RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 ELMO2Q96JJ3 720 aa18.01■□□□□ 0.47
PHRF1-202ENST00000413872 C20orf96Q9NUD7 363 aaPredicted RBP18.01■□□□□ 0.47
PHRF1-202ENST00000413872 RRN3Q9NYV6 651 aa18.01■□□□□ 0.47
PHRF1-202ENST00000413872 DOLKQ9UPQ8 538 aa18.01■□□□□ 0.47
PHRF1-202ENST00000413872 ZNF185O15231 689 aa18.01■□□□□ 0.47
PHRF1-202ENST00000413872 KCNA1Q09470 495 aa18.01■□□□□ 0.47
PHRF1-202ENST00000413872 GRAMD1BQ3KR37 738 aa18.01■□□□□ 0.47
PHRF1-202ENST00000413872 OTOP1Q7RTM1 612 aa18.01■□□□□ 0.47
PHRF1-202ENST00000413872 SLC13A5Q86YT5 568 aaPredicted RBP18.01■□□□□ 0.47
PHRF1-202ENST00000413872 ATXN7L3BQ96GX2 97 aa18.01■□□□□ 0.47
PHRF1-202ENST00000413872 IRX2Q9BZI1 471 aaPredicted RBP18.01■□□□□ 0.47
PHRF1-202ENST00000413872 ATP11BQ9Y2G3 1177 aa18.01■□□□□ 0.47
PHRF1-202ENST00000413872 SNRPAP09012 282 aaKnown RBP18.01■□□□□ 0.47
PHRF1-202ENST00000413872 FKBP1BP68106 108 aa18.01■□□□□ 0.47
PHRF1-202ENST00000413872 PCSK7Q16549 785 aa18.01■□□□□ 0.47
PHRF1-202ENST00000413872 ACKR2O00590 384 aa18■□□□□ 0.47
PHRF1-202ENST00000413872 PRPF4O43172 522 aaKnown RBP eCLIP18■□□□□ 0.471e-6■■□□□ 11.8
PHRF1-202ENST00000413872 MBL2P11226 248 aaPredicted RBP18■□□□□ 0.47
PHRF1-202ENST00000413872 TM4SF1P30408 202 aa18■□□□□ 0.47
PHRF1-202ENST00000413872 PTPN11Q06124 597 aaPredicted RBP18■□□□□ 0.47
PHRF1-202ENST00000413872 BST2Q10589 180 aaKnown RBP18■□□□□ 0.47
PHRF1-202ENST00000413872 SMTNL2Q2TAL5 461 aa18■□□□□ 0.47
PHRF1-202ENST00000413872 HOMEZQ8IX15 550 aa18■□□□□ 0.47
PHRF1-202ENST00000413872 ZNF507Q8TCN5 953 aa18■□□□□ 0.47
PHRF1-202ENST00000413872 THOC1Q96FV9 657 aaKnown RBP18■□□□□ 0.47
PHRF1-202ENST00000413872 CNPY3Q9BT09 278 aa18■□□□□ 0.47
PHRF1-202ENST00000413872 MYPNQ86TC9 1320 aa18■□□□□ 0.47
PHRF1-202ENST00000413872 PSEN2P49810 448 aa18■□□□□ 0.47
PHRF1-202ENST00000413872 MCL1Q07820 350 aa18■□□□□ 0.47
PHRF1-202ENST00000413872 EFL1Q7Z2Z2 1120 aaKnown RBP18■□□□□ 0.47
PHRF1-202ENST00000413872 CPB2Q96IY4 423 aa18■□□□□ 0.47
PHRF1-202ENST00000413872 L3MBTL3Q96JM7 780 aaPredicted RBP18■□□□□ 0.47
PHRF1-202ENST00000413872 THAP2Q9H0W7 228 aa18■□□□□ 0.47
PHRF1-202ENST00000413872 HNRNPCL1O60812 293 aaKnown RBP18■□□□□ 0.47
PHRF1-202ENST00000413872 CKMP06732 381 aa18■□□□□ 0.47
PHRF1-202ENST00000413872 EEF1B2P24534 225 aaKnown RBP18■□□□□ 0.47
PHRF1-202ENST00000413872 CASP4P49662 377 aa18■□□□□ 0.47
PHRF1-202ENST00000413872 VGLL4Q14135 290 aa18■□□□□ 0.47
PHRF1-202ENST00000413872 SEMA6BQ9H3T3 888 aa18■□□□□ 0.47
PHRF1-202ENST00000413872 A1CFQ9NQ94 594 aaKnown RBP18■□□□□ 0.47
PHRF1-202ENST00000413872 AAR2Q9Y312 384 aaKnown RBP18■□□□□ 0.47
PHRF1-202ENST00000413872 VSNL1P62760 191 aa18■□□□□ 0.47
PHRF1-202ENST00000413872 MLXIPLQ9NP71 852 aa18■□□□□ 0.47
PHRF1-202ENST00000413872 CISHQ9NSE2 258 aa18■□□□□ 0.47
PHRF1-202ENST00000413872 FRMPD4Q14CM0 1322 aa18■□□□□ 0.47
PHRF1-202ENST00000413872 STX7O15400 261 aaKnown RBP17.99■□□□□ 0.47
PHRF1-202ENST00000413872 SGPL1O95470 568 aa17.99■□□□□ 0.47
PHRF1-202ENST00000413872 COILP38432 576 aaPredicted RBP17.99■□□□□ 0.47
PHRF1-202ENST00000413872 MAGEA4P43358 317 aa17.99■□□□□ 0.47
PHRF1-202ENST00000413872 CATSPERGQ6ZRH7 1159 aa17.99■□□□□ 0.47
PHRF1-202ENST00000413872 TRAF3IP3Q9Y228 551 aa17.99■□□□□ 0.47
PHRF1-202ENST00000413872 ARHGAP10A1A4S6 786 aa17.99■□□□□ 0.47
PHRF1-202ENST00000413872 RAG1P15918 1043 aa17.99■□□□□ 0.47
PHRF1-202ENST00000413872 AMPD2Q01433 879 aa17.99■□□□□ 0.47
PHRF1-202ENST00000413872 TTLL9Q3SXZ7 439 aa17.99■□□□□ 0.47
PHRF1-202ENST00000413872 MMGT1Q8N4V1 131 aa17.99■□□□□ 0.47
PHRF1-202ENST00000413872 WDR18Q9BV38 432 aa17.99■□□□□ 0.47
PHRF1-202ENST00000413872 FHDC1Q9C0D6 1143 aaPredicted RBP17.99■□□□□ 0.47
PHRF1-202ENST00000413872 SYF2O95926 243 aaKnown RBP17.99■□□□□ 0.47
PHRF1-202ENST00000413872 PLD1Q13393 1074 aa17.99■□□□□ 0.47
PHRF1-202ENST00000413872 AMHR2Q16671 573 aa17.99■□□□□ 0.47
PHRF1-202ENST00000413872 UGT3A1Q6NUS8 523 aa17.99■□□□□ 0.47
PHRF1-202ENST00000413872 SV2AQ7L0J3 742 aa17.99■□□□□ 0.47
PHRF1-202ENST00000413872 SLFN11Q7Z7L1 901 aa17.99■□□□□ 0.47
PHRF1-202ENST00000413872 C9orf72Q96LT7 481 aa17.99■□□□□ 0.47
PHRF1-202ENST00000413872 FAM198AQ9UFP1 575 aa17.99■□□□□ 0.47
PHRF1-202ENST00000413872 ADCY3O60266 1144 aa17.99■□□□□ 0.47
PHRF1-202ENST00000413872 FSCN1Q16658 493 aaKnown RBP17.99■□□□□ 0.47
PHRF1-202ENST00000413872 TMEM119Q4V9L6 283 aa17.99■□□□□ 0.47
PHRF1-202ENST00000413872 PAN2Q504Q3 1202 aaKnown RBP17.99■□□□□ 0.47
PHRF1-202ENST00000413872 AARS2Q5JTZ9 985 aaKnown RBP17.99■□□□□ 0.47
PHRF1-202ENST00000413872 PRUNE1Q86TP1 453 aa17.99■□□□□ 0.47
PHRF1-202ENST00000413872 TAS1R2Q8TE23 839 aa17.99■□□□□ 0.47
PHRF1-202ENST00000413872 SLC4A9Q96Q91 983 aa17.99■□□□□ 0.47
PHRF1-202ENST00000413872 SPATA16Q9BXB7 569 aa17.99■□□□□ 0.47
PHRF1-202ENST00000413872 RBM12Q9NTZ6 932 aaKnown RBP17.99■□□□□ 0.47
PHRF1-202ENST00000413872 CHMP2BQ9UQN3 213 aa17.99■□□□□ 0.47
PHRF1-202ENST00000413872 TRPV2Q9Y5S1 764 aa17.99■□□□□ 0.47
PHRF1-202ENST00000413872 ARL4DP49703 201 aa17.98■□□□□ 0.47
PHRF1-202ENST00000413872 ATN1P54259 1190 aaPredicted RBP17.98■□□□□ 0.47
PHRF1-202ENST00000413872 CCNI2Q6ZMN8 369 aaPredicted RBP17.98■□□□□ 0.47
PHRF1-202ENST00000413872 NLRP14Q86W24 1093 aa17.98■□□□□ 0.47
PHRF1-202ENST00000413872 NAT9Q9BTE0 207 aa17.98■□□□□ 0.47
PHRF1-202ENST00000413872 IPPQ9Y573 584 aa17.98■□□□□ 0.47
PHRF1-202ENST00000413872 SLITRK3O94933 977 aa17.98■□□□□ 0.47
PHRF1-202ENST00000413872 RHBDL3P58872 404 aa17.98■□□□□ 0.47
PHRF1-202ENST00000413872 MYL6P60660 151 aa17.98■□□□□ 0.47
PHRF1-202ENST00000413872 SLC25A41Q8N5S1 370 aa17.98■□□□□ 0.47
PHRF1-202ENST00000413872 DNAJB3Q8WWF6 145 aa17.98■□□□□ 0.47
PHRF1-202ENST00000413872 OTUB1Q96FW1 271 aaPredicted RBP17.98■□□□□ 0.47
PHRF1-202ENST00000413872 EMILIN2Q9BXX0 1053 aa17.98■□□□□ 0.47
PHRF1-202ENST00000413872 SCOCQ9UIL1 159 aa17.98■□□□□ 0.47
PHRF1-202ENST00000413872 DISP2A7MBM2 1401 aa17.98■□□□□ 0.47
PHRF1-202ENST00000413872 A0A0A6YYK5 440 aaPredicted RBP17.98■□□□□ 0.47
PHRF1-202ENST00000413872 AKAP3O75969 853 aa17.98■□□□□ 0.47
PHRF1-202ENST00000413872 CD44P16070 742 aaKnown RBP17.98■□□□□ 0.47
PHRF1-202ENST00000413872 C1orf146Q5VVC0 180 aa17.98■□□□□ 0.47
PHRF1-202ENST00000413872 STAMBPL1Q96FJ0 436 aa17.98■□□□□ 0.47
PHRF1-202ENST00000413872 ISCUQ9H1K1 167 aa17.98■□□□□ 0.47
PHRF1-202ENST00000413872 FBXO44Q9H4M3 255 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms