNOT4-204ENST00000414802 SYN2Q92777 582 aaPredicted RBP13.92□□□□□ -0.18
CNOT4-204ENST00000414802 CYFIP2Q96F07 1278 aa13.92□□□□□ -0.18
CNOT4-204ENST00000414802 KLHL5Q96PQ7 755 aa13.92□□□□□ -0.18
CNOT4-204ENST00000414802 CHP1Q99653 195 aa13.92□□□□□ -0.18
CNOT4-204ENST00000414802 RXFP1Q9HBX9 757 aa13.92□□□□□ -0.18
CNOT4-204ENST00000414802 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.92□□□□□ -0.18
CNOT4-204ENST00000414802 SEPT11Q9NVA2 429 aaKnown RBP13.92□□□□□ -0.18
CNOT4-204ENST00000414802 ARHGAP20Q9P2F6 1191 aa13.92□□□□□ -0.18
CNOT4-204ENST00000414802 TSPAN16Q9UKR8 245 aa13.92□□□□□ -0.18
CNOT4-204ENST00000414802 ANAPC1Q9H1A4 1944 aa13.92□□□□□ -0.18
CNOT4-204ENST00000414802 M0QYV0 167 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 SOAT2O75908 522 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 MICAL2O94851 1124 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 SERPING1P05155 500 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 BDNFP23560 247 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 HNRNPH3P31942 346 aaKnown RBP13.91□□□□□ -0.18
CNOT4-204ENST00000414802 PRKCIP41743 596 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 CACNA2D1P54289 1103 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 GSDMDP57764 484 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 BPIFB4P59827 614 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 FMO1Q01740 532 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 CREMQ03060 361 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 BMS1Q14692 1282 aaKnown RBP13.91□□□□□ -0.18
CNOT4-204ENST00000414802 GRIN2CQ14957 1233 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 TSR1Q2NL82 804 aaKnown RBP13.91□□□□□ -0.18
CNOT4-204ENST00000414802 DENND1BQ6P3S1 775 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 PAQR9Q6ZVX9 377 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 MRPL43Q8N983 215 aaKnown RBP13.91□□□□□ -0.18
CNOT4-204ENST00000414802 ATAD1Q8NBU5 361 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 PANX2Q96RD6 677 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 DNAI2Q9GZS0 605 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 CRISPLD1Q9H336 500 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 NGRNQ9NPE2 291 aaKnown RBP13.91□□□□□ -0.18
CNOT4-204ENST00000414802 KRT82Q9NSB4 513 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 TMEM30AQ9NV96 361 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 ZNHIT6Q9NWK9 470 aaKnown RBP13.91□□□□□ -0.18
CNOT4-204ENST00000414802 FNIP2Q9P278 1114 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.91□□□□□ -0.18
CNOT4-204ENST00000414802 SSX2IPQ9Y2D8 614 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 PER2O15055 1255 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 CCDC172P0C7W6 258 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 SPATA31D3P0C874 917 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 CYP2F1P24903 491 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 KLRC2P26717 231 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 EIF4A3P38919 411 aaKnown RBP13.91□□□□□ -0.18
CNOT4-204ENST00000414802 ADCY1Q08828 1119 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 GPR17Q13304 367 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 MEA1Q16626 185 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 ZNF697Q5TEC3 545 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 ARHGAP17Q68EM7 881 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 SPATA31D4Q6ZUB0 917 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 RBM23Q86U06 439 aaKnown RBP13.91□□□□□ -0.18
CNOT4-204ENST00000414802 TTC30AQ86WT1 665 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 SPATA2LQ8IUW3 424 aaPredicted RBP13.91□□□□□ -0.18
CNOT4-204ENST00000414802 FMNL3Q8IVF7 1028 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 UBA3Q8TBC4 463 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 AGPAT1Q99943 283 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 EMILIN2Q9BXX0 1053 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 LMAN2LQ9H0V9 348 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 PCDHB5Q9Y5E4 795 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 IRAK3Q9Y616 596 aa13.91□□□□□ -0.18
CNOT4-204ENST00000414802 AP1G2O75843 785 aa13.9□□□□□ -0.18
CNOT4-204ENST00000414802 SEC24AO95486 1093 aa13.9□□□□□ -0.18
CNOT4-204ENST00000414802 ADH1AP07327 375 aa13.9□□□□□ -0.18
CNOT4-204ENST00000414802 GPR15P49685 360 aa13.9□□□□□ -0.18
CNOT4-204ENST00000414802 CDR2Q01850 454 aa13.9□□□□□ -0.18
CNOT4-204ENST00000414802 RAB33AQ14088 237 aa13.9□□□□□ -0.18
CNOT4-204ENST00000414802 MAPRE1Q15691 268 aaKnown RBP13.9□□□□□ -0.18
CNOT4-204ENST00000414802 LCLAT1Q6UWP7 414 aa13.9□□□□□ -0.18
CNOT4-204ENST00000414802 C4orf50Q6ZRC1 276 aa13.9□□□□□ -0.18
CNOT4-204ENST00000414802 TMEM139Q8IV31 216 aa13.9□□□□□ -0.18
CNOT4-204ENST00000414802 GPR65Q8IYL9 337 aa13.9□□□□□ -0.18
CNOT4-204ENST00000414802 STKLD1Q8NE28 680 aa13.9□□□□□ -0.18
CNOT4-204ENST00000414802 MRPL38Q96DV4 380 aaKnown RBP13.9□□□□□ -0.18
CNOT4-204ENST00000414802 PCDHB18PQ96TA0 734 aa13.9□□□□□ -0.18
CNOT4-204ENST00000414802 HNRNPABQ99729 332 aaKnown RBP13.9□□□□□ -0.18
CNOT4-204ENST00000414802 SYT11Q9BT88 431 aa13.9□□□□□ -0.18
CNOT4-204ENST00000414802 OXCT2Q9BYC2 517 aaPredicted RBP13.9□□□□□ -0.18
CNOT4-204ENST00000414802 PDCL3Q9H2J4 239 aa13.9□□□□□ -0.18
CNOT4-204ENST00000414802 SLC27A5Q9Y2P5 690 aa13.9□□□□□ -0.18
CNOT4-204ENST00000414802 ATP8B3O60423 1300 aa13.9□□□□□ -0.19
CNOT4-204ENST00000414802 NOTCH4Q99466 2003 aa13.89□□□□□ -0.19
CNOT4-204ENST00000414802 TMEM265A0A087WTH1 108 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms