RNA–Protein interactions for RNA: ENST00000414435.1

AC004000.1-201, humanhuman

TSL 5 BASIC

Gene AC004000.1, Length 433 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004000.1-201ENST00000414435 NELL2Q99435 816 aa12.5□□□□□ -0.41
AC004000.1-201ENST00000414435 MRPL45Q9BRJ2 306 aaKnown RBP12.5□□□□□ -0.41
AC004000.1-201ENST00000414435 SLC46A2Q9BY10 475 aa12.5□□□□□ -0.41
AC004000.1-201ENST00000414435 OSBPL6Q9BZF3 934 aa12.5□□□□□ -0.41
AC004000.1-201ENST00000414435 SMG9Q9H0W8 520 aaKnown RBP12.5□□□□□ -0.41
AC004000.1-201ENST00000414435 SPATA6Q9NWH7 488 aaPredicted RBP12.5□□□□□ -0.41
AC004000.1-201ENST00000414435 MAGEC2Q9UBF1 373 aaPredicted RBP12.5□□□□□ -0.41
AC004000.1-201ENST00000414435 CDH9Q9ULB4 789 aa12.5□□□□□ -0.41
AC004000.1-201ENST00000414435 NDRG2Q9UN36 371 aaKnown RBP12.5□□□□□ -0.41
AC004000.1-201ENST00000414435 MAPK8IP1Q9UQF2 711 aa12.5□□□□□ -0.41
AC004000.1-201ENST00000414435 PIAS3Q9Y6X2 628 aa12.5□□□□□ -0.41
AC004000.1-201ENST00000414435 RIF1Q5UIP0 2472 aaKnown RBP12.5□□□□□ -0.41
AC004000.1-201ENST00000414435 VPS13AQ96RL7 3174 aa12.5□□□□□ -0.41
AC004000.1-201ENST00000414435 USP34Q70CQ2 3546 aa12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 SLC38A8A6NNN8 435 aa12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 MAN2B1O00754 1011 aa12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 CHADO15335 359 aa12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 NCAM2O15394 837 aa12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 CALUO43852 315 aaPredicted RBP12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 GFRA3O60609 400 aa12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 RHOBTB3O94955 611 aa12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 PRAMEF12O95522 483 aa12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 F11P03951 625 aa12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 BDNFP23560 247 aa12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 TARSP26639 723 aaKnown RBP12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 ATICP31939 592 aa12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 AVPR1AP37288 418 aa12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 GRIK1P39086 918 aa12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 KPNA1P52294 538 aaPredicted RBP12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 AP3M2P53677 418 aa12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 FCHO2Q0JRZ9 810 aa12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 MAPRE1Q15691 268 aaKnown RBP12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 CFAP221Q4G0U5 840 aa12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 MDH1BQ5I0G3 518 aa12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 TDRD10Q5VZ19 366 aaKnown RBP12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 CEP135Q66GS9 1140 aa12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 TXNDC8Q6A555 127 aa12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 FAM171BQ6P995 826 aa12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 TMEM150AQ86TG1 271 aa12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 SLC9A9Q8IVB4 645 aa12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 CMTM8Q8IZV2 173 aa12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 TTC8Q8TAM2 541 aa12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 MRPS31Q92665 395 aaKnown RBP12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 MYLPFQ96A32 169 aa12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 SYAP1Q96A49 352 aaPredicted RBP12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 FUBP3Q96I24 572 aaKnown RBP eCLIP12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 ZFYVE19Q96K21 471 aa12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 LRRC3BQ96PB8 259 aa12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 CRTAC1Q9NQ79 661 aa12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 TRPV5Q9NQA5 729 aa12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 DMAC2Q9NW81 257 aa12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 UXTQ9UBK9 157 aaPredicted RBP12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 FRMD4BQ9Y2L6 1034 aa12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 PTPRZ1P23471 2315 aaPredicted RBP12.49□□□□□ -0.41
AC004000.1-201ENST00000414435 MYO15AQ9UKN7 3530 aa12.48□□□□□ -0.41
AC004000.1-201ENST00000414435 SHISA7A6NL88 538 aa12.48□□□□□ -0.41
AC004000.1-201ENST00000414435 A8MXQ7 604 aa12.48□□□□□ -0.41
AC004000.1-201ENST00000414435 LAMTOR5O43504 91 aa12.48□□□□□ -0.41
AC004000.1-201ENST00000414435 TACC1O75410 805 aa12.48□□□□□ -0.41
AC004000.1-201ENST00000414435 MAGEA11P43364 429 aa12.48□□□□□ -0.41
AC004000.1-201ENST00000414435 DLG4P78352 724 aa12.48□□□□□ -0.41
AC004000.1-201ENST00000414435 NUCB2P80303 420 aa12.48□□□□□ -0.41
AC004000.1-201ENST00000414435 NCOA4Q13772 614 aa12.48□□□□□ -0.41
AC004000.1-201ENST00000414435 ZNF699Q32M78 642 aa12.48□□□□□ -0.41
AC004000.1-201ENST00000414435 ARHGAP29Q52LW3 1261 aa12.48□□□□□ -0.41
AC004000.1-201ENST00000414435 CELF5Q8N6W0 485 aaKnown RBP12.48□□□□□ -0.41
AC004000.1-201ENST00000414435 TTC16Q8NEE8 873 aa12.48□□□□□ -0.41
AC004000.1-201ENST00000414435 MYCBPAPQ8TBZ2 947 aa12.48□□□□□ -0.41
AC004000.1-201ENST00000414435 BPIFB1Q8TDL5 484 aa12.48□□□□□ -0.41
AC004000.1-201ENST00000414435 FAM3CQ92520 227 aa12.48□□□□□ -0.41
AC004000.1-201ENST00000414435 ELMO3Q96BJ8 720 aa12.48□□□□□ -0.41
AC004000.1-201ENST00000414435 CCDC34Q96HJ3 373 aa12.48□□□□□ -0.41
AC004000.1-201ENST00000414435 PCED1BQ96HM7 432 aa12.48□□□□□ -0.41
AC004000.1-201ENST00000414435 XYLT2Q9H1B5 865 aa12.48□□□□□ -0.41
AC004000.1-201ENST00000414435 TRPC7Q9HCX4 862 aa12.48□□□□□ -0.41
AC004000.1-201ENST00000414435 THG1LQ9NWX6 298 aaKnown RBP12.48□□□□□ -0.41
AC004000.1-201ENST00000414435 OBP2AQ9NY56 170 aa12.48□□□□□ -0.41
AC004000.1-201ENST00000414435 ZMYM5Q9UJ78 669 aa12.48□□□□□ -0.41
AC004000.1-201ENST00000414435 CACNA1IQ9P0X4 2223 aa12.47□□□□□ -0.41
AC004000.1-201ENST00000414435 PROB1E7EW31 1015 aa12.47□□□□□ -0.41
AC004000.1-201ENST00000414435 ARNTLO00327 626 aa12.47□□□□□ -0.41
AC004000.1-201ENST00000414435 NOL4O94818 638 aa12.47□□□□□ -0.41
AC004000.1-201ENST00000414435 VNN1O95497 513 aa12.47□□□□□ -0.41
AC004000.1-201ENST00000414435 STAU1O95793 577 aaKnown RBP12.47□□□□□ -0.41
AC004000.1-201ENST00000414435 C4BPAP04003 597 aaKnown RBP12.47□□□□□ -0.41
AC004000.1-201ENST00000414435 FAM163BP0C2L3 166 aa12.47□□□□□ -0.41
AC004000.1-201ENST00000414435 SP9P0CG40 484 aa12.47□□□□□ -0.41
AC004000.1-201ENST00000414435 PTPN1P18031 435 aaKnown RBP12.47□□□□□ -0.41
AC004000.1-201ENST00000414435 NR2F2P24468 414 aa12.47□□□□□ -0.41
AC004000.1-201ENST00000414435 CCNE1P24864 410 aa12.47□□□□□ -0.41
AC004000.1-201ENST00000414435 DDX6P26196 483 aaKnown RBP eCLIP12.47□□□□□ -0.41
AC004000.1-201ENST00000414435 ANXA13P27216 316 aa12.47□□□□□ -0.41
AC004000.1-201ENST00000414435 WEE1P30291 646 aa12.47□□□□□ -0.41
AC004000.1-201ENST00000414435 SOX9P48436 509 aa12.47□□□□□ -0.41
AC004000.1-201ENST00000414435 CLDN10P78369 228 aa12.47□□□□□ -0.41
AC004000.1-201ENST00000414435 PNOCQ13519 176 aa12.47□□□□□ -0.41
AC004000.1-201ENST00000414435 ZNF667Q5HYK9 610 aa12.47□□□□□ -0.41
AC004000.1-201ENST00000414435 VSTM1Q6UX27 236 aa12.47□□□□□ -0.41
AC004000.1-201ENST00000414435 SCARA5Q6ZMJ2 495 aa12.47□□□□□ -0.41
AC004000.1-201ENST00000414435 ASCL5Q7RTU5 278 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms