RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 MAP4K2Q12851 820 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 STRN3Q13033 797 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 GRB10Q13322 594 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 SNW1Q13573 536 aaKnown RBP5.38□□□□□ -1.55
VPS41-205ENST00000414632 CAPSQ13938 189 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 DHX8Q14562 1220 aaKnown RBP5.38□□□□□ -1.55
VPS41-205ENST00000414632 KARSQ15046 597 aaKnown RBP5.38□□□□□ -1.55
VPS41-205ENST00000414632 PCBP1Q15365 356 aaKnown RBP eCLIP5.38□□□□□ -1.55
VPS41-205ENST00000414632 KRT79Q5XKE5 535 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 ZNF385CQ66K41 422 aaPredicted RBP5.38□□□□□ -1.55
VPS41-205ENST00000414632 HAUS3Q68CZ6 603 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 USP49Q70CQ1 688 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 CATSPER4Q7RTX7 472 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 CABP7Q86V35 215 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 CDR2LQ86X02 465 aaPredicted RBP5.38□□□□□ -1.55
VPS41-205ENST00000414632 PPM1KQ8N3J5 372 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 TMEM145Q8NBT3 493 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 RNF149Q8NC42 400 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 RASSF8Q8NHQ8 419 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 PHOSPHO2Q8TCD6 241 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 LRRC15Q8TF66 581 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 GDPD5Q8WTR4 605 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 PSPC1Q8WXF1 523 aaKnown RBP5.38□□□□□ -1.55
VPS41-205ENST00000414632 PTPRN2Q92932 1015 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 LPPQ93052 612 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 TOP1MTQ969P6 601 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 CPB2Q96IY4 423 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 CDK5RAP3Q96JB5 506 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 MAGEB10Q96LZ2 347 aaPredicted RBP5.38□□□□□ -1.55
VPS41-205ENST00000414632 CLIC6Q96NY7 704 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 NACC1Q96RE7 527 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 YME1L1Q96TA2 773 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 RAD9AQ99638 391 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 JPH2Q9BR39 696 aaPredicted RBP5.38□□□□□ -1.55
VPS41-205ENST00000414632 KIFC3Q9BVG8 833 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 CEP41Q9BYV8 373 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 GCOM2Q9BZD3 368 aaPredicted RBP5.38□□□□□ -1.55
VPS41-205ENST00000414632 RAB34Q9BZG1 259 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 CSRNP2Q9H175 543 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 IFT122Q9HBG6 1241 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 GFOD1Q9NXC2 390 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 PIN4Q9Y237 131 aaKnown RBP5.38□□□□□ -1.55
VPS41-205ENST00000414632 XIRP2A4UGR9 3374 aa5.37□□□□□ -1.55
VPS41-205ENST00000414632 PDCD11Q14690 1871 aaKnown RBP5.37□□□□□ -1.55
VPS41-205ENST00000414632 SPTBN5Q9NRC6 3674 aaKnown RBP5.37□□□□□ -1.55
VPS41-205ENST00000414632 INO80B-WBP1J3KQ70 363 aa5.37□□□□□ -1.55
VPS41-205ENST00000414632 PIK3R2O00459 728 aa5.37□□□□□ -1.55
VPS41-205ENST00000414632 OPA1O60313 960 aa5.37□□□□□ -1.55
VPS41-205ENST00000414632 EDN1P05305 212 aa5.37□□□□□ -1.55
VPS41-205ENST00000414632 ZSCAN22P10073 491 aaPredicted RBP5.37□□□□□ -1.55
VPS41-205ENST00000414632 ZSCAN20P17040 1043 aaPredicted RBP5.37□□□□□ -1.55
VPS41-205ENST00000414632 SFPQP23246 707 aaKnown RBP eCLIP5.37□□□□□ -1.55
VPS41-205ENST00000414632 ARL2P36404 184 aa5.37□□□□□ -1.55
VPS41-205ENST00000414632 ECI1P42126 302 aa5.37□□□□□ -1.55
VPS41-205ENST00000414632 SARSP49591 514 aaKnown RBP5.37□□□□□ -1.55
VPS41-205ENST00000414632 GUCY2FP51841 1108 aa5.37□□□□□ -1.55
VPS41-205ENST00000414632 HTRA4P83105 476 aaPredicted RBP5.37□□□□□ -1.55
VPS41-205ENST00000414632 BTG3Q14201 252 aaPredicted RBP5.37□□□□□ -1.55
VPS41-205ENST00000414632 ADGRE1Q14246 886 aa5.37□□□□□ -1.55
VPS41-205ENST00000414632 PDIA5Q14554 519 aa5.37□□□□□ -1.55
VPS41-205ENST00000414632 ZNF460Q14592 562 aa5.37□□□□□ -1.55
VPS41-205ENST00000414632 STK38Q15208 465 aa5.37□□□□□ -1.55
VPS41-205ENST00000414632 PTPAQ15257 358 aa5.37□□□□□ -1.55
VPS41-205ENST00000414632 TWF2Q6IBS0 349 aaKnown RBP5.37□□□□□ -1.55
VPS41-205ENST00000414632 ZNF410Q86VK4 478 aa5.37□□□□□ -1.55
VPS41-205ENST00000414632 SVOPQ8N4V2 548 aa5.37□□□□□ -1.55
VPS41-205ENST00000414632 USP38Q8NB14 1042 aa5.37□□□□□ -1.55
VPS41-205ENST00000414632 TCP11Q8WWU5 503 aa5.37□□□□□ -1.55
VPS41-205ENST00000414632 EPSTI1Q96J88 318 aa5.37□□□□□ -1.55
VPS41-205ENST00000414632 YIPF2Q9BWQ6 316 aa5.37□□□□□ -1.55
VPS41-205ENST00000414632 FTHL17Q9BXU8 183 aa5.37□□□□□ -1.55
VPS41-205ENST00000414632 PANK2Q9BZ23 570 aa5.37□□□□□ -1.55
VPS41-205ENST00000414632 INO80BQ9C086 356 aaPredicted RBP5.37□□□□□ -1.55
VPS41-205ENST00000414632 RGS18Q9NS28 235 aa5.37□□□□□ -1.55
VPS41-205ENST00000414632 FBXO2Q9UK22 296 aaPredicted RBP5.37□□□□□ -1.55
VPS41-205ENST00000414632 DBR1Q9UK59 544 aaKnown RBP5.37□□□□□ -1.55
VPS41-205ENST00000414632 MKL2Q9ULH7 1088 aa5.37□□□□□ -1.55
VPS41-205ENST00000414632 TPX2Q9ULW0 747 aaKnown RBP5.37□□□□□ -1.55
VPS41-205ENST00000414632 GPR55Q9Y2T6 319 aaPredicted RBP5.37□□□□□ -1.55
VPS41-205ENST00000414632 INSL6Q9Y581 213 aa5.37□□□□□ -1.55
VPS41-205ENST00000414632 PCDHB7Q9Y5E2 793 aa5.37□□□□□ -1.55
VPS41-205ENST00000414632 SQORQ9Y6N5 450 aa5.37□□□□□ -1.55
VPS41-205ENST00000414632 ADGRA3Q8IWK6 1321 aa5.37□□□□□ -1.55
VPS41-205ENST00000414632 ANK1P16157 1881 aa5.37□□□□□ -1.55
VPS41-205ENST00000414632 CITO14578 2027 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 PRRC2BQ5JSZ5 2229 aaKnown RBP5.36□□□□□ -1.55
VPS41-205ENST00000414632 TMEM265A0A087WTH1 108 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 TBKBP1A7MCY6 615 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 B4GALT5O43286 388 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 TSPAN1O60635 241 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 HIP1RO75146 1068 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 DGKIO75912 1065 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 ERLIN2O94905 339 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 NPTXRO95502 500 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 EOMESO95936 686 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 CPP00450 1065 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 SCG5P05408 212 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 PLA2G4BP0C869 781 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 JMJD7P0C870 316 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 CYP11B2P19099 503 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms