RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 SUSD3Q96L08 255 aa8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 SPATA32Q96LK8 384 aa8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 CCDC94Q9BW85 323 aaPredicted RBP8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 DNAJC25Q9H1X3 360 aa8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 TSPAN10Q9H1Z9 355 aaPredicted RBP8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 CRISPLD1Q9H336 500 aa8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 ZHX3Q9H4I2 956 aa8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 SLITRK6Q9H5Y7 841 aa8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 TRPV4Q9HBA0 871 aa8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 PTPRHQ9HD43 1115 aa8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 SLC38A7Q9NVC3 462 aa8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 CNTN3Q9P232 1028 aa8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 TUBGCP4Q9UGJ1 667 aa8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 AFF4Q9UHB7 1163 aaKnown RBP8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 RALYQ9UKM9 306 aaKnown RBP8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 ZDHHC9Q9Y397 364 aa8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 NUB1Q9Y5A7 615 aa8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 HELZP42694 1942 aaKnown RBP8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 NPHP3-ACAD11A0A0J9YXS1 232 aa8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 A0A1W2PRU2 124 aa8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 SPECC1L-ADORA2AF8WAN1 911 aa8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 SCAMP3O14828 347 aaKnown RBP8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 PAPSS2O95340 614 aaPredicted RBP8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 STAU1O95793 577 aaKnown RBP8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 KCNE1P15382 129 aa8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 PMLP29590 882 aa8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 NPTX2P47972 431 aa8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 SMTNP53814 917 aa8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 PEX3P56589 373 aa8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 NUCB2P80303 420 aa8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 ARID5BQ14865 1188 aa8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 SF3A2Q15428 464 aaKnown RBP8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 CCDC6Q16204 474 aa8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 ALKBH2Q6NS38 261 aa8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 C1orf186Q6ZWK4 172 aa8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 APBB1IPQ7Z5R6 666 aaPredicted RBP8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 LONP2Q86WA8 852 aa8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 MFSD6LQ8IWD5 586 aa8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 TTC9BQ8N6N2 239 aa8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 LEMD2Q8NC56 503 aa8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 TTC8Q8TAM2 541 aa8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 CSGALNACT1Q8TDX6 532 aa8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 LRRC15Q8TF66 581 aa8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 CHAMP1Q96JM3 812 aa8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 ZFYVE19Q96K21 471 aa8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 ZNF512Q96ME7 567 aaPredicted RBP8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 PGLYRP2Q96PD5 576 aa8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 ACO2Q99798 780 aaKnown RBP8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 REEP2Q9BRK0 252 aa8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 TARS2Q9BW92 718 aaKnown RBP8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 LRRC3Q9BY71 257 aa8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 MRPL4Q9BYD3 311 aaKnown RBP8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 PANK2Q9BZ23 570 aa8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 KMT5AQ9NQR1 393 aa8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 RXFP3Q9NSD7 469 aa8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 BLOC1S4Q9NUP1 217 aa8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 FAM13BQ9NYF5 915 aa8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 ARHGAP28Q9P2N2 729 aa8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 ODF2LQ9ULJ1 636 aa8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 ABCA7Q8IZY2 2146 aa8.95□□□□□ -0.98
UPF3AP1-201ENST00000413731 PTPRDP23468 1912 aa8.94□□□□□ -0.98
UPF3AP1-201ENST00000413731 ANAPC1Q9H1A4 1944 aa8.94□□□□□ -0.98
UPF3AP1-201ENST00000413731 THADAQ6YHU6 1953 aa8.94□□□□□ -0.98
UPF3AP1-201ENST00000413731 MYBPHLA2RUH7 354 aa8.94□□□□□ -0.98
UPF3AP1-201ENST00000413731 K7ENM7 598 aa8.94□□□□□ -0.98
UPF3AP1-201ENST00000413731 K7ERI5 159 aa8.94□□□□□ -0.98
UPF3AP1-201ENST00000413731 CHADO15335 359 aa8.94□□□□□ -0.98
UPF3AP1-201ENST00000413731 PRAMEF12O95522 483 aa8.94□□□□□ -0.98
UPF3AP1-201ENST00000413731 MCF2P10911 925 aa8.94□□□□□ -0.98
UPF3AP1-201ENST00000413731 PLS3P13797 630 aa8.94□□□□□ -0.98
UPF3AP1-201ENST00000413731 PROZP22891 400 aa8.94□□□□□ -0.98
UPF3AP1-201ENST00000413731 KPNA1P52294 538 aaPredicted RBP8.94□□□□□ -0.98
UPF3AP1-201ENST00000413731 FCHO2Q0JRZ9 810 aa8.94□□□□□ -0.98
UPF3AP1-201ENST00000413731 MAPK7Q13164 816 aa8.94□□□□□ -0.98
UPF3AP1-201ENST00000413731 PON2Q15165 354 aa8.94□□□□□ -0.98
UPF3AP1-201ENST00000413731 AASDHQ4L235 1098 aaPredicted RBP8.94□□□□□ -0.98
UPF3AP1-201ENST00000413731 SEZ6Q53EL9 994 aa8.94□□□□□ -0.98
UPF3AP1-201ENST00000413731 PKN3Q6P5Z2 889 aa8.94□□□□□ -0.98
UPF3AP1-201ENST00000413731 MPZL3Q6UWV2 235 aa8.94□□□□□ -0.98
UPF3AP1-201ENST00000413731 CEP68Q76N32 757 aa8.94□□□□□ -0.98
UPF3AP1-201ENST00000413731 YAF2Q8IY57 180 aa8.94□□□□□ -0.98
UPF3AP1-201ENST00000413731 DAW1Q8N136 415 aa8.94□□□□□ -0.98
UPF3AP1-201ENST00000413731 BEST2Q8NFU1 509 aa8.94□□□□□ -0.98
UPF3AP1-201ENST00000413731 DHX58Q96C10 678 aa8.94□□□□□ -0.98
UPF3AP1-201ENST00000413731 MSANTD3Q96H12 275 aa8.94□□□□□ -0.98
UPF3AP1-201ENST00000413731 LRRC3BQ96PB8 259 aa8.94□□□□□ -0.98
UPF3AP1-201ENST00000413731 SAP130Q9H0E3 1048 aa8.94□□□□□ -0.98
UPF3AP1-201ENST00000413731 C17orf75Q9HAS0 396 aa8.94□□□□□ -0.98
UPF3AP1-201ENST00000413731 PARVGQ9HBI0 331 aa8.94□□□□□ -0.98
UPF3AP1-201ENST00000413731 CYLDQ9NQC7 956 aa8.94□□□□□ -0.98
UPF3AP1-201ENST00000413731 GTSE1Q9NYZ3 720 aa8.94□□□□□ -0.98
UPF3AP1-201ENST00000413731 LARSQ9P2J5 1176 aaKnown RBP8.94□□□□□ -0.98
UPF3AP1-201ENST00000413731 ANKFY1Q9P2R3 1169 aa8.94□□□□□ -0.98
UPF3AP1-201ENST00000413731 KCNG1Q9UIX4 513 aa8.94□□□□□ -0.98
UPF3AP1-201ENST00000413731 PCDHA7Q9UN72 937 aa8.94□□□□□ -0.98
UPF3AP1-201ENST00000413731 TIMM13Q9Y5L4 95 aaPredicted RBP8.94□□□□□ -0.98
UPF3AP1-201ENST00000413731 IGF2RP11717 2491 aa8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 BAHCC1Q9P281 2608 aa8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 FRYQ5TBA9 3013 aa8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 A0A087X0B3 334 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms